mRNA_P-wetherbeei_contig13058.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A7Z9U8Z4_9BACT (RNA polymerase sigma factor n=2 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9U8Z4_9BACT) HSP 1 Score: 374 bits (960), Expect = 2.220e-129 Identity = 196/216 (90.74%), Postives = 205/216 (94.91%), Query Frame = 1 Query: 109 HLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMRLAL 756 HLNLVRYLAGKFSNRGENLEDL+QVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELT+ LGRVP+ADE+AKKL V EDVLEAQELGQSYNLLSID+EL+++DSRKTSSLLDYLG D QLE VEDRLALHRAFS LP RERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLE+MR AL Sbjct: 1 HLNLVRYLAGKFSNRGENLEDLIQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTASLGRVPTADELAKKLGVTAEDVLEAQELGQSYNLLSIDTELESEDSRKTSSLLDYLGRADMQLELVEDRLALHRAFSSLPPRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLETMRKAL 216
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A7X8XNA1_9BURK (RNA polymerase sigma factor n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XNA1_9BURK) HSP 1 Score: 324 bits (830), Expect = 3.850e-109 Identity = 162/243 (66.67%), Postives = 207/243 (85.19%), Query Frame = 1 Query: 28 DRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMRLAL 756 DR+R R+LL YA +D + K EL A HLNLVRYLAGKF+ RGE+LEDLVQVG LGL+KA++R+DPERG EFTTYATPTIVGEIKRHFRDKGWA+K+PRRLQE N SV +T+E++ S LGR P+ EIA++LEV ++VL+AQELG++YN++S++SE+D ++ K++SLLDYLG +D LE+VEDRLAL RAF+ LP RE+ LM+LR+FENRSQS++A++L+ISQMHVSRLQ RSLE M+ AL Sbjct: 6 DRDRVRELLKDYARTRDPQTKAELAALHLNLVRYLAGKFAGRGESLEDLVQVGSLGLVKALDRYDPERGNEFTTYATPTIVGEIKRHFRDKGWAMKIPRRLQELNQSVNRTSEQMASELGRAPTVQEIAERLEVAADEVLQAQELGRAYNMVSLNSEIDGENEGKSASLLDYLGQEDLNLERVEDRLALRRAFASLPPREQHLMFLRYFENRSQSDIARILDISQMHVSRLQQRSLERMKQAL 248
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A2W5XQA6_9BACT (RNA polymerase sigma factor n=1 Tax=Candidatus Eremiobacter sp. RRmetagenome_bin22 TaxID=2599629 RepID=A0A2W5XQA6_9BACT) HSP 1 Score: 291 bits (746), Expect = 2.470e-96 Identity = 145/244 (59.43%), Postives = 190/244 (77.87%), Query Frame = 1 Query: 16 EARWDRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 747 E R+DRER R L A+ KD +V+DELV HLNLVRYLA +F+NRGE L+DL+QVG +GLIKAI+RFD RG EFTTYATPTI+GEIKR+FRDKGWA++VPRRLQE N +V + E ++ LGR + ++A++L E+++EAQELGQ+YNLLS+DSEL D K+++LLDYLG +D +L +ED+ L R F L RER+++YLRF+EN SQ+EVA+ LN+SQMHVSRLQ R+LE ++ Sbjct: 13 EERFDRERTRGLFAAFGHEKDPRVRDELVVAHLNLVRYLAVRFANRGEALDDLIQVGTVGLIKAIDRFDTGRGVEFTTYATPTIIGEIKRYFRDKGWAVRVPRRLQELNLAVNRAVENVSVELGRAATVSDLAERLNATDEEIIEAQELGQAYNLLSLDSELSVDGDAKSTTLLDYLGREDSELNLLEDKANLARGFELLDRRERIILYLRFYENMSQTEVARRLNVSQMHVSRLQQRALEKLK 256
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A522QEK5_9BACT (RNA polymerase sigma factor n=2 Tax=bacterium TaxID=1869227 RepID=A0A522QEK5_9BACT) HSP 1 Score: 287 bits (735), Expect = 1.670e-94 Identity = 152/264 (57.58%), Postives = 199/264 (75.38%), Query Frame = 1 Query: 1 TSSTGEARWDRERARQLLTAYAE--H-------KDS------KVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 747 T + E RWDRERAR T ++E H KD+ +++ +LV HLNLVRYLA KF+NRGE L+DL+QVG +GLIKAI+RFD ER EFTTYATPTIVGEIKR+FRDKGWA+KVPRRLQE N +V + E LTS+L R P ++A+ L V+ E +LEAQELGQ+YN+LS+D+EL ++ +K+++LLDYLG +D LEQ EDR L RAF L RERL++YLRF++N SQ+E+A+ LN+SQMH+SRLQ ++LE ++ Sbjct: 4 TVVSDEQRWDRERARAAFTRFSELRHRVTLPSCKDAERAEYERLRSDLVVMHLNLVRYLAVKFANRGEALDDLIQVGTVGLIKAIDRFDLERKVEFTTYATPTIVGEIKRYFRDKGWAVKVPRRLQELNLAVNRAVEMLTSKLNRSPMVSDLAEHLSVSEEQILEAQELGQAYNVLSLDTELGGENEKKSATLLDYLGAEDIGLEQTEDRANLERAFEALSRRERLILYLRFYQNISQTEIARRLNVSQMHISRLQQKALEKLK 267
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A522PKL9_9BACT (RNA polymerase sigma factor n=1 Tax=bacterium TaxID=1869227 RepID=A0A522PKL9_9BACT) HSP 1 Score: 284 bits (726), Expect = 3.870e-93 Identity = 147/264 (55.68%), Postives = 197/264 (74.62%), Query Frame = 1 Query: 1 TSSTGEARWDRERARQLLTAYAEHKD---------------SKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 747 T+ + E RWDRERAR T ++E + +++ +LV HLNLVRYLA KF+NRGE L+DL+QVG +GLIKAI+RFD +R EFTTYATPTIVGEIKR+FRDKGWA+KVPRRLQE N +V + E LTS+L R P ++A+ L V+ E +LEAQELGQ+YN+LS+D+EL ++ +K+++LLDYLG +D L+Q EDR L RAF L RERL++YLRF++N SQ+E+A+ LN+SQMH+SRLQ ++LE ++ Sbjct: 4 TAVSDEQRWDRERARAAFTRFSELRHRVALPSCKAVDRAEYERLRSDLVVMHLNLVRYLAVKFANRGEALDDLIQVGTVGLIKAIDRFDLDRKVEFTTYATPTIVGEIKRYFRDKGWAVKVPRRLQELNLAVNRAVEMLTSKLNRSPMVCDLAEHLGVSEEQILEAQELGQAYNVLSLDTELGGENEKKSATLLDYLGAEDIGLQQTEDRANLERAFEVLSRRERLILYLRFYQNISQTEIARRLNVSQMHISRLQQKALEKLK 267
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A2W5X4P5_9BACT (RNA polymerase sigma factor n=1 Tax=Candidatus Eremiobacteraeota bacterium TaxID=2052317 RepID=A0A2W5X4P5_9BACT) HSP 1 Score: 269 bits (687), Expect = 9.680e-88 Identity = 136/223 (60.99%), Postives = 177/223 (79.37%), Query Frame = 1 Query: 88 KDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMRLAL 756 +++LV HLNLVRYLA KF+NRGE L+DL+QVG +GL+KAI+RFD ERG EFTTYATPTIVGEIKR+FRDKGWA+KVPRRLQE N SV +T E+L +LGR + E+A L E++LEAQELGQ+YNLLS+D+EL+ + +K+ +L DY+GT D L +ED+ L RAF L RER+++YLRF+E+ SQ+E+AK LN+SQMHVSRLQ ++LE ++ L Sbjct: 13 RNDLVVAHLNLVRYLAIKFANRGETLDDLIQVGTVGLLKAIDRFDLERGVEFTTYATPTIVGEIKRYFRDKGWAVKVPRRLQELNLSVNRTVEKLAVKLGRSATVAELASHLGATEEEILEAQELGQAYNLLSLDTELNGEGDKKSQTLADYIGTTDAGLALLEDKANLERAFEVLTGRERVILYLRFYESVSQTEIAKRLNVSQMHVSRLQQKALEKLKAVL 235
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A7V1H170_9ACTN (SigB/SigF/SigG family RNA polymerase sigma factor n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V1H170_9ACTN) HSP 1 Score: 254 bits (648), Expect = 1.650e-81 Identity = 132/241 (54.77%), Postives = 175/241 (72.61%), Query Frame = 1 Query: 25 WDRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 747 WDR + +L T Y E D ++DELV +LNLV YLA +F NRGE LEDL+QVG +GLIKAI+RFD R EFTTYATPTIVGE+KR+FRDKGWAI+VPRRLQE N + + LT L R P+ +EIAKK+ V PEDV+EA E ++YN +S+D +L ++ S ++ SLL+Y+G DD +L +EDR +L A L +E+ ++YLRFF +Q+E+A L+ISQMHVSRL R+L+ +R Sbjct: 12 WDRAKTYELFTRYREDPDPAIRDELVKMYLNLVEYLARRFKNRGEPLEDLIQVGTIGLIKAIDRFDTGREVEFTTYATPTIVGELKRYFRDKGWAIRVPRRLQELNLQINQKISNLTQELRRTPTINEIAKKVGVTPEDVIEAMETSEAYNFISLDGDLSSE-SGESFSLLEYIGEDDKRLASLEDRASLAAALKDLSPQEQKILYLRFFRGLTQTEIAGELDISQMHVSRLLRRTLQILR 251
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A3C0CTM5_9BACT (RNA polymerase sigma factor n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A3C0CTM5_9BACT) HSP 1 Score: 252 bits (644), Expect = 6.240e-81 Identity = 128/236 (54.24%), Postives = 175/236 (74.15%), Query Frame = 1 Query: 40 ARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 747 A L +A +DSK+++ LV H NLVR+LAGKF NRGE +EDLVQVG +GLI AI+RFDPERGT+F+TYATPTIVGEI+RHFRDK W++KVPRRLQE N + K E+L+ +LGR P+ EIAK+++ + E+ LEA ELG +Y+ +S+D++L + L +++G D LE +E L++A CL RER ++YLRFF++ SQ+EVA LNISQMHVSRLQ ++L+ ++ Sbjct: 17 AEALFAEFARTRDSKIRNRLVEMHQNLVRFLAGKFVNRGEPIEDLVQVGTIGLINAIDRFDPERGTKFSTYATPTIVGEIRRHFRDKAWSLKVPRRLQELNLAANKAAEQLSQKLGRYPTIQEIAKQVDASEEETLEAIELGNAYDTVSLDTKLAYEGESAPLILSEFVGEQDCSLENLEKYGDLNQAMECLEQRERSIIYLRFFKDMSQTEVANKLNISQMHVSRLQQKALKRLK 252
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A7V4W9F2_9BACT (RNA polymerase sigma factor n=4 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V4W9F2_9BACT) HSP 1 Score: 252 bits (644), Expect = 7.580e-81 Identity = 128/243 (52.67%), Postives = 174/243 (71.60%), Query Frame = 1 Query: 19 ARWDRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 747 A W E +L Y +D K++D+LV H NLVR+LAGKF+NRGE LEDLVQVG +GLI AI+RFDP+RGT+F+TYATPTIVGEI+RHFRDK W++KVPRRLQE N + K EEL+ +LG P+ EIA + + E+ LEA ELG +Y+ +S+DS+L + +L +++G D L+ +E L +A CL RE+ ++Y RFF++ SQ+EVAK LNISQMHVSRLQ ++L+ ++ Sbjct: 16 AEWTEEETEELFRKYIRTRDKKIRDQLVVMHQNLVRFLAGKFANRGEPLEDLVQVGIIGLINAIDRFDPDRGTKFSTYATPTIVGEIRRHFRDKAWSLKVPRRLQELNLAANKAAEELSKKLGHPPTIQEIAAAVGASEEETLEAIELGNAYDTVSLDSKLAHEGESAPLTLAEFVGDMDSSLQNIETYGDLKQAIDCLEPREKAIIYYRFFKDMSQTEVAKRLNISQMHVSRLQQKALKRLK 258
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A7C3DWE8_9BACT (SigB/SigF/SigG family RNA polymerase sigma factor n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C3DWE8_9BACT) HSP 1 Score: 251 bits (641), Expect = 1.780e-80 Identity = 127/243 (52.26%), Postives = 173/243 (71.19%), Query Frame = 1 Query: 19 ARWDRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 747 ARW E +L YAE +D ++++LV H NLVRYLA KF+NRGE+LEDL+QVG +GL+ A++RFDP RGT+F+T+ATPTIVGEI+RHFRD W++KVPRRLQE NA+ K +E+LT +LG PS EIAK++ E+ L A ELG +Y +S+DS+L ++ +L ++LG D LE +E L +A L RER ++Y RFF + Q+EVAK LNISQMHVSRLQ ++L+ ++ Sbjct: 10 ARWSDENVERLFREYAETRDPAIREKLVVIHQNLVRYLASKFANRGESLEDLIQVGLIGLVNAVDRFDPNRGTKFSTFATPTIVGEIRRHFRDNSWSLKVPRRLQELNAAANKASEKLTQKLGHPPSVQEIAKEIGATEEETLAAIELGNAYETVSLDSKLSNEEDDGKQTLTEFLGETDSGLEDIETLRDLTKAMEKLEPRERAIIYYRFFRDMPQTEVAKKLNISQMHVSRLQQKALKRLK 252 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig13058.1.1 >prot_P-wetherbeei_contig13058.1.1 ID=prot_P-wetherbeei_contig13058.1.1|Name=mRNA_P-wetherbeei_contig13058.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp TSSTGEARWDRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNback to top mRNA from alignment at P-wetherbeei_contig13058:200..955- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig13058.1.1 ID=mRNA_P-wetherbeei_contig13058.1.1|Name=mRNA_P-wetherbeei_contig13058.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig13058:200..955- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig13058:200..955- >mRNA_P-wetherbeei_contig13058.1.1 ID=mRNA_P-wetherbeei_contig13058.1.1|Name=mRNA_P-wetherbeei_contig13058.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig13058:200..955- (Phaeothamnion wetherbeei SAG_119_79)back to top |