prot_P-wetherbeei_contig13353.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig13353.1.1
Unique Name	prot_P-wetherbeei_contig13353.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	91

Homology

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BLAST of mRNA_P-wetherbeei_contig13353.1.1 vs. uniprot
Match: A0A7Z9PWR5_9BACT (HU family DNA-binding protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PWR5_9BACT)

HSP 1 Score: 135 bits (340), Expect = 1.050e-39
Identity = 67/89 (75.28%), Postives = 80/89 (89.89%), Query Frame = 0

Query:    1 MGKADLINAIADKSNRSKKDAAETLNIVLETIQENLKKGKGIRLIPFGSFEIRERKGRTGRNPRTGDKITIKARKVPAFRPGKALRDSV 89
            +GKA+LI  IA+K N SKK+A +TLN+VLETIQE+L KG G+RLIPFGSFE+RERKGRTGRNPRTG++I I ARKVPAF+PGKALRD+V
Sbjct:    2 VGKAELIADIAEKHNCSKKEATDTLNVVLETIQEHLTKGNGVRLIPFGSFEVRERKGRTGRNPRTGEEIKIAARKVPAFKPGKALRDAV 90

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BLAST of mRNA_P-wetherbeei_contig13353.1.1 vs. uniprot
Match: A0A7X8XKN3_9BURK (HU family DNA-binding protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XKN3_9BURK)

HSP 1 Score: 127 bits (320), Expect = 1.540e-36
Identity = 67/90 (74.44%), Postives = 76/90 (84.44%), Query Frame = 0

Query:    1 MGKADLINAIADKSNRSKKDAAETLNIVLETIQENLKKGKGIRLIPFGSFEIRERKGRTGRNPRTGDKITIKARKVPAFRPGKALRDSVK 90
            +GKADLI  IA+K   SKKDA   LN VLE+IQ++LKKG+G+RLIPFGSFEIRERK R GRNP TG +I IKARKVPAFRPGKALR+SVK
Sbjct:   11 VGKADLIGDIANKMEVSKKDAGLMLNAVLESIQDHLKKGEGVRLIPFGSFEIRERKARLGRNPSTGKEIKIKARKVPAFRPGKALRESVK 100

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BLAST of mRNA_P-wetherbeei_contig13353.1.1 vs. uniprot
Match: A0A6N8HUD4_9BACI (DNA-binding protein HU-1 n=2 Tax=Lentibacillus TaxID=175304 RepID=A0A6N8HUD4_9BACI)

HSP 1 Score: 110 bits (274), Expect = 1.170e-29
Identity = 51/90 (56.67%), Postives = 75/90 (83.33%), Query Frame = 0

Query:    1 MGKADLINAIADKSNRSKKDAAETLNIVLETIQENLKKGKGIRLIPFGSFEIRERKGRTGRNPRTGDKITIKARKVPAFRPGKALRDSVK 90
            M K DL+NA+A++S+ SKKDAA+ ++ V +++ ++LKKG+ ++LI FG+FE+RER  R GRNP+TG++I I A KVPAF+PGKAL+D+VK
Sbjct:    1 MNKTDLVNAVAEQSDLSKKDAAKAVDAVFDSVMDSLKKGEKVQLIGFGNFEVRERSARKGRNPQTGEEIEIPASKVPAFKPGKALKDAVK 90

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BLAST of mRNA_P-wetherbeei_contig13353.1.1 vs. uniprot
Match: A0A024QC63_9BACI (Uncharacterized protein n=112 Tax=Bacilli TaxID=91061 RepID=A0A024QC63_9BACI)

HSP 1 Score: 109 bits (272), Expect = 2.360e-29
Identity = 51/90 (56.67%), Postives = 73/90 (81.11%), Query Frame = 0

Query:    1 MGKADLINAIADKSNRSKKDAAETLNIVLETIQENLKKGKGIRLIPFGSFEIRERKGRTGRNPRTGDKITIKARKVPAFRPGKALRDSVK 90
            M K DL+NA+A+KS  SKKDA + ++ V +++ ++L+KG+ ++LI FG+FE+RER  R GRNP+TG++I I A KVPAF+PGKAL+DSVK
Sbjct:    1 MNKTDLVNAVAEKSELSKKDATKAVDAVFDSVMDSLQKGEKVQLIGFGNFEVRERSARKGRNPQTGEEIEIPASKVPAFKPGKALKDSVK 90

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BLAST of mRNA_P-wetherbeei_contig13353.1.1 vs. uniprot
Match: A0A6N8FJ50_9BACI (DNA-binding protein n=1 Tax=Ornithinibacillus caprae TaxID=2678566 RepID=A0A6N8FJ50_9BACI)

HSP 1 Score: 108 bits (271), Expect = 3.350e-29
Identity = 52/90 (57.78%), Postives = 72/90 (80.00%), Query Frame = 0

Query:    1 MGKADLINAIADKSNRSKKDAAETLNIVLETIQENLKKGKGIRLIPFGSFEIRERKGRTGRNPRTGDKITIKARKVPAFRPGKALRDSVK 90
            M K +L+NA+A+KS  SKKDA + ++ V E+I E+LK G  ++LI FG+FE+RER  RTGRNP+TG++I I A KVPAF+PGKAL+++VK
Sbjct:    1 MNKTELVNAVAEKSELSKKDATKVVDAVFESISESLKNGDKVQLIGFGNFEVRERSARTGRNPQTGEEIQIAASKVPAFKPGKALKEAVK 90

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BLAST of mRNA_P-wetherbeei_contig13353.1.1 vs. uniprot
Match: A0A0U4FBV1_9BACI (DNA-binding protein n=5 Tax=Lentibacillus TaxID=175304 RepID=A0A0U4FBV1_9BACI)

HSP 1 Score: 108 bits (270), Expect = 4.760e-29
Identity = 51/90 (56.67%), Postives = 73/90 (81.11%), Query Frame = 0

Query:    1 MGKADLINAIADKSNRSKKDAAETLNIVLETIQENLKKGKGIRLIPFGSFEIRERKGRTGRNPRTGDKITIKARKVPAFRPGKALRDSVK 90
            M K DL+NA+++KS  SKKDA + ++ V E++ ++LKKG+ ++LI FG+FE+RER  R GRNP+TG++I I A KVPAF+PGKAL++SVK
Sbjct:    1 MNKTDLVNAVSEKSELSKKDATKAVDAVFESVMDSLKKGEKVQLIGFGNFEVRERSERKGRNPQTGEEIKIPASKVPAFKPGKALKESVK 90

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BLAST of mRNA_P-wetherbeei_contig13353.1.1 vs. uniprot
Match: UPI000F4AA77A (HU family DNA-binding protein n=1 Tax=Ornithinibacillus gellani TaxID=2293253 RepID=UPI000F4AA77A)

HSP 1 Score: 108 bits (270), Expect = 4.760e-29
Identity = 54/90 (60.00%), Postives = 70/90 (77.78%), Query Frame = 0

Query:    1 MGKADLINAIADKSNRSKKDAAETLNIVLETIQENLKKGKGIRLIPFGSFEIRERKGRTGRNPRTGDKITIKARKVPAFRPGKALRDSVK 90
            M K DLINA+ADKS  SKKDA + ++ V E I ++L KG+ ++LI FG+FE+RER  R GRNP+TG++I I A KVPAF+ GKAL+DSVK
Sbjct:    1 MNKTDLINAVADKSELSKKDAGKAVDAVFEAIMDSLSKGEKVQLIGFGNFEVRERAARKGRNPQTGEEIEIAASKVPAFKAGKALKDSVK 90

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BLAST of mRNA_P-wetherbeei_contig13353.1.1 vs. uniprot
Match: UPI00098837C2 (HU family DNA-binding protein n=1 Tax=Sediminibacillus massiliensis TaxID=1926277 RepID=UPI00098837C2)

HSP 1 Score: 108 bits (269), Expect = 6.760e-29
Identity = 51/90 (56.67%), Postives = 72/90 (80.00%), Query Frame = 0

Query:    1 MGKADLINAIADKSNRSKKDAAETLNIVLETIQENLKKGKGIRLIPFGSFEIRERKGRTGRNPRTGDKITIKARKVPAFRPGKALRDSVK 90
            M K DLINA+ +++  SKKD+ + ++ VLETI E+L  G+G++LI FG+FE+RER  R GRNP+TG+++ I A KVPAF+PGKAL+D+VK
Sbjct:    1 MNKTDLINAVTERAELSKKDSTKVVDSVLETITESLSNGEGVQLIGFGNFEVRERSARKGRNPQTGEEMEIPASKVPAFKPGKALKDAVK 90

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BLAST of mRNA_P-wetherbeei_contig13353.1.1 vs. uniprot
Match: W7AZP0_9LIST (DNA-binding protein n=17 Tax=Listeriaceae TaxID=186820 RepID=W7AZP0_9LIST)

HSP 1 Score: 107 bits (268), Expect = 9.870e-29
Identity = 52/88 (59.09%), Postives = 70/88 (79.55%), Query Frame = 0

Query:    3 KADLINAIADKSNRSKKDAAETLNIVLETIQENLKKGKGIRLIPFGSFEIRERKGRTGRNPRTGDKITIKARKVPAFRPGKALRDSVK 90
            K DL+N++A+K+  SKKDAA+ +  V ET+QE L KG+ ++LI FG+FE+RER  R GRNPRT ++I I A KVPAF+PGKAL+D+VK
Sbjct:    4 KTDLVNSVAEKAELSKKDAAKAVEAVFETVQEKLSKGEKVQLIGFGNFEVRERAARKGRNPRTKEEIDIPASKVPAFKPGKALKDAVK 91

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BLAST of mRNA_P-wetherbeei_contig13353.1.1 vs. uniprot
Match: I0JNB2_HALH3 (DNA-binding protein HU n=31 Tax=Bacillaceae TaxID=186817 RepID=I0JNB2_HALH3)

HSP 1 Score: 107 bits (267), Expect = 1.360e-28
Identity = 51/90 (56.67%), Postives = 73/90 (81.11%), Query Frame = 0

Query:    1 MGKADLINAIADKSNRSKKDAAETLNIVLETIQENLKKGKGIRLIPFGSFEIRERKGRTGRNPRTGDKITIKARKVPAFRPGKALRDSVK 90
            M K DLINA+++K++ SKKDA + ++ V E+I ++LK G+ ++LI FG+FE+RER  R GRNP+TG++I I A KVPAF+PGKAL+D+VK
Sbjct:    1 MNKTDLINAVSEKTDLSKKDATQAVDSVFESIMDSLKDGEKVQLIGFGNFEVRERAARKGRNPQTGEEIEISASKVPAFKPGKALKDAVK 90

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig13353.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig13353.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7Z9PWR5_9BACT	1.050e-39	75.28	HU family DNA-binding protein n=1 Tax=Phycisphaera...	[more]
A0A7X8XKN3_9BURK	1.540e-36	74.44	HU family DNA-binding protein n=1 Tax=Burkholderia...	[more]
A0A6N8HUD4_9BACI	1.170e-29	56.67	DNA-binding protein HU-1 n=2 Tax=Lentibacillus Tax...	[more]
A0A024QC63_9BACI	2.360e-29	56.67	Uncharacterized protein n=112 Tax=Bacilli TaxID=91...	[more]
A0A6N8FJ50_9BACI	3.350e-29	57.78	DNA-binding protein n=1 Tax=Ornithinibacillus capr...	[more]
A0A0U4FBV1_9BACI	4.760e-29	56.67	DNA-binding protein n=5 Tax=Lentibacillus TaxID=17...	[more]
UPI000F4AA77A	4.760e-29	60.00	HU family DNA-binding protein n=1 Tax=Ornithinibac...	[more]
UPI00098837C2	6.760e-29	56.67	HU family DNA-binding protein n=1 Tax=Sediminibaci...	[more]
W7AZP0_9LIST	9.870e-29	59.09	DNA-binding protein n=17 Tax=Listeriaceae TaxID=18...	[more]
I0JNB2_HALH3	1.360e-28	56.67	DNA-binding protein HU n=31 Tax=Bacillaceae TaxID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000119	Histone-like DNA-binding protein	PRINTS	PR01727	DNABINDINGHU	coord: 40..55 score: 40.08 coord: 58..71 score: 60.55 coord: 74..88 score: 53.39
IPR000119	Histone-like DNA-binding protein	SMART	SM00411	bhlneu	coord: 1..90 e-value: 2.7E-39 score: 146.5
IPR000119	Histone-like DNA-binding protein	PFAM	PF00216	Bac_DNA_binding	coord: 1..90 e-value: 9.4E-33 score: 112.3
IPR000119	Histone-like DNA-binding protein	PANTHER	PTHR33175	DNA-BINDING PROTEIN HU	coord: 1..89
IPR010992	Integration host factor (IHF)-like DNA-binding domain superfamily	GENE3D	4.10.520.10		coord: 1..90 e-value: 6.6E-33 score: 115.0
IPR010992	Integration host factor (IHF)-like DNA-binding domain superfamily	SUPERFAMILY	47729	IHF-like DNA-binding proteins	coord: 1..90
None	No IPR available	PANTHER	PTHR33175:SF3	DNA-BINDING PROTEIN HU-BETA	coord: 1..89
None	No IPR available	CDD	cd13831	HU	coord: 3..87 e-value: 7.00436E-39 score: 122.5

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig13353	contig	P-wetherbeei_contig13353:1047..1319 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig13353.1.1	mRNA_P-wetherbeei_contig13353.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig13353 1047..1319 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig13353.1.1 ID=prot_P-wetherbeei_contig13353.1.1|Name=mRNA_P-wetherbeei_contig13353.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=91bp
MGKADLINAIADKSNRSKKDAAETLNIVLETIQENLKKGKGIRLIPFGSF
EIRERKGRTGRNPRTGDKITIKARKVPAFRPGKALRDSVK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000119	Hist_DNA-bd
IPR010992	IHF-like_DNA-bd_dom_sf