prot_P-wetherbeei_contig13027.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13027.2.1
Unique Nameprot_P-wetherbeei_contig13027.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length333
Homology
BLAST of mRNA_P-wetherbeei_contig13027.2.1 vs. uniprot
Match: A0A835YT25_9STRA (Light harvesting complex protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT25_9STRA)

HSP 1 Score: 267 bits (682), Expect = 5.660e-86
Identity = 128/164 (78.05%), Postives = 141/164 (85.98%), Query Frame = 0
Query:   12 LELAVYARSVS--MKLGPGGAGLVGSDFELPEWDPLGFTNNQNPDTIAWYRAAELKHGRVSMLAALGQIFQSFYHLPDPVFSETDKPWAALLKVYEERPLAIGQILLAVFACEAIGQAQQAKPGQAGGDLGWDPLGLKSSDPETWEKTQLRELKNGRLAMLAVS 173
            L   V +RS    MKLGPGG GLVGSD EL  WDPLGFTNNQNPDTI WYRAAELKHGRV+MLAALG+IFQS+YHLPDPVFS++ +PW AL +VY ERPLA+ QILLA+FACEAIGQAQQAKPGQA GDL WDPL LK SDPETWEK QLRELKNGRLAM+A++
Sbjct:   25 LRTGVVSRSAGPVMKLGPGGEGLVGSDLELATWDPLGFTNNQNPDTINWYRAAELKHGRVAMLAALGEIFQSYYHLPDPVFSQSARPWDALQQVYAERPLAVAQILLAIFACEAIGQAQQAKPGQAPGDLNWDPLNLKPSDPETWEKVQLRELKNGRLAMMAIA 188          
BLAST of mRNA_P-wetherbeei_contig13027.2.1 vs. uniprot
Match: FCP_CHAMQ (Fucoxanthin-chlorophyll a-c binding protein, chloroplastic n=1 Tax=Chattonella marina var. antiqua TaxID=859642 RepID=FCP_CHAMQ)

HSP 1 Score: 234 bits (598), Expect = 2.660e-73
Identity = 113/161 (70.19%), Postives = 132/161 (81.99%), Query Frame = 0
Query:   13 ELAVYARSVSMKLGPGGAGLVGSDFELPEWDPLGFTNNQNPDTIAWYRAAELKHGRVSMLAALGQIFQSFYHLPDPVFSETDKPWAALLKVYEERPLAIGQILLAVFACEAIGQAQQAKPGQAGGDLGWDPLGLKSSDPETWEKTQLRELKNGRLAMLAVS 173
             +A  + ++SMKLG    GL+GSD ELPE+DPLGFTNN  P  + WYRAAELKHGRV+MLAALGQ+ QSFYHLPDPVFSE+ KPW AL+KV  ERPLA  QI LA+FACEAIGQA QAKPGQA GDLGWDPL L+ S+ E +E+ QLRELKNGRLAM+A++
Sbjct:   26 SVAKSSGALSMKLGSSAEGLIGSDLELPEFDPLGFTNNPAPGALEWYRAAELKHGRVAMLAALGQLVQSFYHLPDPVFSESAKPWQALVKVCNERPLAAVQIGLAIFACEAIGQANQAKPGQAAGDLGWDPLNLRGSNEEIFERAQLRELKNGRLAMIAIT 186          
BLAST of mRNA_P-wetherbeei_contig13027.2.1 vs. uniprot
Match: W7TCK1_9STRA (Chloroplast light harvesting protein isoform 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCK1_9STRA)

HSP 1 Score: 207 bits (528), Expect = 9.820e-63
Identity = 107/156 (68.59%), Postives = 120/156 (76.92%), Query Frame = 0
Query:   20 SVSMKLGPGGAGLVGSDFELPEWDPLGFTNNQNPDTIAWYRAAELKHGRVSMLAALGQIFQSFYHLPDP--VFSETDKPWAALLKVYEERPLAIGQILLAVFACEAIGQAQQAKPGQAGGDLGWDPLGLKSSDPETWEKTQLRELKNGRLAMLAVS 173
            +V+MKLG    GL GSD E PE+DPLGFTNN  P+T+ WYRAAELKHGRV+MLAALGQI Q FY LPD   VFS  D+P  AL KV  ERPLA  QI LA+FA EA+GQ  QAKPGQA GDLGWDPL LKS DPE + K Q RELKNGRLAM+A++
Sbjct:   32 AVTMKLGSSAQGLAGSDIEFPEFDPLGFTNNPKPETLDWYRAAELKHGRVAMLAALGQIVQHFYTLPDASGVFSAGDRPIEALNKVVAERPLAAIQIGLAIFAVEALGQFNQAKPGQAPGDLGWDPLNLKSDDPEIYAKVQNRELKNGRLAMIAIA 187          
BLAST of mRNA_P-wetherbeei_contig13027.2.1 vs. uniprot
Match: A0A0G4GYX1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GYX1_VITBC)

HSP 1 Score: 201 bits (511), Expect = 3.540e-60
Identity = 101/157 (64.33%), Postives = 118/157 (75.16%), Query Frame = 0
Query:   22 SMKLGPGGAGLVGSDFELPEWDPLGFTNNQNPDTIAWYRAAELKHGRVSMLAALGQIFQSFYHLPDP--VFSETDKPWAALLKVYEERPLAIGQILLAVFACEAIGQAQQAKPGQAGGDLGWDPLGLKSSDPETWEKTQLRELKNGRLAMLAVSLLL 176
            SMKLG    GL+GSD E PE+DPLGFTNN + +T+ WYRAAELKHGRV MLAALGQ+ QSF+HLPDP  VF  TD  + A  KV  ERP A  QILLA+FA E +G   QAKPGQA GDL +DP  ++S DPE WE TQLRELKNGRLAM+ ++ +L
Sbjct:   43 SMKLGTNAQGLIGSDLEWPEFDPLGFTNNISDETLEWYRAAELKHGRVCMLAALGQLVQSFWHLPDPSGVFDSTDSSFGAFNKVVSERPWAAIQILLAIFAVEVLGAKTQAKPGQAPGDLDFDPFKVRSDDPEIWEATQLRELKNGRLAMIGITAML 199          
BLAST of mRNA_P-wetherbeei_contig13027.2.1 vs. uniprot
Match: A0A0G4GRR2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GRR2_9ALVE)

HSP 1 Score: 182 bits (462), Expect = 5.880e-53
Identity = 93/153 (60.78%), Postives = 113/153 (73.86%), Query Frame = 0
Query:   20 SVSMKLGPGGAGLVGSDFELPEWDPLGFTNNQNPDTIAWYRAAELKHGRVSMLAALGQIFQSFYHLPDPVFSETDKPWAALLKVYEERPLAIGQILLAVFACEAIGQAQQAKPGQAGGDLGWDPLGLKSSDPETWEKTQLRELKNGRLAMLAV 172
            S+ MKLG    G+ G+DFELP++DP+GFT N   +T+ WYRAAELKHGRV MLAALG I     HLPD  F E      A+ K+ EERP A  QI+LA+FA EA+GQ  Q++PG+ GGDLG+DPLGLK SDPE  E TQLRE+KNGRLAM+A+
Sbjct:   37 SLDMKLGRNAVGMPGTDFELPDFDPIGFTQNAPLETLEWYRAAELKHGRVCMLAALGNIVAGITHLPDTCF-EGKGSLGAVYKIMEERPWAGLQIVLAIFAVEALGQKIQSEPGREGGDLGFDPLGLKPSDPELLEATQLREIKNGRLAMIAI 188          
BLAST of mRNA_P-wetherbeei_contig13027.2.1 vs. uniprot
Match: A0A7S4UG07_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UG07_9DINO)

HSP 1 Score: 180 bits (456), Expect = 6.820e-53
Identity = 88/116 (75.86%), Postives = 100/116 (86.21%), Query Frame = 0
Query:   58 WYRAAELKHGRVSMLAALGQIFQSFYHLPDPVFSETDKPWAALLKVYEERPLAIGQILLAVFACEAIGQAQQAKPGQAGGDLGWDPLGLKSSDPETWEKTQLRELKNGRLAMLAVS 173
            WYRAAELKHGRV+MLAALGQIFQSFY LPDPVF+E   PW A++KVYEERPLA+ QILLA FACEA G   QA+PGQA GDLG+DPL LKS+DPE +E+ QLRELKNGRLAM A++
Sbjct:    1 WYRAAELKHGRVAMLAALGQIFQSFYTLPDPVFAEKANPWQAMIKVYEERPLAMVQILLAAFACEAAGAFIQARPGQAPGDLGFDPLNLKSNDPEIFERVQLRELKNGRLAMWAIA 116          
BLAST of mRNA_P-wetherbeei_contig13027.2.1 vs. uniprot
Match: A0A6H5KKC3_9PHAE (LHCP protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKC3_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 1.750e-45
Identity = 85/145 (58.62%), Postives = 103/145 (71.03%), Query Frame = 0
Query:   31 GLVGSDFELP-EWDPLGFTNNQNPDTIAWYRAAELKHGRVSMLAALGQIFQSFYHLPDP--VFSETDKPWAALLKVYEERPLAIGQILLAVFACEAIGQAQQAKPGQAGGDLGWDPLGLKSSDPETWEKTQLRELKNGRLAMLAV 172
            GLVG+D E    +DPLGF  N  P  + WYRAAELKHGRV MLAA GQI Q F H  DP  +F ++   W A+ +VYE+RP A  QI+LA+FA E  G  +Q +  +AGGDLG+DPLGLK S+PE WE+ QLRELKNGRLAM A+
Sbjct:   64 GLVGADIETGGPFDPLGFGKNCPPQQMQWYRAAELKHGRVCMLAAFGQITQHFTHWNDPSGIFDKSGSAWGAMQQVYEQRPFAFLQIILAIFAVEVYGNKRQEE-NEAGGDLGFDPLGLKPSNPEAWERVQLRELKNGRLAMFAI 207          
BLAST of mRNA_P-wetherbeei_contig13027.2.1 vs. uniprot
Match: A0A0G4F0S3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F0S3_VITBC)

HSP 1 Score: 162 bits (409), Expect = 7.040e-45
Identity = 85/156 (54.49%), Postives = 111/156 (71.15%), Query Frame = 0
Query:   18 ARSVSMKLGPGGAG-LVGSDFELPEWDPLGFTNNQNPDTIAWYRAAELKHGRVSMLAALGQIFQSFYHLPDPVFSETDKPWAALLKVYEERPLAIGQILLAVFACEAIGQAQQAKPGQAGGDLGWDPLGLKSSDPETWEKTQLRELKNGRLAMLAV 172
            +R++ M L P  AG LVG+D + P +DPLG +   + +T+ WYRAAELKHGRV+MLAALG + Q+ Y LPD  F E + P  A+ K++ ERPLAI QIL A+ A E +G   Q +  + GGDL WDPLG+K +DPE + K QLRELKNGRLAM++V
Sbjct:   42 SRTMQMALDPSFAGGLVGNDIDAPNFDPLGLSKTADDETLKWYRAAELKHGRVAMLAALGFLVQNIYQLPDSPFQEAN-PINAVYKLWSERPLAIMQILTAIAAIEVLGNQVQLQT-EDGGDLKWDPLGIKPNDPEEFRKMQLRELKNGRLAMISV 195          
BLAST of mRNA_P-wetherbeei_contig13027.2.1 vs. uniprot
Match: W7TEK9_9STRA (Fucoxanthin chlorophyll a c binding protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEK9_9STRA)

HSP 1 Score: 156 bits (395), Expect = 9.850e-43
Identity = 83/144 (57.64%), Postives = 102/144 (70.83%), Query Frame = 0
Query:   30 AGLVGSDFELPEWDPLGFTNNQNPDTIAWYRAAELKHGRVSMLAALGQIFQSFYHLPDPVFSETDKPWAALLKVYEERPLAIGQILLAVFACEAIGQAQQAKPGQAGGDLGWDPLGLKSSDPETWEKTQLRELKNGRLAMLAVS 173
            +G+VGSD E+PE+DPLG   N++ +T+ WYRAAELKHGRV MLA++G + Q  YHLPD  F E  KP  ALLKV  ERPLA  QI +A+ A E +G + Q     A GDL +DPLGLK  DPE   + QL+ELKNGRLAMLA +
Sbjct:   54 SGIVGSDVEVPEFDPLGLAKNKDEETLGWYRAAELKHGRVCMLASVGYLVQGLYHLPDGPF-EASKPIDALLKVSSERPLAAVQIAIAIAALEVLGASIQKYT--APGDLTFDPLGLKPEDPEELAELQLKELKNGRLAMLATA 194          
BLAST of mRNA_P-wetherbeei_contig13027.2.1 vs. uniprot
Match: A0A0G4FYZ7_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FYZ7_9ALVE)

HSP 1 Score: 146 bits (368), Expect = 5.820e-38
Identity = 80/152 (52.63%), Postives = 103/152 (67.76%), Query Frame = 0
Query:   32 LVGSDFELPEWDPLGFTNNQNPDTIAWYRAAELKHGRVSMLAALGQIFQSFYHLPDPVF-SETDKPWAALLKVYEERPLAIGQILLAVFACEAIGQAQQAKPGQAGGDLGWDPLGLKSS-----DPETWEKTQLRELKNGRLAMLAVSLLLF 177
            +VGSD ELP +DP G + +  P+T AWYRAAELKH R+ MLAALG   Q    LPDPVF S+ D  W+AL  V  +RP A+ QILLA+ A E +  +   + G+A GD GWDPL L+ S     +PE +E  QLRELKNGRLAM++V+ +L+
Sbjct:  116 VVGSDVELPLFDPWGLSASIKPETFAWYRAAELKHARICMLAALGLFIQPLAQLPDPVFQSDPDSAWSALEAVSTQRPAAVAQILLAIAAIETL--SVNLQEGRAPGDYGWDPLKLQKSQGLEGNPEKFEAMQLRELKNGRLAMISVAGMLY 265          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13027.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YT25_9STRA5.660e-8678.05Light harvesting complex protein n=2 Tax=Tribonema... [more]
FCP_CHAMQ2.660e-7370.19Fucoxanthin-chlorophyll a-c binding protein, chlor... [more]
W7TCK1_9STRA9.820e-6368.59Chloroplast light harvesting protein isoform 4 n=2... [more]
A0A0G4GYX1_VITBC3.540e-6064.33Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A0G4GRR2_9ALVE5.880e-5360.78Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S4UG07_9DINO6.820e-5375.86Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A6H5KKC3_9PHAE1.750e-4558.62LHCP protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A0G4F0S3_VITBC7.040e-4554.49Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
W7TEK9_9STRA9.850e-4357.64Fucoxanthin chlorophyll a c binding protein n=3 Ta... [more]
A0A0G4FYZ7_9ALVE5.820e-3852.63Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 30..201
e-value: 1.0E-33
score: 118.9
NoneNo IPR availablePANTHERPTHR21649:SF89CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTICcoord: 37..173
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 32..182
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 36..176
e-value: 2.3E-31
score: 109.5
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 37..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13027contigP-wetherbeei_contig13027:314..1312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13027.2.1mRNA_P-wetherbeei_contig13027.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13027 2..1418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13027.2.1 ID=prot_P-wetherbeei_contig13027.2.1|Name=mRNA_P-wetherbeei_contig13027.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=333bp
MRAGGPMDVWMLELAVYARSVSMKLGPGGAGLVGSDFELPEWDPLGFTNN
QNPDTIAWYRAAELKHGRVSMLAALGQIFQSFYHLPDPVFSETDKPWAAL
LKVYEERPLAIGQILLAVFACEAIGQAQQAKPGQAGGDLGWDPLGLKSSD
PETWEKTQLRELKNGRLAMLAVSLLLFFAIAYSFQQCGMRLPLTSSLPSP
LLLSVLSASALRLLALWYAITPLFKTVPLRFASVVSTLLFLKCTDQRLSG
PGEPDRTGRHRGDPGGPRKFDCISLRPLVLVCIIHGDGAGSRHIPAEVSG
VLLGPMTSKLTIRSQIGRKPSHSTDLFSIIPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln