prot_P-wetherbeei_contig13546.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13546.1.1
Unique Nameprot_P-wetherbeei_contig13546.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length172
Homology
BLAST of mRNA_P-wetherbeei_contig13546.1.1 vs. uniprot
Match: D7FZB4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB4_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 4.500e-25
Identity = 68/156 (43.59%), Postives = 90/156 (57.69%), Query Frame = 0
Query:   16 RKRPGDCTASGHV--------GALPQCTEPRRGFAIKKQPTPQRERKDSAKTASRDQTQMFVKFLDSEGTPMPELSEDEKAKNFEIGRRYQRETSTRNNAWEADMAMKIALRDEAIAALPVHLQEAALQPDDVGPPPNRRIATITPPIPGFSPENY 163
            R  PG C A   +        G +  C   RRG  +  +P   + +K+ +  A   +T   +K LD+   PMPELS +EK +NF+IGRRY  + +T +N   AD+  KI LRD+AIA LP  LQ AA QPD   PP NRR+AT TPPIPGF  ++Y
Sbjct:   21 RSFPGVCAAGDRLERSRTAGSGGVVGC---RRGMMMAAKPG--KIKKERSGKALDKKTMTLLKLLDARPEPMPELSAEEKQRNFDIGRRYNSKMATSHNERMADLTTKIKLRDDAIAHLPELLQHAARQPDRNPPPLNRRVATYTPPIPGFDKKDY 171          
BLAST of mRNA_P-wetherbeei_contig13546.1.1 vs. uniprot
Match: A0A8J2WJL0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WJL0_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.020e-14
Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = 0
Query:   65 TQMFVKFLDSEGTPMPELSEDEKAKNFEIGRRYQRETSTRNNAWEADMAMKIALRDEAIAALPVHLQEAALQPDDVGPPP-NRRIATITPPIPGFSPENYPE 165
            T  +   LD+     P+ SE+E  +NFEIG RY + +  ++  +EA + +K+ L+  A+A+LP  L++ A+  DDV  PP +RR   +TPPIPGF PE YP+
Sbjct:   54 TAFYRAILDAPRKTRPKFSEEEAKRNFEIGARYNKLSRIKHCEFEAGLQLKLDLQQYALASLPPDLRKQAMSLDDVPLPPLDRRFWALTPPIPGFKPEAYPD 155          
BLAST of mRNA_P-wetherbeei_contig13546.1.1 vs. uniprot
Match: A0A835YRI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRI8_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.160e-11
Identity = 41/84 (48.81%), Postives = 51/84 (60.71%), Query Frame = 0
Query:   80 PELSEDEKAKNFEIGRRYQRETSTRNNAWEADMAMKIALRDEAIAALPVHLQEAALQPDDVGPPPNRRIATITPPIPGFSPENY 163
            P  + +E+A +FEIGR Y R    R+NA + DMA K+ALRD+A+AALP  L+  A   DD   P  RRIA  T PIP F    Y
Sbjct:   81 PNYTPEERAYHFEIGRAYTRNLMLRHNAQQEDMAWKLALRDQALAALPPGLRAHASSIDDAPFPLERRIALWTAPIPNFDAAYY 164          
BLAST of mRNA_P-wetherbeei_contig13546.1.1 vs. uniprot
Match: A0A7S3P841_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P841_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 8.000e-9
Identity = 35/82 (42.68%), Postives = 53/82 (64.63%), Query Frame = 0
Query:   80 PELSEDEKAKNFEIGRRYQRETSTRNNAWEADMAMKIALRDEAIAALPVH--LQEAALQPDDVGPPPNRRIATITPPIPGFS 159
            PE+S++EKA+ +E+GR Y   +   +N    D++ KI L+  A+  LP +  L+E A++ DD GPPP R IA  T PIPG++
Sbjct:   90 PEISQEEKARRYEVGRNYVIGSFKEHNEIHHDLSCKIHLKKHAVKMLPRNSKLKEEAMKVDDEGPPPWRHIAKWTAPIPGYN 171          
BLAST of mRNA_P-wetherbeei_contig13546.1.1 vs. uniprot
Match: A0A8J5I2G0_ZINOF (Uncharacterized protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5I2G0_ZINOF)

HSP 1 Score: 55.1 bits (131), Expect = 6.230e-6
Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 0
Query:   71 FLDSEGTPMPELSEDEKAKNFEIGRRYQRETSTRNNAWEADMAMKIALRDEAIAALPVHLQEAALQPDDVGPPPNRRIATITPPIPGF 158
             +D E  P  EL+ ++  +   + + Y R    ++ A +A     + L+ EAIAALP HLQ+AAL PD    P NR +AT+TPPI G+
Sbjct:  151 LVDKEAIPKYELTVEDGRR---LAKEYSRHLMRKHRARQAAETAFLKLKKEAIAALPDHLQKAALVPDLTPFPANRFMATLTPPIEGY 235          
BLAST of mRNA_P-wetherbeei_contig13546.1.1 vs. uniprot
Match: UPI00053FEB39 (uncharacterized protein LOC104886738 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FEB39)

HSP 1 Score: 52.8 bits (125), Expect = 4.020e-5
Identity = 33/88 (37.50%), Postives = 50/88 (56.82%), Query Frame = 0
Query:   71 FLDSEGTPMPELSEDEKAKNFEIGRRYQRETSTRNNAWEADMAMKIALRDEAIAALPVHLQEAALQPDDVGPPPNRRIATITPPIPGF 158
             +D++  P  EL+ ++  +   + + Y R    R+ A +      + L+ EAI ALP HL+ AAL PD    PPNR +AT+TPPI G+
Sbjct:  148 LVDADAIPKYELTVEDGRR---LAKEYSRVLMRRHRARQKAETTLLRLKKEAIEALPEHLKAAALVPDMTPFPPNRFMATLTPPIEGY 232          
BLAST of mRNA_P-wetherbeei_contig13546.1.1 vs. uniprot
Match: A0A7S2RGK1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGK1_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 4.630e-5
Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = 0
Query:   68 FVKFLDSEGTPMPELSEDEKAKNFEIGRRYQRETSTRNN--AWEADMAMKIALRDEAIAALPVHLQEAALQPDDVGPPPNRRIATITPPIPGFSPENY 163
             +K  D+     PE +E +  ++FEIGRRY  ETS  +N  AWE  + +KI L+  A+AALP   Q  A +  D  P  + R  T TPP+ GF    +
Sbjct:   64 LMKICDAPKRRRPEFTEAQYKRHFEIGRRYNIETSRLHNREAWE--LQLKIDLKGAAMAALPAEQQAFASEVLDFFPL-DFRHPTTTPPVQGFDASRF 158          
BLAST of mRNA_P-wetherbeei_contig13546.1.1 vs. uniprot
Match: A9NRU0_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NRU0_PICSI)

HSP 1 Score: 52.4 bits (124), Expect = 5.720e-5
Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 0
Query:   93 IGRRYQRETSTRNNAWEADMAMKIALRDEAIAALPVHLQEAALQPDDVGPPPNRRIATITPPIPGFS 159
            + + Y R  +  + A +A+ +M++ L+++AIAALP  L+EAAL PD    P NR  A +TPPI G+S
Sbjct:  175 LAKEYSRVLARDSRARQAEESMRLKLKNDAIAALPPRLREAALVPDLTPFPANRHRAYLTPPIEGYS 241          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13546.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FZB4_ECTSI4.500e-2543.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8J2WJL0_9STRA3.020e-1441.18Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835YRI8_9STRA3.160e-1148.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3P841_9STRA8.000e-942.68Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A8J5I2G0_ZINOF6.230e-639.77Uncharacterized protein n=2 Tax=Zingiber officinal... [more]
UPI00053FEB394.020e-537.50uncharacterized protein LOC104886738 n=1 Tax=Beta ... [more]
A0A7S2RGK1_9STRA4.630e-538.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A9NRU0_PICSI5.720e-543.28Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..156
NoneNo IPR availablePANTHERPTHR13359:SF239S RIBOSOMAL PROTEIN L40, MITOCHONDRIALcoord: 54..160
IPR03914539S ribosomal protein L40, mitochondrialPANTHERPTHR1335939S RIBOSOMAL PROTEIN L40, MITOCHONDRIALcoord: 54..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13546contigP-wetherbeei_contig13546:493..1340 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13546.1.1mRNA_P-wetherbeei_contig13546.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13546 78..1395 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13546.1.1 ID=prot_P-wetherbeei_contig13546.1.1|Name=mRNA_P-wetherbeei_contig13546.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=172bp
MMLCARAVRSGRGLLRKRPGDCTASGHVGALPQCTEPRRGFAIKKQPTPQ
RERKDSAKTASRDQTQMFVKFLDSEGTPMPELSEDEKAKNFEIGRRYQRE
TSTRNNAWEADMAMKIALRDEAIAALPVHLQEAALQPDDVGPPPNRRIAT
ITPPIPGFSPENYPELCVGDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039145MRPL40