prot_P-wetherbeei_contig13841.2.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13841.2.2
Unique Nameprot_P-wetherbeei_contig13841.2.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length201
Homology
BLAST of mRNA_P-wetherbeei_contig13841.2.2 vs. uniprot
Match: A0A6H5JKS8_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKS8_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 3.820e-40
Identity = 88/215 (40.93%), Postives = 102/215 (47.44%), Query Frame = 0
Query:    4 GDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLERALRMRMVDTAGGPLSGXXXXXXXXXXXXXXSRAINYHFLNRHLLWDSFTKMLLFLAPLIDWGAARRQEEG-------ESAAEGEXXXXXXXXXXXXXXXXXXSGRPAA-----------CGACGRAPASMPYATDCGHVFCYFCLRAACARDPNYACAICGAHFAASRRWVVPR 200
            G  R   W  L R E  +R  W++NLLLFL++G Y TP++R +RMRMV     P                  R INY FLNR LLWD + KM   +APLI+WG  RR   G       E+ A G                      PAA           C  CG  PA  PY T CGHVFCY+C R AC  DP YAC  CG +FA SRRW  PR
Sbjct:  235 GRARRVAWHVLGRLETLFRLAWMVNLLLFLKSGKYATPVDRLVRMRMVHDRADP----------------GPRPINYQFLNRRLLWDHWAKMAYVVAPLINWGFVRRAVSGGAGRLRREARAFGIFGGSSGGAGRVSARGLGADTAPAAEAAVAEVVLTACAECGANPAKTPYVTGCGHVFCYYCARVACTVDPRYACPRCGEYFATSRRWSQPR 433          
BLAST of mRNA_P-wetherbeei_contig13841.2.2 vs. uniprot
Match: W7TYI4_9STRA (Peroxin-2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYI4_9STRA)

HSP 1 Score: 147 bits (372), Expect = 5.830e-39
Identity = 80/199 (40.20%), Postives = 108/199 (54.27%), Query Frame = 0
Query:    1 RPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLERALRMRMVDTAGGPLSGXXXXXXXXXXXXXXSRAINYHFLNRHLLWDSFTKMLLFLAPLIDWGAARRQEEG--ESAAEGEXXXXXXXXXXXXXXXXXXSGRPAACGACGRAPASMPYATDCGHVFCYFCLRAACARDPNYACAICGAHFAASRRWV 197
            R  G W+   +RAL RAE+ +R  WL+N L+FLR G+YP+ L+R + MR+V    GP SG              +R IN+ F+NR LLW+ FT++ L + PL+DW   RRQ  G       G       XX          +     C  CG   A  PY TDCGH++CY+CL+ AC +D +++C  CG  FA SRRWV
Sbjct:  249 RGGGQWKRRAYRALTRAESLFRLAWLINFLVFLRVGSYPSLLQRLVGMRLVY---GPSSGGA------------ARNINFQFMNRQLLWEHFTQLALCVVPLVDWDGLRRQVSGLIRQRRAGAWAAGAGXXGGSEFRGAGGADGDMECVVCGEESAQTPYVTDCGHIYCYYCLKTACLQDDSFSCPRCGTFFATSRRWV 432          
BLAST of mRNA_P-wetherbeei_contig13841.2.2 vs. uniprot
Match: A0A1D2A1X3_AUXPR (Pex2_Pex12 domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A1X3_AUXPR)

HSP 1 Score: 101 bits (252), Expect = 5.460e-22
Identity = 69/190 (36.32%), Postives = 87/190 (45.79%), Query Frame = 0
Query:    3 DGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLERALRMRMVDTAGGPLSGXXXXXXXXXXXXXXSRAINYHFLNRHLLWDSFTKMLLFLAPLIDWGAARRQEEG---ESAAEGEXXXXXXXXXXXXXXXXXXSGRPAACGACGRA-PASMPYAT-DCGHVFCYFCLRAACARDPNYACAICG 187
            DG WR   W+ +RRAE AYR   L+N + FLR G Y T LER +  R V                        RAI+Y +LNR L+W   +++LLF+ PL +  + +R       + AA G                   SGR  ACG CG A P   P A   CGHV CY+CLRA    D    C +CG
Sbjct:  184 DGGWRATAWQVMRRAETAYRLAALVNAIAFLRAGKYRTLLERLIGARPV-----------------YVQTHAPRAISYEYLNRQLVWGELSELLLFVLPLFNLASVKRSLRRLLPQPAARG-----------------GASGRQTACGTCGAAFPLLTPAAALPCGHVHCYYCLRARTQADALCECGVCG 339          
BLAST of mRNA_P-wetherbeei_contig13841.2.2 vs. uniprot
Match: A0A835Z8Z6_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z6_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.390e-21
Identity = 74/184 (40.22%), Postives = 82/184 (44.57%), Query Frame = 0
Query:   10 VWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLERALRMRMVDTAGGPLSGXXXXXXXXXXXXXXSRAINYHFLNRHLLWDSFTKMLLFLAPLIDWGAARRQEEGESAAEGEXXXXXXXXXXXXXXXXXXSGRPAACGACGRAPASMPYATDCGHVFCYFCLRAACARDPNYACAICGAHFAAS 193
             W  L  A  AYR  WLLN L FLR   YPTPL+RALR+RMV  A    +                R INY FL+R LLW+                             G    XXXXXXXXXXX          C  CG   A  PY  DCGH FCY+C+R  C  D  Y C  CGA FAA+
Sbjct:  108 AWAVLAHAHRAYRVAWLLNCLAFLRGARYPTPLDRALRLRMVAAAAAATAAP--------------RPINYAFLSRRLLWEHAAAXXXXXXXXXXXXXXXXXXXXXXRRLGVRAGXXXXXXXXXXXE-------GGCVECGALRARQPYVADCGHTFCYYCVRVGCEDDAEYGCPACGARFAAA 270          
BLAST of mRNA_P-wetherbeei_contig13841.2.2 vs. uniprot
Match: A0A0L0HLU8_SPIPD (Peroxin-2 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HLU8_SPIPD)

HSP 1 Score: 97.1 bits (240), Expect = 2.190e-20
Identity = 63/191 (32.98%), Postives = 93/191 (48.69%), Query Frame = 0
Query:    2 PDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLERALRMRMVDTAGGPLSGXXXXXXXXXXXXXXSRAINYHFLNRHLLWDSFTKMLLFLAPLIDWGAARRQEEGESAAEGEXXXXXXXXXXXXXXXXXXSGRPAACGACGR--APASM---PYATDCGHVFCYFCLRAACARDPNYACAICG 187
            P+ DWR+ VW  L++AE  YRAL L+N L+FL  G Y + L+R LRMR+V T                     +R +++ F+NR L+W +FT+ LLFL PL++    R +     A  G                         C  C    AP ++   PY T+CGHV+CY+C++ +   D ++ C  CG
Sbjct:  198 PERDWRNRVWTYLQKAENVYRALSLVNFLVFLYNGRYRSLLDRVLRMRLVYTR-----------------REMARQVSFEFMNRQLVWHAFTEFLLFLVPLVN--VERIKNTIIRAISGPVTVDLPDHI---------------CAICHAKDAPKTVVHTPYRTNCGHVYCYYCIKTSIMADHSFPCPRCG 354          
BLAST of mRNA_P-wetherbeei_contig13841.2.2 vs. uniprot
Match: UPI00064503DB (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064503DB)

HSP 1 Score: 94.0 bits (232), Expect = 2.770e-19
Identity = 62/215 (28.84%), Postives = 88/215 (40.93%), Query Frame = 0
Query:    2 PDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLERALRMRMVDTAGGPLSGXXXXXXXXXXXXXXSRAINYHFLNRHLLWDSFTKMLLFLAPLID-------------------WGAARRQEEGESAAEGEXXXXXXXXXXXXXXXXXXSGRPAACGACGRAPASMPYATDCGHVFCYFCLRAACARDPNYACAICGAHFAASRRWV 197
            PD   +  VWR L   E  Y+ L +LN L FL  G Y T + R L MR+V                       SR I++ ++NR L+W  FT+  LF+ PLI+                   +    R ++GE AA                           C  C   P S+PY TDCGH+FCY+C++  C  DP + C  C +  +  +R+ 
Sbjct:  153 PDDSLKKRVWRILNHLETVYKLLSILNFLAFLFDGKYVTLVNRILCMRLV-----------------YAQPSLSRRISFEYMNRQLVWHGFTEFFLFIMPLINIDRIKGFIYRTFIQKPSNMFQQQNRSQQGEDAALAPQLLAPLVLEK--------------CPICFNDPISVPYITDCGHLFCYYCIKTNCMIDPTFTCPRCNSIVSNMKRFT 336          
BLAST of mRNA_P-wetherbeei_contig13841.2.2 vs. uniprot
Match: PEX2_DICDI (Peroxisome biogenesis factor 2 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=PEX2_DICDI)

HSP 1 Score: 93.2 bits (230), Expect = 9.120e-19
Identity = 80/207 (38.65%), Postives = 109/207 (52.66%), Query Frame = 0
Query:    2 PDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLERALRMRMVDTAGGPLSGXXXXXXXXXXXXXXSRAINYHFLNRHLLWDSFTKMLLFLAPLIDWGAAR--------RQEEGESAAEGEXXXXXXXXXXXXXXXXXXSGRPAA--CGACGRAPASMPYATDCGHVFCYFCLRAACARDPNYACAICGAHFAASRRWVV 198
            P  D R   W  L  AE+AY+AL LLN L FL  G Y T + R L MR+V                       SR I++ ++NR L+W  FT+ +LF+ PLI+    +        +   G S+    XXXXXXXXXXXXXXXXXX    A   C  C   P SMPY+ DCGH+FCY+C++ +C  D ++ C  C +  +  +R+ +
Sbjct:  232 PPNDIRKKFWNFLNFAESAYKALALLNFLTFLFNGKYVTLVNRILHMRLV-----------------YAHPTLSRNISFEYMNRLLVWHGFTEFILFIMPLINIDRIKSFLYRLLVKTSFGNSSGXXXXXXXXXXXXXXXXXXXXXXXXMALAKCPICMNDPISMPYSADCGHLFCYYCIKTSCMIDSSFTCPRCNSLISNIKRFSI 421          
BLAST of mRNA_P-wetherbeei_contig13841.2.2 vs. uniprot
Match: A0A4D9D9T6_9STRA (Pex2_Pex12 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9T6_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.210e-18
Identity = 49/111 (44.14%), Postives = 67/111 (60.36%), Query Frame = 0
Query:    4 GDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLERALRMRMVDTAGGPLSGXXXXXXXXXXXXXXSRAINYHFLNRHLLWDSFTKMLLFLAPLIDWGAARRQEEG 114
            G W+   +RAL RAE+ +R  WLLN L+FLR G+YP+ L+R + MR+V    GP SG              +R IN+ F+NR LLW+ FT++ L + PL+DW   RRQ  G
Sbjct:  257 GQWKRRAYRALTRAESLFRLAWLLNFLVFLRVGSYPSLLQRLVGMRLVY---GPSSGGA------------ARNINFQFMNRQLLWEHFTQLALCVVPLVDWDGLRRQVSG 352          
BLAST of mRNA_P-wetherbeei_contig13841.2.2 vs. uniprot
Match: F0ZHQ8_DICPU (Peroxin-2 n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZHQ8_DICPU)

HSP 1 Score: 89.0 bits (219), Expect = 3.100e-17
Identity = 74/209 (35.41%), Postives = 110/209 (52.63%), Query Frame = 0
Query:    1 RPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLERALRMRMVDTAGGPLSGXXXXXXXXXXXXXXSRAINYHFLNRHLLWDSFTKMLLFLAPLIDWGAAR--------RQEEGESAAEGEXXXXXXXXXXXXXXXXXXSGRP---AACGACGRAPASMPYATDCGHVFCYFCLRAACARDPNYACAICGAHFAASRRWVV 198
            RP  D+R  +W  +   E++Y+AL +LN L FL  G Y T + R L MR+V                       SR I++ ++NR L+W  FT+ +LF+ PLI+    +        +   G + +   XXXXXXXXXXXXXXXXXX       + C  C   P S+PY +DCGH+FCY+C++ +C  D ++ C  C    +  +R+ +
Sbjct:  237 RPSTDFRKRLWNLMNFLESSYKALSILNFLAFLYDGKYVTLVNRVLHMRLV-----------------YAHPTLSRNISFEYMNRLLVWHGFTEFILFIMPLINIDRIKSFLYRVLIKNSFGSNTSXXXXXXXXXXXXXXXXXXXXXXXXXMVLSKCPICMNDPISIPYTSDCGHLFCYYCIKTSCMIDSSFTCPRCNTLISNIKRFSI 428          
BLAST of mRNA_P-wetherbeei_contig13841.2.2 vs. uniprot
Match: A0A059AJ29_EUCGR (Peroxin-2 n=4 Tax=Myrtoideae TaxID=1699513 RepID=A0A059AJ29_EUCGR)

HSP 1 Score: 87.4 bits (215), Expect = 6.340e-17
Identity = 60/195 (30.77%), Postives = 95/195 (48.72%), Query Frame = 0
Query:   10 VWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLERALRMRMVDTAGGPLSGXXXXXXXXXXXXXXSRAINYHFLNRHLLWDSFTKMLLFLAPLIDWGAAR-------RQEEGESAAEGEXXXXXXXXXXXXXXXXXXSGRPAACGACGRAPASMPY-ATDCGHVFCYFCLRAACARDPNYACAICGAHFAASRRW 196
             W  ++R E  Y+A    NLL+FL TG Y T +ERAL+ R+V   G P                 +RA+++ ++NR L+W+ F++MLL L PL++    +       + ++ +SA                       G  +AC  C  +P S+P+ A  C H +CY+CLR  CA  P++ C+ CG    A +R+
Sbjct:  187 AWVLVQRVEGIYKAASFGNLLIFLYTGRYRTLIERALKARLV--YGNP---------------NMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSTVKNFLRPFSKDKDADSA-----------------------GDDSACPICQNSP-SIPFLALPCQHRYCYYCLRTRCAATPSFRCSRCGEAVVAMQRF 340          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13841.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKS8_9PHAE3.820e-4040.93RING-type domain-containing protein n=2 Tax=Ectoca... [more]
W7TYI4_9STRA5.830e-3940.20Peroxin-2 n=1 Tax=Nannochloropsis gaditana TaxID=7... [more]
A0A1D2A1X3_AUXPR5.460e-2236.32Pex2_Pex12 domain-containing protein n=2 Tax=Auxen... [more]
A0A835Z8Z6_9STRA1.390e-2140.22RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A0L0HLU8_SPIPD2.190e-2032.98Peroxin-2 n=2 Tax=Spizellomyces TaxID=4815 RepID=A... [more]
UPI00064503DB2.770e-1928.84hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
PEX2_DICDI9.120e-1938.65Peroxisome biogenesis factor 2 n=1 Tax=Dictyosteli... [more]
A0A4D9D9T6_9STRA1.210e-1844.14Pex2_Pex12 domain-containing protein n=1 Tax=Nanno... [more]
F0ZHQ8_DICPU3.100e-1735.41Peroxin-2 n=1 Tax=Dictyostelium purpureum TaxID=57... [more]
A0A059AJ29_EUCGR6.340e-1730.77Peroxin-2 n=4 Tax=Myrtoideae TaxID=1699513 RepID=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 107..198
e-value: 4.3E-8
score: 34.7
IPR006845Pex, N-terminalPFAMPF04757Pex2_Pex12coord: 5..102
e-value: 1.2E-12
score: 47.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..132
NoneNo IPR availablePANTHERPTHR23350PEROXISOME ASSEMBLY PROTEIN 10coord: 6..197
NoneNo IPR availablePANTHERPTHR23350:SF4PEROXISOME BIOGENESIS FACTOR 2coord: 6..197
NoneNo IPR availableCDDcd16526RING-HC_PEX2coord: 145..187
e-value: 1.11948E-13
score: 60.863
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 145..192
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 162..171
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 146..186
score: 9.376395

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13841contigP-wetherbeei_contig13841:1025..1750 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13841.2.2mRNA_P-wetherbeei_contig13841.2.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13841 1025..1750 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13841.2.2 ID=prot_P-wetherbeei_contig13841.2.2|Name=mRNA_P-wetherbeei_contig13841.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=201bp
RPDGDWRHAVWRALRRAEAAYRALWLLNLLLFLRTGAYPTPLERALRMRM
VDTAGGPLSGGGGGGGGGNSGGGGSRAINYHFLNRHLLWDSFTKMLLFLA
PLIDWGAARRQEEGESAAEGEEGEESEADDAGGKEDSTESGRPAACGACG
RAPASMPYATDCGHVFCYFCLRAACARDPNYACAICGAHFAASRRWVVPR
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR006845Pex_N
IPR017907Znf_RING_CS
IPR001841Znf_RING