prot_P-wetherbeei_contig13058.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13058.1.1
Unique Nameprot_P-wetherbeei_contig13058.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length252
Homology
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A7Z9U8Z4_9BACT (RNA polymerase sigma factor n=2 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9U8Z4_9BACT)

HSP 1 Score: 374 bits (960), Expect = 2.220e-129
Identity = 196/216 (90.74%), Postives = 205/216 (94.91%), Query Frame = 0
Query:   37 HLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMRLAL 252
            HLNLVRYLAGKFSNRGENLEDL+QVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELT+ LGRVP+ADE+AKKL V  EDVLEAQELGQSYNLLSID+EL+++DSRKTSSLLDYLG  D QLE VEDRLALHRAFS LP RERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLE+MR AL
Sbjct:    1 HLNLVRYLAGKFSNRGENLEDLIQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTASLGRVPTADELAKKLGVTAEDVLEAQELGQSYNLLSIDTELESEDSRKTSSLLDYLGRADMQLELVEDRLALHRAFSSLPPRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLETMRKAL 216          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A7X8XNA1_9BURK (RNA polymerase sigma factor n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XNA1_9BURK)

HSP 1 Score: 324 bits (830), Expect = 3.850e-109
Identity = 162/243 (66.67%), Postives = 207/243 (85.19%), Query Frame = 0
Query:   10 DRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMRLAL 252
            DR+R R+LL  YA  +D + K EL A HLNLVRYLAGKF+ RGE+LEDLVQVG LGL+KA++R+DPERG EFTTYATPTIVGEIKRHFRDKGWA+K+PRRLQE N SV +T+E++ S LGR P+  EIA++LEV  ++VL+AQELG++YN++S++SE+D ++  K++SLLDYLG +D  LE+VEDRLAL RAF+ LP RE+ LM+LR+FENRSQS++A++L+ISQMHVSRLQ RSLE M+ AL
Sbjct:    6 DRDRVRELLKDYARTRDPQTKAELAALHLNLVRYLAGKFAGRGESLEDLVQVGSLGLVKALDRYDPERGNEFTTYATPTIVGEIKRHFRDKGWAMKIPRRLQELNQSVNRTSEQMASELGRAPTVQEIAERLEVAADEVLQAQELGRAYNMVSLNSEIDGENEGKSASLLDYLGQEDLNLERVEDRLALRRAFASLPPREQHLMFLRYFENRSQSDIARILDISQMHVSRLQQRSLERMKQAL 248          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A2W5XQA6_9BACT (RNA polymerase sigma factor n=1 Tax=Candidatus Eremiobacter sp. RRmetagenome_bin22 TaxID=2599629 RepID=A0A2W5XQA6_9BACT)

HSP 1 Score: 291 bits (746), Expect = 2.470e-96
Identity = 145/244 (59.43%), Postives = 190/244 (77.87%), Query Frame = 0
Query:    6 EARWDRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 249
            E R+DRER R L  A+   KD +V+DELV  HLNLVRYLA +F+NRGE L+DL+QVG +GLIKAI+RFD  RG EFTTYATPTI+GEIKR+FRDKGWA++VPRRLQE N +V +  E ++  LGR  +  ++A++L    E+++EAQELGQ+YNLLS+DSEL  D   K+++LLDYLG +D +L  +ED+  L R F  L  RER+++YLRF+EN SQ+EVA+ LN+SQMHVSRLQ R+LE ++
Sbjct:   13 EERFDRERTRGLFAAFGHEKDPRVRDELVVAHLNLVRYLAVRFANRGEALDDLIQVGTVGLIKAIDRFDTGRGVEFTTYATPTIIGEIKRYFRDKGWAVRVPRRLQELNLAVNRAVENVSVELGRAATVSDLAERLNATDEEIIEAQELGQAYNLLSLDSELSVDGDAKSTTLLDYLGREDSELNLLEDKANLARGFELLDRRERIILYLRFYENMSQTEVARRLNVSQMHVSRLQQRALEKLK 256          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A522QEK5_9BACT (RNA polymerase sigma factor n=2 Tax=bacterium TaxID=1869227 RepID=A0A522QEK5_9BACT)

HSP 1 Score: 287 bits (735), Expect = 1.670e-94
Identity = 152/264 (57.58%), Postives = 199/264 (75.38%), Query Frame = 0
Query:    1 TSSTGEARWDRERARQLLTAYAE--H-------KDS------KVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 249
            T  + E RWDRERAR   T ++E  H       KD+      +++ +LV  HLNLVRYLA KF+NRGE L+DL+QVG +GLIKAI+RFD ER  EFTTYATPTIVGEIKR+FRDKGWA+KVPRRLQE N +V +  E LTS+L R P   ++A+ L V+ E +LEAQELGQ+YN+LS+D+EL  ++ +K+++LLDYLG +D  LEQ EDR  L RAF  L  RERL++YLRF++N SQ+E+A+ LN+SQMH+SRLQ ++LE ++
Sbjct:    4 TVVSDEQRWDRERARAAFTRFSELRHRVTLPSCKDAERAEYERLRSDLVVMHLNLVRYLAVKFANRGEALDDLIQVGTVGLIKAIDRFDLERKVEFTTYATPTIVGEIKRYFRDKGWAVKVPRRLQELNLAVNRAVEMLTSKLNRSPMVSDLAEHLSVSEEQILEAQELGQAYNVLSLDTELGGENEKKSATLLDYLGAEDIGLEQTEDRANLERAFEALSRRERLILYLRFYQNISQTEIARRLNVSQMHISRLQQKALEKLK 267          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A522PKL9_9BACT (RNA polymerase sigma factor n=1 Tax=bacterium TaxID=1869227 RepID=A0A522PKL9_9BACT)

HSP 1 Score: 284 bits (726), Expect = 3.870e-93
Identity = 147/264 (55.68%), Postives = 197/264 (74.62%), Query Frame = 0
Query:    1 TSSTGEARWDRERARQLLTAYAEHKD---------------SKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 249
            T+ + E RWDRERAR   T ++E +                 +++ +LV  HLNLVRYLA KF+NRGE L+DL+QVG +GLIKAI+RFD +R  EFTTYATPTIVGEIKR+FRDKGWA+KVPRRLQE N +V +  E LTS+L R P   ++A+ L V+ E +LEAQELGQ+YN+LS+D+EL  ++ +K+++LLDYLG +D  L+Q EDR  L RAF  L  RERL++YLRF++N SQ+E+A+ LN+SQMH+SRLQ ++LE ++
Sbjct:    4 TAVSDEQRWDRERARAAFTRFSELRHRVALPSCKAVDRAEYERLRSDLVVMHLNLVRYLAVKFANRGEALDDLIQVGTVGLIKAIDRFDLDRKVEFTTYATPTIVGEIKRYFRDKGWAVKVPRRLQELNLAVNRAVEMLTSKLNRSPMVCDLAEHLGVSEEQILEAQELGQAYNVLSLDTELGGENEKKSATLLDYLGAEDIGLQQTEDRANLERAFEVLSRRERLILYLRFYQNISQTEIARRLNVSQMHISRLQQKALEKLK 267          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A2W5X4P5_9BACT (RNA polymerase sigma factor n=1 Tax=Candidatus Eremiobacteraeota bacterium TaxID=2052317 RepID=A0A2W5X4P5_9BACT)

HSP 1 Score: 269 bits (687), Expect = 9.680e-88
Identity = 136/223 (60.99%), Postives = 177/223 (79.37%), Query Frame = 0
Query:   30 KDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMRLAL 252
            +++LV  HLNLVRYLA KF+NRGE L+DL+QVG +GL+KAI+RFD ERG EFTTYATPTIVGEIKR+FRDKGWA+KVPRRLQE N SV +T E+L  +LGR  +  E+A  L    E++LEAQELGQ+YNLLS+D+EL+ +  +K+ +L DY+GT D  L  +ED+  L RAF  L  RER+++YLRF+E+ SQ+E+AK LN+SQMHVSRLQ ++LE ++  L
Sbjct:   13 RNDLVVAHLNLVRYLAIKFANRGETLDDLIQVGTVGLLKAIDRFDLERGVEFTTYATPTIVGEIKRYFRDKGWAVKVPRRLQELNLSVNRTVEKLAVKLGRSATVAELASHLGATEEEILEAQELGQAYNLLSLDTELNGEGDKKSQTLADYIGTTDAGLALLEDKANLERAFEVLTGRERVILYLRFYESVSQTEIAKRLNVSQMHVSRLQQKALEKLKAVL 235          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A7V1H170_9ACTN (SigB/SigF/SigG family RNA polymerase sigma factor n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V1H170_9ACTN)

HSP 1 Score: 254 bits (648), Expect = 1.650e-81
Identity = 132/241 (54.77%), Postives = 175/241 (72.61%), Query Frame = 0
Query:    9 WDRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 249
            WDR +  +L T Y E  D  ++DELV  +LNLV YLA +F NRGE LEDL+QVG +GLIKAI+RFD  R  EFTTYATPTIVGE+KR+FRDKGWAI+VPRRLQE N  + +    LT  L R P+ +EIAKK+ V PEDV+EA E  ++YN +S+D +L ++ S ++ SLL+Y+G DD +L  +EDR +L  A   L  +E+ ++YLRFF   +Q+E+A  L+ISQMHVSRL  R+L+ +R
Sbjct:   12 WDRAKTYELFTRYREDPDPAIRDELVKMYLNLVEYLARRFKNRGEPLEDLIQVGTIGLIKAIDRFDTGREVEFTTYATPTIVGELKRYFRDKGWAIRVPRRLQELNLQINQKISNLTQELRRTPTINEIAKKVGVTPEDVIEAMETSEAYNFISLDGDLSSE-SGESFSLLEYIGEDDKRLASLEDRASLAAALKDLSPQEQKILYLRFFRGLTQTEIAGELDISQMHVSRLLRRTLQILR 251          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A3C0CTM5_9BACT (RNA polymerase sigma factor n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A3C0CTM5_9BACT)

HSP 1 Score: 252 bits (644), Expect = 6.240e-81
Identity = 128/236 (54.24%), Postives = 175/236 (74.15%), Query Frame = 0
Query:   14 ARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 249
            A  L   +A  +DSK+++ LV  H NLVR+LAGKF NRGE +EDLVQVG +GLI AI+RFDPERGT+F+TYATPTIVGEI+RHFRDK W++KVPRRLQE N +  K  E+L+ +LGR P+  EIAK+++ + E+ LEA ELG +Y+ +S+D++L  +       L +++G  D  LE +E    L++A  CL  RER ++YLRFF++ SQ+EVA  LNISQMHVSRLQ ++L+ ++
Sbjct:   17 AEALFAEFARTRDSKIRNRLVEMHQNLVRFLAGKFVNRGEPIEDLVQVGTIGLINAIDRFDPERGTKFSTYATPTIVGEIRRHFRDKAWSLKVPRRLQELNLAANKAAEQLSQKLGRYPTIQEIAKQVDASEEETLEAIELGNAYDTVSLDTKLAYEGESAPLILSEFVGEQDCSLENLEKYGDLNQAMECLEQRERSIIYLRFFKDMSQTEVANKLNISQMHVSRLQQKALKRLK 252          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A7V4W9F2_9BACT (RNA polymerase sigma factor n=4 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V4W9F2_9BACT)

HSP 1 Score: 252 bits (644), Expect = 7.580e-81
Identity = 128/243 (52.67%), Postives = 174/243 (71.60%), Query Frame = 0
Query:    7 ARWDRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 249
            A W  E   +L   Y   +D K++D+LV  H NLVR+LAGKF+NRGE LEDLVQVG +GLI AI+RFDP+RGT+F+TYATPTIVGEI+RHFRDK W++KVPRRLQE N +  K  EEL+ +LG  P+  EIA  +  + E+ LEA ELG +Y+ +S+DS+L  +      +L +++G  D  L+ +E    L +A  CL  RE+ ++Y RFF++ SQ+EVAK LNISQMHVSRLQ ++L+ ++
Sbjct:   16 AEWTEEETEELFRKYIRTRDKKIRDQLVVMHQNLVRFLAGKFANRGEPLEDLVQVGIIGLINAIDRFDPDRGTKFSTYATPTIVGEIRRHFRDKAWSLKVPRRLQELNLAANKAAEELSKKLGHPPTIQEIAAAVGASEEETLEAIELGNAYDTVSLDSKLAHEGESAPLTLAEFVGDMDSSLQNIETYGDLKQAIDCLEPREKAIIYYRFFKDMSQTEVAKRLNISQMHVSRLQQKALKRLK 258          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A7C3DWE8_9BACT (SigB/SigF/SigG family RNA polymerase sigma factor n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C3DWE8_9BACT)

HSP 1 Score: 251 bits (641), Expect = 1.780e-80
Identity = 127/243 (52.26%), Postives = 173/243 (71.19%), Query Frame = 0
Query:    7 ARWDRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 249
            ARW  E   +L   YAE +D  ++++LV  H NLVRYLA KF+NRGE+LEDL+QVG +GL+ A++RFDP RGT+F+T+ATPTIVGEI+RHFRD  W++KVPRRLQE NA+  K +E+LT +LG  PS  EIAK++    E+ L A ELG +Y  +S+DS+L  ++     +L ++LG  D  LE +E    L +A   L  RER ++Y RFF +  Q+EVAK LNISQMHVSRLQ ++L+ ++
Sbjct:   10 ARWSDENVERLFREYAETRDPAIREKLVVIHQNLVRYLASKFANRGESLEDLIQVGLIGLVNAVDRFDPNRGTKFSTFATPTIVGEIRRHFRDNSWSLKVPRRLQELNAAANKASEKLTQKLGHPPSVQEIAKEIGATEEETLAAIELGNAYETVSLDSKLSNEEDDGKQTLTEFLGETDSGLEDIETLRDLTKAMEKLEPRERAIIYYRFFRDMPQTEVAKKLNISQMHVSRLQQKALKRLK 252          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Z9U8Z4_9BACT2.220e-12990.74RNA polymerase sigma factor n=2 Tax=Phycisphaerale... [more]
A0A7X8XNA1_9BURK3.850e-10966.67RNA polymerase sigma factor n=1 Tax=Burkholderiale... [more]
A0A2W5XQA6_9BACT2.470e-9659.43RNA polymerase sigma factor n=1 Tax=Candidatus Ere... [more]
A0A522QEK5_9BACT1.670e-9457.58RNA polymerase sigma factor n=2 Tax=bacterium TaxI... [more]
A0A522PKL9_9BACT3.870e-9355.68RNA polymerase sigma factor n=1 Tax=bacterium TaxI... [more]
A0A2W5X4P5_9BACT9.680e-8860.99RNA polymerase sigma factor n=1 Tax=Candidatus Ere... [more]
A0A7V1H170_9ACTN1.650e-8154.77SigB/SigF/SigG family RNA polymerase sigma factor ... [more]
A0A3C0CTM5_9BACT6.240e-8154.24RNA polymerase sigma factor n=1 Tax=Armatimonadete... [more]
A0A7V4W9F2_9BACT7.580e-8152.67RNA polymerase sigma factor n=4 Tax=Armatimonadete... [more]
A0A7C3DWE8_9BACT1.780e-8052.26SigB/SigF/SigG family RNA polymerase sigma factor ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000943RNA polymerase sigma-70PRINTSPR00046SIGMA70FCTcoord: 81..89
score: 60.29
coord: 222..237
score: 19.64
coord: 57..70
score: 56.13
coord: 237..248
score: 16.4
coord: 205..217
score: 38.21
IPR000943RNA polymerase sigma-70PIRSFPIRSF000770SigK_SigEcoord: 1..252
e-value: 1.1E-32
score: 111.2
IPR000943RNA polymerase sigma-70PROSITEPS00716SIGMA70_2coord: 222..248
IPR000943RNA polymerase sigma-70PROSITEPS00715SIGMA70_1coord: 57..70
IPR007627RNA polymerase sigma-70 region 2PFAMPF04542Sigma70_r2coord: 33..102
e-value: 1.2E-21
score: 76.3
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 103..155
e-value: 7.7E-17
score: 63.1
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 183..252
e-value: 1.6E-12
score: 48.8
IPR014322RNA polymerase sigma-B/F/G typeTIGRFAMTIGR02980TIGR02980coord: 27..250
e-value: 8.8E-87
score: 288.5
NoneNo IPR availableGENE3D1.20.120.1810coord: 3..101
e-value: 3.0E-29
score: 104.3
NoneNo IPR availablePANTHERPTHR30385:SF4RNA POLYMERASE SIGMA-F FACTORcoord: 8..249
NoneNo IPR availablePANTHERPTHR30385SIGMA FACTOR F FLAGELLARcoord: 8..249
NoneNo IPR availableCDDcd06171Sigma70_r4coord: 195..249
e-value: 3.07313E-12
score: 57.8846
IPR007630RNA polymerase sigma-70 region 4PFAMPF04545Sigma70_r4coord: 201..249
e-value: 3.7E-14
score: 52.0
IPR007624RNA polymerase sigma-70 region 3PFAMPF04539Sigma70_r3coord: 117..172
e-value: 4.8E-12
score: 45.8
IPR014284RNA polymerase sigma-70 like domainTIGRFAMTIGR02937TIGR02937coord: 31..251
e-value: 4.4E-36
score: 121.9
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 175..251
IPR013324RNA polymerase sigma factor, region 3/4-likeSUPERFAMILY88659Sigma3 and sigma4 domains of RNA polymerase sigma factorscoord: 106..182
IPR013325RNA polymerase sigma factor, region 2SUPERFAMILY88946Sigma2 domain of RNA polymerase sigma factorscoord: 15..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13058contigP-wetherbeei_contig13058:200..955 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13058.1.1mRNA_P-wetherbeei_contig13058.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13058 200..955 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13058.1.1 ID=prot_P-wetherbeei_contig13058.1.1|Name=mRNA_P-wetherbeei_contig13058.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp
TSSTGEARWDRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSN
RGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDK
GWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLE
AQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHR
AFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMRL
AL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000943RNA_pol_sigma70
IPR007627RNA_pol_sigma70_r2
IPR036388WH-like_DNA-bd_sf
IPR014322RNA_pol_sigma-B/F/G
IPR007630RNA_pol_sigma70_r4
IPR007624RNA_pol_sigma70_r3
IPR014284RNA_pol_sigma-70_dom
IPR013324RNA_pol_sigma_r3/r4-like
IPR013325RNA_pol_sigma_r2