mRNA_P-wetherbeei_contig13058.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig13058.1.1
Unique NamemRNA_P-wetherbeei_contig13058.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A7Z9U8Z4_9BACT (RNA polymerase sigma factor n=2 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9U8Z4_9BACT)

HSP 1 Score: 374 bits (960), Expect = 2.220e-129
Identity = 196/216 (90.74%), Postives = 205/216 (94.91%), Query Frame = 1
Query:  109 HLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMRLAL 756
            HLNLVRYLAGKFSNRGENLEDL+QVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELT+ LGRVP+ADE+AKKL V  EDVLEAQELGQSYNLLSID+EL+++DSRKTSSLLDYLG  D QLE VEDRLALHRAFS LP RERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLE+MR AL
Sbjct:    1 HLNLVRYLAGKFSNRGENLEDLIQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTASLGRVPTADELAKKLGVTAEDVLEAQELGQSYNLLSIDTELESEDSRKTSSLLDYLGRADMQLELVEDRLALHRAFSSLPPRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLETMRKAL 216          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A7X8XNA1_9BURK (RNA polymerase sigma factor n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XNA1_9BURK)

HSP 1 Score: 324 bits (830), Expect = 3.850e-109
Identity = 162/243 (66.67%), Postives = 207/243 (85.19%), Query Frame = 1
Query:   28 DRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMRLAL 756
            DR+R R+LL  YA  +D + K EL A HLNLVRYLAGKF+ RGE+LEDLVQVG LGL+KA++R+DPERG EFTTYATPTIVGEIKRHFRDKGWA+K+PRRLQE N SV +T+E++ S LGR P+  EIA++LEV  ++VL+AQELG++YN++S++SE+D ++  K++SLLDYLG +D  LE+VEDRLAL RAF+ LP RE+ LM+LR+FENRSQS++A++L+ISQMHVSRLQ RSLE M+ AL
Sbjct:    6 DRDRVRELLKDYARTRDPQTKAELAALHLNLVRYLAGKFAGRGESLEDLVQVGSLGLVKALDRYDPERGNEFTTYATPTIVGEIKRHFRDKGWAMKIPRRLQELNQSVNRTSEQMASELGRAPTVQEIAERLEVAADEVLQAQELGRAYNMVSLNSEIDGENEGKSASLLDYLGQEDLNLERVEDRLALRRAFASLPPREQHLMFLRYFENRSQSDIARILDISQMHVSRLQQRSLERMKQAL 248          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A2W5XQA6_9BACT (RNA polymerase sigma factor n=1 Tax=Candidatus Eremiobacter sp. RRmetagenome_bin22 TaxID=2599629 RepID=A0A2W5XQA6_9BACT)

HSP 1 Score: 291 bits (746), Expect = 2.470e-96
Identity = 145/244 (59.43%), Postives = 190/244 (77.87%), Query Frame = 1
Query:   16 EARWDRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 747
            E R+DRER R L  A+   KD +V+DELV  HLNLVRYLA +F+NRGE L+DL+QVG +GLIKAI+RFD  RG EFTTYATPTI+GEIKR+FRDKGWA++VPRRLQE N +V +  E ++  LGR  +  ++A++L    E+++EAQELGQ+YNLLS+DSEL  D   K+++LLDYLG +D +L  +ED+  L R F  L  RER+++YLRF+EN SQ+EVA+ LN+SQMHVSRLQ R+LE ++
Sbjct:   13 EERFDRERTRGLFAAFGHEKDPRVRDELVVAHLNLVRYLAVRFANRGEALDDLIQVGTVGLIKAIDRFDTGRGVEFTTYATPTIIGEIKRYFRDKGWAVRVPRRLQELNLAVNRAVENVSVELGRAATVSDLAERLNATDEEIIEAQELGQAYNLLSLDSELSVDGDAKSTTLLDYLGREDSELNLLEDKANLARGFELLDRRERIILYLRFYENMSQTEVARRLNVSQMHVSRLQQRALEKLK 256          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A522QEK5_9BACT (RNA polymerase sigma factor n=2 Tax=bacterium TaxID=1869227 RepID=A0A522QEK5_9BACT)

HSP 1 Score: 287 bits (735), Expect = 1.670e-94
Identity = 152/264 (57.58%), Postives = 199/264 (75.38%), Query Frame = 1
Query:    1 TSSTGEARWDRERARQLLTAYAE--H-------KDS------KVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 747
            T  + E RWDRERAR   T ++E  H       KD+      +++ +LV  HLNLVRYLA KF+NRGE L+DL+QVG +GLIKAI+RFD ER  EFTTYATPTIVGEIKR+FRDKGWA+KVPRRLQE N +V +  E LTS+L R P   ++A+ L V+ E +LEAQELGQ+YN+LS+D+EL  ++ +K+++LLDYLG +D  LEQ EDR  L RAF  L  RERL++YLRF++N SQ+E+A+ LN+SQMH+SRLQ ++LE ++
Sbjct:    4 TVVSDEQRWDRERARAAFTRFSELRHRVTLPSCKDAERAEYERLRSDLVVMHLNLVRYLAVKFANRGEALDDLIQVGTVGLIKAIDRFDLERKVEFTTYATPTIVGEIKRYFRDKGWAVKVPRRLQELNLAVNRAVEMLTSKLNRSPMVSDLAEHLSVSEEQILEAQELGQAYNVLSLDTELGGENEKKSATLLDYLGAEDIGLEQTEDRANLERAFEALSRRERLILYLRFYQNISQTEIARRLNVSQMHISRLQQKALEKLK 267          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A522PKL9_9BACT (RNA polymerase sigma factor n=1 Tax=bacterium TaxID=1869227 RepID=A0A522PKL9_9BACT)

HSP 1 Score: 284 bits (726), Expect = 3.870e-93
Identity = 147/264 (55.68%), Postives = 197/264 (74.62%), Query Frame = 1
Query:    1 TSSTGEARWDRERARQLLTAYAEHKD---------------SKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 747
            T+ + E RWDRERAR   T ++E +                 +++ +LV  HLNLVRYLA KF+NRGE L+DL+QVG +GLIKAI+RFD +R  EFTTYATPTIVGEIKR+FRDKGWA+KVPRRLQE N +V +  E LTS+L R P   ++A+ L V+ E +LEAQELGQ+YN+LS+D+EL  ++ +K+++LLDYLG +D  L+Q EDR  L RAF  L  RERL++YLRF++N SQ+E+A+ LN+SQMH+SRLQ ++LE ++
Sbjct:    4 TAVSDEQRWDRERARAAFTRFSELRHRVALPSCKAVDRAEYERLRSDLVVMHLNLVRYLAVKFANRGEALDDLIQVGTVGLIKAIDRFDLDRKVEFTTYATPTIVGEIKRYFRDKGWAVKVPRRLQELNLAVNRAVEMLTSKLNRSPMVCDLAEHLGVSEEQILEAQELGQAYNVLSLDTELGGENEKKSATLLDYLGAEDIGLQQTEDRANLERAFEVLSRRERLILYLRFYQNISQTEIARRLNVSQMHISRLQQKALEKLK 267          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A2W5X4P5_9BACT (RNA polymerase sigma factor n=1 Tax=Candidatus Eremiobacteraeota bacterium TaxID=2052317 RepID=A0A2W5X4P5_9BACT)

HSP 1 Score: 269 bits (687), Expect = 9.680e-88
Identity = 136/223 (60.99%), Postives = 177/223 (79.37%), Query Frame = 1
Query:   88 KDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMRLAL 756
            +++LV  HLNLVRYLA KF+NRGE L+DL+QVG +GL+KAI+RFD ERG EFTTYATPTIVGEIKR+FRDKGWA+KVPRRLQE N SV +T E+L  +LGR  +  E+A  L    E++LEAQELGQ+YNLLS+D+EL+ +  +K+ +L DY+GT D  L  +ED+  L RAF  L  RER+++YLRF+E+ SQ+E+AK LN+SQMHVSRLQ ++LE ++  L
Sbjct:   13 RNDLVVAHLNLVRYLAIKFANRGETLDDLIQVGTVGLLKAIDRFDLERGVEFTTYATPTIVGEIKRYFRDKGWAVKVPRRLQELNLSVNRTVEKLAVKLGRSATVAELASHLGATEEEILEAQELGQAYNLLSLDTELNGEGDKKSQTLADYIGTTDAGLALLEDKANLERAFEVLTGRERVILYLRFYESVSQTEIAKRLNVSQMHVSRLQQKALEKLKAVL 235          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A7V1H170_9ACTN (SigB/SigF/SigG family RNA polymerase sigma factor n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V1H170_9ACTN)

HSP 1 Score: 254 bits (648), Expect = 1.650e-81
Identity = 132/241 (54.77%), Postives = 175/241 (72.61%), Query Frame = 1
Query:   25 WDRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 747
            WDR +  +L T Y E  D  ++DELV  +LNLV YLA +F NRGE LEDL+QVG +GLIKAI+RFD  R  EFTTYATPTIVGE+KR+FRDKGWAI+VPRRLQE N  + +    LT  L R P+ +EIAKK+ V PEDV+EA E  ++YN +S+D +L ++ S ++ SLL+Y+G DD +L  +EDR +L  A   L  +E+ ++YLRFF   +Q+E+A  L+ISQMHVSRL  R+L+ +R
Sbjct:   12 WDRAKTYELFTRYREDPDPAIRDELVKMYLNLVEYLARRFKNRGEPLEDLIQVGTIGLIKAIDRFDTGREVEFTTYATPTIVGELKRYFRDKGWAIRVPRRLQELNLQINQKISNLTQELRRTPTINEIAKKVGVTPEDVIEAMETSEAYNFISLDGDLSSE-SGESFSLLEYIGEDDKRLASLEDRASLAAALKDLSPQEQKILYLRFFRGLTQTEIAGELDISQMHVSRLLRRTLQILR 251          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A3C0CTM5_9BACT (RNA polymerase sigma factor n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A3C0CTM5_9BACT)

HSP 1 Score: 252 bits (644), Expect = 6.240e-81
Identity = 128/236 (54.24%), Postives = 175/236 (74.15%), Query Frame = 1
Query:   40 ARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 747
            A  L   +A  +DSK+++ LV  H NLVR+LAGKF NRGE +EDLVQVG +GLI AI+RFDPERGT+F+TYATPTIVGEI+RHFRDK W++KVPRRLQE N +  K  E+L+ +LGR P+  EIAK+++ + E+ LEA ELG +Y+ +S+D++L  +       L +++G  D  LE +E    L++A  CL  RER ++YLRFF++ SQ+EVA  LNISQMHVSRLQ ++L+ ++
Sbjct:   17 AEALFAEFARTRDSKIRNRLVEMHQNLVRFLAGKFVNRGEPIEDLVQVGTIGLINAIDRFDPERGTKFSTYATPTIVGEIRRHFRDKAWSLKVPRRLQELNLAANKAAEQLSQKLGRYPTIQEIAKQVDASEEETLEAIELGNAYDTVSLDTKLAYEGESAPLILSEFVGEQDCSLENLEKYGDLNQAMECLEQRERSIIYLRFFKDMSQTEVANKLNISQMHVSRLQQKALKRLK 252          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A7V4W9F2_9BACT (RNA polymerase sigma factor n=4 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V4W9F2_9BACT)

HSP 1 Score: 252 bits (644), Expect = 7.580e-81
Identity = 128/243 (52.67%), Postives = 174/243 (71.60%), Query Frame = 1
Query:   19 ARWDRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 747
            A W  E   +L   Y   +D K++D+LV  H NLVR+LAGKF+NRGE LEDLVQVG +GLI AI+RFDP+RGT+F+TYATPTIVGEI+RHFRDK W++KVPRRLQE N +  K  EEL+ +LG  P+  EIA  +  + E+ LEA ELG +Y+ +S+DS+L  +      +L +++G  D  L+ +E    L +A  CL  RE+ ++Y RFF++ SQ+EVAK LNISQMHVSRLQ ++L+ ++
Sbjct:   16 AEWTEEETEELFRKYIRTRDKKIRDQLVVMHQNLVRFLAGKFANRGEPLEDLVQVGIIGLINAIDRFDPDRGTKFSTYATPTIVGEIRRHFRDKAWSLKVPRRLQELNLAANKAAEELSKKLGHPPTIQEIAAAVGASEEETLEAIELGNAYDTVSLDSKLAHEGESAPLTLAEFVGDMDSSLQNIETYGDLKQAIDCLEPREKAIIYYRFFKDMSQTEVAKRLNISQMHVSRLQQKALKRLK 258          
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Match: A0A7C3DWE8_9BACT (SigB/SigF/SigG family RNA polymerase sigma factor n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7C3DWE8_9BACT)

HSP 1 Score: 251 bits (641), Expect = 1.780e-80
Identity = 127/243 (52.26%), Postives = 173/243 (71.19%), Query Frame = 1
Query:   19 ARWDRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSNRGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDKGWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLEAQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHRAFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMR 747
            ARW  E   +L   YAE +D  ++++LV  H NLVRYLA KF+NRGE+LEDL+QVG +GL+ A++RFDP RGT+F+T+ATPTIVGEI+RHFRD  W++KVPRRLQE NA+  K +E+LT +LG  PS  EIAK++    E+ L A ELG +Y  +S+DS+L  ++     +L ++LG  D  LE +E    L +A   L  RER ++Y RFF +  Q+EVAK LNISQMHVSRLQ ++L+ ++
Sbjct:   10 ARWSDENVERLFREYAETRDPAIREKLVVIHQNLVRYLASKFANRGESLEDLIQVGLIGLVNAVDRFDPNRGTKFSTFATPTIVGEIRRHFRDNSWSLKVPRRLQELNAAANKASEKLTQKLGHPPSVQEIAKEIGATEEETLAAIELGNAYETVSLDSKLSNEEDDGKQTLTEFLGETDSGLEDIETLRDLTKAMEKLEPRERAIIYYRFFRDMPQTEVAKKLNISQMHVSRLQQKALKRLK 252          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13058.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Z9U8Z4_9BACT2.220e-12990.74RNA polymerase sigma factor n=2 Tax=Phycisphaerale... [more]
A0A7X8XNA1_9BURK3.850e-10966.67RNA polymerase sigma factor n=1 Tax=Burkholderiale... [more]
A0A2W5XQA6_9BACT2.470e-9659.43RNA polymerase sigma factor n=1 Tax=Candidatus Ere... [more]
A0A522QEK5_9BACT1.670e-9457.58RNA polymerase sigma factor n=2 Tax=bacterium TaxI... [more]
A0A522PKL9_9BACT3.870e-9355.68RNA polymerase sigma factor n=1 Tax=bacterium TaxI... [more]
A0A2W5X4P5_9BACT9.680e-8860.99RNA polymerase sigma factor n=1 Tax=Candidatus Ere... [more]
A0A7V1H170_9ACTN1.650e-8154.77SigB/SigF/SigG family RNA polymerase sigma factor ... [more]
A0A3C0CTM5_9BACT6.240e-8154.24RNA polymerase sigma factor n=1 Tax=Armatimonadete... [more]
A0A7V4W9F2_9BACT7.580e-8152.67RNA polymerase sigma factor n=4 Tax=Armatimonadete... [more]
A0A7C3DWE8_9BACT1.780e-8052.26SigB/SigF/SigG family RNA polymerase sigma factor ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13058contigP-wetherbeei_contig13058:200..955 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1203602.HMPREF1527_00582
PFAMsSigma70_r2,Sigma70_r3,Sigma70_r4
Model size756
Max annot lvl84998|Coriobacteriia
KEGG koko:K03090
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.05e-78
EggNOG OGsCOG1191@1|root,COG1191@2|Bacteria,2GKSY@201174|Actinobacteria,4CUM2@84998|Coriobacteriia
DescriptionRNA polymerase sigma-70 factor, sigma-B F G subfamily
Cds size756
COG categoryK
BRITEko00000,ko03021
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185972.516362-CDS-P-wetherbeei_contig13058:199..9551683185972.516362-CDS-P-wetherbeei_contig13058:199..955Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig13058 200..955 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13058.1.1prot_P-wetherbeei_contig13058.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig13058 200..955 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig13058.1.1

>prot_P-wetherbeei_contig13058.1.1 ID=prot_P-wetherbeei_contig13058.1.1|Name=mRNA_P-wetherbeei_contig13058.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp
TSSTGEARWDRERARQLLTAYAEHKDSKVKDELVAQHLNLVRYLAGKFSN
RGENLEDLVQVGCLGLIKAIERFDPERGTEFTTYATPTIVGEIKRHFRDK
GWAIKVPRRLQEFNASVAKTTEELTSRLGRVPSADEIAKKLEVNPEDVLE
AQELGQSYNLLSIDSELDTDDSRKTSSLLDYLGTDDFQLEQVEDRLALHR
AFSCLPSRERLLMYLRFFENRSQSEVAKVLNISQMHVSRLQARSLESMRL
AL
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mRNA from alignment at P-wetherbeei_contig13058:200..955-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig13058.1.1 ID=mRNA_P-wetherbeei_contig13058.1.1|Name=mRNA_P-wetherbeei_contig13058.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig13058:200..955- (Phaeothamnion wetherbeei SAG_119_79)
ACGAGCAGTACGGGTGAGGCGCGATGGGATCGCGAACGAGCCCGACAGCT TCTCACAGCCTACGCCGAGCACAAGGACAGCAAGGTTAAGGATGAGCTCG TCGCTCAGCACCTTAACTTAGTTCGCTATTTGGCGGGCAAATTCAGCAAT CGCGGCGAGAATCTTGAAGATCTCGTGCAAGTCGGATGCTTGGGCCTGAT TAAGGCCATTGAGCGTTTTGATCCGGAGCGGGGCACTGAATTCACCACAT ATGCTACTCCCACCATTGTCGGTGAGATCAAACGCCATTTTCGCGACAAA GGTTGGGCAATCAAAGTTCCCCGCCGACTTCAGGAGTTTAACGCCTCTGT TGCTAAGACCACTGAAGAGCTTACCTCTCGCTTAGGGCGCGTCCCCAGCG CCGATGAGATCGCCAAAAAGCTCGAAGTCAACCCGGAAGACGTCCTGGAA GCCCAGGAGTTGGGTCAATCTTACAATCTGCTCTCCATCGACAGCGAGCT CGACACGGACGACAGTCGCAAGACCTCGAGCCTGCTTGACTACCTTGGCA CGGATGACTTTCAACTTGAGCAGGTCGAGGACCGGCTTGCGCTCCATCGC GCCTTCTCTTGCCTGCCCTCTCGCGAGCGTCTGCTTATGTATTTACGCTT CTTCGAGAACCGTTCTCAGAGCGAAGTCGCCAAGGTTCTCAACATATCTC AGATGCACGTATCCCGCCTGCAGGCTCGCTCCCTCGAGTCCATGCGCCTG GCTTTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig13058:200..955-

>mRNA_P-wetherbeei_contig13058.1.1 ID=mRNA_P-wetherbeei_contig13058.1.1|Name=mRNA_P-wetherbeei_contig13058.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=756bp|location=Sequence derived from alignment at P-wetherbeei_contig13058:200..955- (Phaeothamnion wetherbeei SAG_119_79)
ACGAGCAGTACGGGTGAGGCGCGATGGGATCGCGAACGAGCCCGACAGCT
TCTCACAGCCTACGCCGAGCACAAGGACAGCAAGGTTAAGGATGAGCTCG
TCGCTCAGCACCTTAACTTAGTTCGCTATTTGGCGGGCAAATTCAGCAAT
CGCGGCGAGAATCTTGAAGATCTCGTGCAAGTCGGATGCTTGGGCCTGAT
TAAGGCCATTGAGCGTTTTGATCCGGAGCGGGGCACTGAATTCACCACAT
ATGCTACTCCCACCATTGTCGGTGAGATCAAACGCCATTTTCGCGACAAA
GGTTGGGCAATCAAAGTTCCCCGCCGACTTCAGGAGTTTAACGCCTCTGT
TGCTAAGACCACTGAAGAGCTTACCTCTCGCTTAGGGCGCGTCCCCAGCG
CCGATGAGATCGCCAAAAAGCTCGAAGTCAACCCGGAAGACGTCCTGGAA
GCCCAGGAGTTGGGTCAATCTTACAATCTGCTCTCCATCGACAGCGAGCT
CGACACGGACGACAGTCGCAAGACCTCGAGCCTGCTTGACTACCTTGGCA
CGGATGACTTTCAACTTGAGCAGGTCGAGGACCGGCTTGCGCTCCATCGC
GCCTTCTCTTGCCTGCCCTCTCGCGAGCGTCTGCTTATGTATTTACGCTT
CTTCGAGAACCGTTCTCAGAGCGAAGTCGCCAAGGTTCTCAACATATCTC
AGATGCACGTATCCCGCCTGCAGGCTCGCTCCCTCGAGTCCATGCGCCTG
GCTTTG
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