prot_P-wetherbeei_contig12802.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12802.1.1
Unique Nameprot_P-wetherbeei_contig12802.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length644
Homology
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A3D5DBQ9_9GAMM (Transcription-repair-coupling factor n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DBQ9_9GAMM)

HSP 1 Score: 830 bits (2143), Expect = 1.100e-288
Identity = 415/645 (64.34%), Postives = 513/645 (79.53%), Query Frame = 0
Query:    1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLS-GDEVGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQRRRRRATTDQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 644
            +Y D+  GLAPAGIEYYLPLFFD LD L DY+P+D+L+ VDE +EA   RF  AV +RYEQLR+D+ERP++ P R+F    ++L  LK Y    +S L  G+      F T    ++ ID  AA+P  L+   +K   GRVL LADS GRRE+MLELF     RP+ F SW +FL+    VG+AVA+L EG E+  P + L+TE QLFGERA QRRRRR   D++++I++L EL+ G+PVVHE HG+GRY  LEVLT+G   NEFIK+EYADGD LYVPV++L+ I+RYSGVDP HAP+HKLGSGQWE+A+++A + I DVAAELLE+HARR AR G+ FT+DR  + AF   FPFEETPDQ +AIE VL DM+  +PMDRLVCGDVGFGKTEVAMRAAF+A N+G QVA+LVPTTLLA+QHY++  DRFADWP+R+  LSRF  + ET+  LAG+  GTVDIV+GTHKLLG D+ FK LGLL+IDEEHRFGVRQKEKIKA+R+D+DILTLTATPIPR+LN+AL+GTRELSII+TAPS+RLAIKTF+REWS+ L++EA+LREI RGGQVYFVHNEVE+IE++A+ +A +AP AR++ AHGQMRE ELE VMLDFYH RCN+L+CTTIIE+ IDVPNAN +IINRA
Sbjct:  252 IYNDISGGLAPAGIEYYLPLFFDHLDTLFDYIPSDSLIFVDEELEAGATRFREAVNDRYEQLRYDMERPILPPDRMFLNLEDVLESLKMYPRTHLSSLDLGENEKNFRFNTRAGAKLTIDGHAASPLRLVLSFLKNYDGRVLFLADSNGRRETMLELFNSNNIRPKFFGSWEDFLNGTDTVGLAVASLSEGVELVNPAICLVTEFQLFGERALQRRRRRTRLDKDSIIKSLAELQLGSPVVHEDHGIGRYRGLEVLTIGSTENEFIKLEYADGDKLYVPVASLNLINRYSGVDPAHAPIHKLGSGQWERAKKRATKCIYDVAAELLEVHARREARAGYRFTLDRDAYTAFCQDFPFEETPDQQDAIEAVLVDMENIRPMDRLVCGDVGFGKTEVAMRAAFVAANEGRQVAVLVPTTLLAQQHYQTFLDRFADWPIRVKPLSRFRAANETRTVLAGLRAGTVDIVIGTHKLLGADVVFKDLGLLIIDEEHRFGVRQKEKIKAIRSDVDILTLTATPIPRSLNLALSGTRELSIISTAPSKRLAIKTFLREWSDGLVQEALLREISRGGQVYFVHNEVESIEKIAKDIARLAPAARVSFAHGQMREKELERVMLDFYHRRCNILVCTTIIESGIDVPNANTIIINRA 896          
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A1Z9UIZ4_9GAMM (Transcription-repair-coupling factor n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UIZ4_9GAMM)

HSP 1 Score: 827 bits (2137), Expect = 8.040e-288
Identity = 418/645 (64.81%), Postives = 511/645 (79.22%), Query Frame = 0
Query:    1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLSGDEVGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQ-RRRRRATTDQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 644
            +Y DV EGLAPAGIEYYLPLF ++ ++L+DY+P+D +VI DE++E   ++F ++V ERYE LRHD  RP++    +FA   EL + L+  ACV +SG S  +    +F T  PV VP+DAR+  PF  +  H+ R  GR+L LADSLGRRE++L+LF+ Q F P  F  W EFL +D   GIAVA+L  GAE+ EPRLS+LTE QLFG R  Q RRR+R+    E++IRNLTEL   +PVVHE +GVGRY+ LEVLTVG + NEFIKIEY DGD LY+PV +LD ISRYSG DP+HAPLHKLG+ QWEKARRKA EKIRDVAAELLEIHA+RA R+G +F +D   + +F  +FPFEET DQ NA++ VL DMQ  QPMDRL+CGDVGFGKTEVA+RAA +AVNDG QVAILVPTTLLA QH+E+ +DRFA  PVR+  LSRF + K+T+  +  +  GTVDIV+GTHKLL K+I+FKRLGLLV+DEEHRFGV QKEKIK+LRAD+DILTLTATPIPRTLN+AL+GTRELSIIAT P +RLA+KTFVREWS +L+REAILREI RGGQVY+VHN+VE+IE+  + +  I PEARIAVAHGQMRE +LE VMLDF HGR NVL+C+TIIET +D+PNAN M+INRA
Sbjct:  250 IYXDVSEGLAPAGIEYYLPLFHEETNVLADYIPSDCVVIFDESIEIAADKFRLSVDERYEALRHDTARPILATKDIFAEFEELQSSLQTLACVYLSGTSNSD-SPAKFNTVVPVNVPVDARSEDPFIAIKHHLSRMNGRLLFLADSLGRREALLDLFRDQIFSPVVFAGWREFLGADERYGIAVASLENGAELIEPRLSILTESQLFGRRTXQXRRRKRSRXSHESIIRNLTELNVNSPVVHEDYGVGRYLGLEVLTVGDIQNEFIKIEYRDGDKLYIPVGSLDLISRYSGSDPEHAPLHKLGTDQWEKARRKAGEKIRDVAAELLEIHAKRALRRGXSFVIDEDAYNSFVHSFPFEETVDQANAVDAVLKDMQNPQPMDRLICGDVGFGKTEVALRAACVAVNDGFQVAILVPTTLLATQHHETFRDRFAKLPVRVELLSRFRNIKQTREVVGALESGTVDIVIGTHKLLSKEIKFKRLGLLVVDEEHRFGVVQKEKIKSLRADVDILTLTATPIPRTLNLALSGTRELSIIATPPLKRLAVKTFVREWSKTLIREAILREISRGGQVYYVHNQVESIEKEVKKLERIVPEARIAVAHGQMREQQLEQVMLDFSHGRINVLVCSTIIETGLDIPNANTMLINRA 893          
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A1G0JBZ0_9GAMM (Transcription-repair-coupling factor n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11 TaxID=1798301 RepID=A0A1G0JBZ0_9GAMM)

HSP 1 Score: 779 bits (2011), Expect = 9.770e-269
Identity = 389/646 (60.22%), Postives = 498/646 (77.09%), Query Frame = 0
Query:    1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLS-GDEVGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQRR-RRRATTDQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 644
            VY+DV +GLAPAGIEYYLPLF+ + + L DY+  D +VI+DE +    E F   + +RYEQ RHD+ERPL+ P  L+ +  +L   +K +  + V+G++ G+    + ++T  PV++PIDAR   P  +L   I    GR L+ A+S GRRE++LE+F+Q    P  F  W+ FLS+   +G+  AAL +GA+I +P + +++E QLFG+R  QRR R+R   D EA+IRNLTEL  GAPVVHE +GVGRY  L  L +  +  EFI IEYA  D LYVPV++LD ISRY+GVDP+HAPLH+LGSGQWEKA++KA +++ DVAAELL++HARR AR G++FTVD   + AF  +FPFEETP Q +AI+ V+ DMQ  +PMDRL+CGD GFGKTEVAMRAAFIAV +G QVA+LVPTTLLA+QHY++ KDRFADWPV+I  LSRF   KE +  L G+ADGTVDIV+GTHKL+  +++F+RLGLL+IDEEHRFGVRQKEK KALR++ID+LTLTATPIPRTLNMAL+  RELSIIAT P+RRL++KTFVREWSNSLLREA+LREI RGGQVYF++N++E IE+ A+ +  + PEAR+ +AHGQM E ELE VMLDFYH R NVL+CTTIIET IDVP+AN +IINRA
Sbjct:  253 VYRDVSQGLAPAGIEYYLPLFYQETNTLFDYIADDAVVILDEDIRQTMEGFWKDIEDRYEQCRHDIERPLLPPGELYLSQQDLFTRIKPFTRIYVTGMAQGERAHAINYSTSIPVQLPIDARLPEPLGVLKRFIDGFEGRTLIAAESSGRRETLLEMFRQHALFPTQFPDWSAFLSATDKLGLVTAALEQGAQISDPEIVIISESQLFGDRVQQRRLRKRRQQDSEAIIRNLTELTAGAPVVHEDNGVGRYQGLVTLNINDIPAEFICIEYAQSDKLYVPVASLDLISRYAGVDPEHAPLHRLGSGQWEKAKQKAAQRVYDVAAELLDMHARRLARSGNSFTVDENEYFAFIQSFPFEETPGQADAIKAVIEDMQQPKPMDRLICGDAGFGKTEVAMRAAFIAVQNGRQVALLVPTTLLAQQHYQNFKDRFADWPVKIESLSRFRTGKEQEKVLQGLADGTVDIVIGTHKLIQNNVKFQRLGLLIIDEEHRFGVRQKEKFKALRSEIDVLTLTATPIPRTLNMALSSLRELSIIATPPARRLSVKTFVREWSNSLLREALLREINRGGQVYFLYNQIETIEKTAREIETLMPEARVRIAHGQMPEKELEQVMLDFYHRRFNVLVCTTIIETGIDVPSANTIIINRA 898          
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A661BW16_9GAMM (Transcription-repair-coupling factor n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BW16_9GAMM)

HSP 1 Score: 774 bits (1998), Expect = 8.890e-267
Identity = 398/646 (61.61%), Postives = 490/646 (75.85%), Query Frame = 0
Query:    1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLSGDE-VGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQRR-RRRATTDQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 644
            VY+DV +GLAPAGIEYYLPLF+++ + L DYLP + + I DE      E F   +  RYEQ RHDVERP++ P  +F  P++LL+  K Y  + ++     E  G   + T  P  + IDAR+A P +L    +    GR+LL+A+S GRRE++L+LFQQ   +P   D+W+EF+     +G+ VA L  GA+++ P ++L++EGQLFGER  QRR R+R   D E +IRNLTEL  GAPVVHE+HGVGRY  L  L VG +  EFI IEYADGD LYVPVSALD ISR++GVDP+HAPLH+LGSGQWEKA+RKA +++ DVAAELLE+HA+RAAR G  F +D   + AF   FPFEETP Q++AI  V+ DM  A+PMDRLVCGD GFGKTEVAMRA+FIAV +G QVAILVPTTLLA+QHY++ KDRFADWPVR+  LSRF   KE   TL GI DGTVDIV+GTHKL+  +I F RLGLL+IDEEHRFGVRQKEK KA+RA+ID+LTLTATPIPRTLNMALA  RE SIIAT P++RLA+KTFVREW+++LL+EA+LREI RGGQVY +HN+VE IE+MA+ V  + PEA +  AHGQM E ELE VMLDFYH R NVL+CTTIIET IDVP+AN +IINRA
Sbjct:  253 VYRDVSQGLAPAGIEYYLPLFYEETNTLFDYLPDECITIFDEDAIDTSESFWQDIETRYEQNRHDVERPVLPPRDMFLNPSDLLSRTKIYHQIHITHREQQERAGASNYDTTLPASLMIDARSADPLSLFKRFVSDFDGRILLVAESAGRRETLLDLFQQHDIKPVQLDNWSEFIQGQDRLGLTVAPLEHGAQLENPGIALISEGQLFGERVMQRRLRKRKQQDSENIIRNLTELTLGAPVVHEEHGVGRYQGLIALDVGDIPAEFIYIEYADGDKLYVPVSALDLISRFTGVDPEHAPLHRLGSGQWEKAKRKAAKRVHDVAAELLELHAQRAARPGFNFELDENAYRAFVQTFPFEETPGQMDAIMDVIDDMTQAKPMDRLVCGDAGFGKTEVAMRASFIAVQNGKQVAILVPTTLLAQQHYQNFKDRFADWPVRVELLSRFRTGKEQNITLKGIEDGTVDIVIGTHKLIQGNIEFARLGLLIIDEEHRFGVRQKEKFKAIRAEIDVLTLTATPIPRTLNMALADLREFSIIATPPAKRLAVKTFVREWNDALLKEALLREIKRGGQVYVLHNKVETIEKMARQVEALLPEASVRWAHGQMPEKELEQVMLDFYHRRFNVLVCTTIIETGIDVPSANTIIINRA 898          
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A369C9H2_9GAMM (Transcription-repair-coupling factor n=1 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369C9H2_9GAMM)

HSP 1 Score: 764 bits (1972), Expect = 9.640e-263
Identity = 395/646 (61.15%), Postives = 490/646 (75.85%), Query Frame = 0
Query:    2 YQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLSGDE-VGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQRRRRRATT--DQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 644
            YQDV +G+APAG+EYYLPLFF+    L DYLP  TLV     V +  E F     ER+EQLRHD   PL+ PARLF    EL A L AY+ V++     D       FAT  P  + +D RA  P   L   +    GRVLL A++ GRRES+LEL QQ P +PRA DSW  F+ S+A   IAVA L +G  +    L+++TE QLFGE+  QRRRR  T   D +AV+R+LTELR GA VVHE+HGVGRY+ L+V+ +G    EF+ +EYA GD LYVPVS+L  +SRY+GVDPD APLH+LGS QW+KARRKA E++RDVAAELL+++ARRAARKGHAF      +AAF  +FPFEETPDQ  AIE VLAD++  +PMDRLVCGDVGFGKTEVAMRAAF+AV DG QVA+LVPTTLLA+QHY++ +DRFADWPVRI  LSRF   ++   TL  +ADG  DIV+GTHKLL +++RFKRLGL++IDEEHRFGVRQKE++K LR+++DILTLTATPIPRTLNMA++G R+LSIIAT P+RRL+IKTFVRE +++++REAILRE+ RGGQVY++HNEVE+IE +A+ V  + PEAR+++AHGQMRE ELE VM DFYH R NVL+CTTIIET ID+P AN +I++RA
Sbjct:  262 YQDVSQGIAPAGVEYYLPLFFESCATLFDYLPEATLVTYTAGVLSSAETFWDEAGERHEQLRHDSSHPLLPPARLFLQAHELFASLAAYSRVEIHRDPLDPGAAHRNFATDPPPSLTVDRRAEQPLQRLAGFLDAFAGRVLLCAETAGRRESLLELLQQLPLQPRACDSWQSFVDSEAQAAIAVAPLDQGILLPAGGLAVITESQLFGEQIRQRRRRVRTRERDSDAVVRDLTELRTGAAVVHEEHGVGRYLGLQVIQLGDQAGEFLTLEYAGGDKLYVPVSSLHLVSRYTGVDPDQAPLHRLGSEQWQKARRKAAEQVRDVAAELLDLYARRAARKGHAFDYATDQYAAFAESFPFEETPDQEQAIESVLADLRSPRPMDRLVCGDVGFGKTEVAMRAAFVAVQDGRQVAVLVPTTLLAQQHYDNFRDRFADWPVRIEVLSRFGGKRQQGETLDAVADGRADIVIGTHKLLQENVRFKRLGLVIIDEEHRFGVRQKERLKTLRSEVDILTLTATPIPRTLNMAISGMRDLSIIATPPARRLSIKTFVRERNSAVIREAILREVLRGGQVYYLHNEVESIERLAREVEALVPEARVSIAHGQMRERELERVMSDFYHRRFNVLVCTTIIETGIDIPTANTIIMDRA 907          
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A6N1DMC0_9GAMM (Transcription-repair-coupling factor n=1 Tax=Ectothiorhodospiraceae bacterium 2226 TaxID=2740164 RepID=A0A6N1DMC0_9GAMM)

HSP 1 Score: 761 bits (1966), Expect = 5.370e-262
Identity = 388/646 (60.06%), Postives = 482/646 (74.61%), Query Frame = 0
Query:    1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLS-GDEVGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQRRRRRATT-DQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 644
            +Y++V +G APAGIEYYLPLFFD    L DYLP  T+ +  E V    E +   +A RYEQ RHD +RPL+ P  +F    +L   L+A+A V+          G+   AT  P  + IDARA  P A L   +    GRVL  A++ GRRES+LEL +     P   + W  F + DA   I VA L +G  ++ P ++++TE QLFGER  QRRRRR  + D E V+R+L EL  GAPVVHE HGVGRY+ L+ L VGGVT EF+ +EYA GD LYVPVS+L  ISRY+G  P+ APLHKLGSGQWEKA+R+A E++RDVAAELL+I+ARRAAR+GHA  +D   +AAF A FPFEETPDQ  AI+ VL DM+  +PMDRLVCGDVGFGKTEVAMRAAF+AV DG QVA+LVPTTLL +QH ++ +DRFADWPVR+  LSRF   KE +A ++ + DGTVDIV+GTHKLL +DIRFKRLGL++IDEEHRFGVRQKE+ K+LRA++D+LTLTATPIPRTLNMALA  R+LS+IATAP+RRLA+KTFV EW+++L++EA LRE+ RGGQVYF+HN+VE IE  A+ +  + P+AR+AVAHGQMRE ELE VM DFYH R NVL+CTTIIET IDVP+AN ++INRA
Sbjct:  250 IYREVSQGNAPAGIEYYLPLFFDATATLFDYLPTGTVAVTVEDVHGAAETYWEEIAHRYEQRRHDTQRPLLPPLDMFLPTDQLFGALRAFARVESQRFEQAAGAGRSNLATQHPPPLAIDARATRPAARLQSFLAEFPGRVLFAAETAGRRESLLELLRGIDVTPTLVEDWRAFATGDAHCAITVAPLEQGLVLEHPPIAVVTEAQLFGERVLQRRRRRGRSRDSEQVVRSLAELTEGAPVVHEDHGVGRYLGLQTLDVGGVTTEFLTLEYAGGDKLYVPVSSLHLISRYAGAAPESAPLHKLGSGQWEKAKRRASERVRDVAAELLDIYARRAARQGHAAKLDDGQYAAFAAGFPFEETPDQQAAIDAVLEDMRAPRPMDRLVCGDVGFGKTEVAMRAAFVAVQDGRQVAVLVPTTLLVQQHTQTFRDRFADWPVRVEGLSRFRSKKEQEAVVSAVTDGTVDIVIGTHKLLQEDIRFKRLGLVIIDEEHRFGVRQKERFKSLRAEVDVLTLTATPIPRTLNMALASLRDLSVIATAPARRLAVKTFVHEWNDNLIQEACLREVKRGGQVYFLHNDVETIERQARELEALVPQARVAVAHGQMRERELERVMSDFYHHRYNVLVCTTIIETGIDVPSANTIVINRA 895          
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A523K7F5_9GAMM (Transcription-repair-coupling factor n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523K7F5_9GAMM)

HSP 1 Score: 761 bits (1966), Expect = 5.880e-262
Identity = 391/646 (60.53%), Postives = 485/646 (75.08%), Query Frame = 0
Query:    1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLSGDE-VGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQRR-RRRATTDQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 644
            VY+DV +G APAGIEYYLPLF+     L DYLP + + I DE V  + E F   +  RYEQ RHDVERP++ P  +F    +LL+  K Y  + +S +  DE  G   + T  P  + IDAR+A P  +    I    GR+LL+A+S GRRE++L+LFQQ   +P  +  W+EFL     +G+ VA L +GA++D PR+++++EGQLFGER  QRR R+R   D E++IRNLTEL  GAPV+HE+HGVGRY  L  L VG +  EFI IEYA+GD LYVPVSALD ISR++GVDP+HAPLH+LGSGQWEKARRKA +++ DVAAELLE+HA+RAAR G  F +D   + AF  +FPFEETP Q++AI  V+ DM   +PMDRLVCGD GFGKTEVAMRA+FIAV +  QVAILVPTTLLA+QHY++  DRFADWPVR+  LSRF   KE +  + GI DG VDIV+GTHKL+   I F RLGLL+IDEEHRFGVRQKEK KA+RA+ID+LTLTATPIPRTLNMAL+  RE SIIAT P++RLA+KTFVREW+++LL+EA+LREI RGGQVY +HN+VE IE+MA+ V  + PEA + +AHGQM E  LE VMLDFYH R NVL+CTTIIET IDVP+AN +IINRA
Sbjct:  253 VYRDVSQGFAPAGIEYYLPLFYKDTSTLFDYLPDNCITIFDEDVIDVSESFWQDIETRYEQTRHDVERPVLPPREMFLNLHDLLSRTKNYHQIHISHMEQDERAGTSNYDTTLPPSLTIDARSAQPLLIFKRFISGFAGRILLVAESAGRRETLLDLFQQHQIKPVQYADWSEFLHGKERLGLTVAPLEQGAQLDNPRIAIVSEGQLFGERVMQRRLRKRKQQDSESIIRNLTELTLGAPVIHEEHGVGRYQGLITLEVGDIPAEFIFIEYAEGDKLYVPVSALDLISRFTGVDPEHAPLHRLGSGQWEKARRKAAKRVYDVAAELLELHAQRAARSGFNFELDEDAYRAFVQSFPFEETPGQMDAISAVIDDMTQGKPMDRLVCGDAGFGKTEVAMRASFIAVQNSKQVAILVPTTLLAQQHYQNFIDRFADWPVRVELLSRFRTGKEQEEAIKGIEDGKVDIVIGTHKLIQGKIDFARLGLLIIDEEHRFGVRQKEKFKAIRAEIDVLTLTATPIPRTLNMALSDLREFSIIATPPAKRLAVKTFVREWNDALLKEALLREIKRGGQVYVLHNKVETIEKMARQVESLLPEASVRIAHGQMPEKTLEQVMLDFYHRRFNVLVCTTIIETGIDVPSANTIIINRA 898          
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A251XAS7_9GAMM (Transcription-repair-coupling factor n=1 Tax=Thioflexithrix psekupsensis TaxID=1570016 RepID=A0A251XAS7_9GAMM)

HSP 1 Score: 761 bits (1964), Expect = 1.070e-261
Identity = 388/645 (60.16%), Postives = 490/645 (75.97%), Query Frame = 0
Query:    1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLSGDEVGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQRRRR-RATTDQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 644
            VYQDV +  APAGIEYYLPLFF++   L DYLP   L+   + V  + ++F     +RYEQLRHD+ERPL+ P+ LF    E+ A ++ +  + +     D      F T  P  + ++AR A P A L + +    GRVL+ A+++GRRESM+ELF+    RP   ++WA+FL   AA+ I VA L  G  + +P L ++ E QLFGER +QRRRR + T D + V+RNLTEL  GAPVVHE+HGVGRY+ L  LT+ G+T EF+ +EYA+ D LYVPVSAL  ISR++GVDP+HAPLH+LGSGQWEKA+RKA +K+ DVAAELL+IHA+RAAR+GHAF  D   +AAF   FPFEETPDQ  AI  V+ DM   + MDRL+CGDVGFGKTEVAMRAAFIAV+DG QVA+LVPTTLLA+QHY++ +DRFA+WPV+I QLSRF   K+ +  L+ IADG +DI++GTHKLL   I FKRLGL++IDEEHRFGV+QKE+ KALRA++DILTLTATPIPR+LNMALA  RELSIIAT PSRRLAIKTFV+EW    + EAI+RE+ RGGQVYF+HN++++IE+MAQTV+E+ PEAR+ +AHGQ+RE ELE VM DFYH R NVL+CTTIIET IDVP+AN +II+RA
Sbjct:  252 VYQDVSQKFAPAGIEYYLPLFFEETATLFDYLPPGGLICTVDNVTEIADQFWQEANQRYEQLRHDIERPLLAPSTLFLQTHEVFAAIRHHPHLDIRP---DHPSAHIFLTQPPPLLTVEARQADPLATLKQFLNNFQGRVLIAAETMGRRESMMELFRTHDIRPVVVENWADFLQHSAALCITVAPLERGLYLTDPLLVVICEAQLFGERVSQRRRRNKITRDTDTVVRNLTELSIGAPVVHEEHGVGRYLGLVTLTLNGITAEFLHLEYANQDKLYVPVSALHLISRFTGVDPEHAPLHRLGSGQWEKAKRKAAQKVTDVAAELLDIHAKRAARQGHAFRYDPKDYAAFVQRFPFEETPDQQEAILAVIRDMTSEKSMDRLICGDVGFGKTEVAMRAAFIAVSDGQQVAVLVPTTLLAQQHYQNFQDRFAEWPVKIEQLSRFRSKKQQETALSQIADGQIDIIIGTHKLLQDPIHFKRLGLVIIDEEHRFGVKQKERFKALRAEVDILTLTATPIPRSLNMALADLRELSIIATPPSRRLAIKTFVKEWHAPSISEAIMRELRRGGQVYFLHNDIDSIEKMAQTVSELVPEARVDIAHGQLRERELERVMRDFYHRRFNVLVCTTIIETGIDVPSANTIIIHRA 893          
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A2N2AHD3_9GAMM (Transcription-repair-coupling factor n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2N2AHD3_9GAMM)

HSP 1 Score: 759 bits (1961), Expect = 2.950e-261
Identity = 388/647 (59.97%), Postives = 481/647 (74.34%), Query Frame = 0
Query:    1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLSGD-EVGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQRRRR--RATTDQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 644
            +Y+DV  GLAP GIEYYLPLFF+    L DYLPA TLV+  E  E   + F     ER+EQLRH++ERPL+ P  +F    E+L  L AY   ++     +   G   FA   P  + +D R+  P A L   +    GRVL   +S GRRE++L+L      +PRA +SW EFL SD A+G+ VA L +G  + +P L+++ E QL+GE+  QRRRR  RAT D +AVIRNL EL+PGAPVVHE+HGVGRY+ ++ L  GG+  EF+ +EYA GD LYVPVS+L  ISRY+G  P+ APLHKLGSGQWEKA+RKA EK+RDVAAELL I+A+RAARKGHA+ +D AG+ AF A FPFE TPDQ  AI+ V+ DM+  QPMDRLVCGDVGFGKTEVAMRAAF+AV  G QVA+LVPTTLLA+QHYE+ +DRFADWPVRI  LSRF   KE    + G+  G VDI++GTHKLL ++I+ +RLGL++IDEEHRFGVRQKE+ KALRA++D+LTLTATPIPRTLNM+LA  R+LSIIATAP+RRLA+KTFV EW   L+ EA LREI RGGQVYF+HN+V+ IE+M Q +A + PEA +  AHGQMRE ELE VM DFYH R N+L+CTTIIET ID+P+AN ++INRA
Sbjct:  252 IYRDVSNGLAPPGIEYYLPLFFEHTHTLFDYLPAQTLVLSTEGAEDAADGFWGECKERHEQLRHNIERPLLPPENIFLRGDEVLGALAAYPRTQLQRFELEPRAGHHNFACDNPPSLTLDVRSEHPTAALRRFLGEFQGRVLFAVESAGRREALLDLLGGAEIKPRAVESWQEFLDSDIALGLLVAPLEQGLLLQDPPLAVIAEPQLYGEQVMQRRRRKVRATRDSDAVIRNLAELQPGAPVVHEEHGVGRYLGMQTLDTGGIEQEFLTLEYAGGDKLYVPVSSLHLISRYTGAAPESAPLHKLGSGQWEKAKRKASEKVRDVAAELLAIYAQRAARKGHAYKMDWAGYQAFAAGFPFETTPDQQAAIDAVINDMETPQPMDRLVCGDVGFGKTEVAMRAAFVAVMGGKQVAMLVPTTLLAQQHYENFRDRFADWPVRIESLSRFRTRKEQDQVIEGLQQGKVDIIIGTHKLLQENIKLERLGLVIIDEEHRFGVRQKERFKALRAEVDVLTLTATPIPRTLNMSLANIRDLSIIATAPARRLAVKTFVTEWQQPLIHEACLREIKRGGQVYFLHNDVDTIEKMEQELAALIPEATVRHAHGQMRERELERVMSDFYHQRFNILVCTTIIETGIDIPSANTIVINRA 898          
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A7C1D0T7_9GAMM (Transcription-repair-coupling factor n=1 Tax=Thioalkalivibrio sp. TaxID=2093813 RepID=A0A7C1D0T7_9GAMM)

HSP 1 Score: 758 bits (1958), Expect = 8.860e-261
Identity = 390/647 (60.28%), Postives = 484/647 (74.81%), Query Frame = 0
Query:    1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLSGDEVGQ--MEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQ-RRRRRATTDQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 644
            +Y++V  G APAGIEYY+PLFF+Q+  L DYLP D LVI  E VEA  ERF   +A+RYEQ RHDV+RPL+ P +LF APAEL AGL   + V + G   ++       FA+ +   + + ARA  P A L   I    GR+L +A+S GRRE ++E  +Q    PR  + W EF+  D    I VA L  G  + E  ++++ E  LFG+RA Q RRR+R T D +AV+RNLT+L  GAPVVHE+HGVGRY+ L+ L +GG   EF+ +EYA GD LYVPVS+L  ISRY+G  P+ APLHKLGS QW+KAR KA EKI DVAAELL+I+ARRAAR+GHAF  D   +AAF A+FPFEETPDQ  AIE VL DM   +PMDR+VCGDVGFGKTEVAMRAAF+A + G QVA+LVPTTLLA+QH ++ +DR ADWP+RI  LSRF   K+ K TLAGIA GTVDIV+GTHKLL  D++FK LGL ++DEEHRFGVR KEK+K LRA++DILTLTATPIPRTLNM+L+G R+LSIIAT P +R AIKTFV EW+++LL+EA+LRE+ RGGQVYF+HNEV+ IE+MAQ + ++ P+  + +AHGQMRE ELE VMLDFYH R N+LLCTTI+E+ IDVP AN +IINRA
Sbjct:  250 IYREVSNGSAPAGIEYYIPLFFEQMSTLFDYLPEDALVIALEDVEAAAERFVAGLADRYEQRRHDVQRPLLAPDQLFLAPAELAAGLDRQSRVFIQGFEIEDADATAQNFASLSLPNLLLQARAEDPAAALRSFIASRPGRLLFVAESAGRREHLIEALRQFELFPRTVEGWPEFIDGDLDYAITVAPLESGVRLPEAGINIIPESALFGQRAQQERRRKRPTRDADAVVRNLTDLNVGAPVVHEEHGVGRYIGLQKLEIGGSETEFLTLEYAGGDKLYVPVSSLHLISRYTGTAPEDAPLHKLGSNQWQKARCKAAEKIHDVAAELLDINARRAARRGHAFATDTDEYAAFAASFPFEETPDQQKAIEAVLEDMAAERPMDRVVCGDVGFGKTEVAMRAAFVAASGGKQVAVLVPTTLLAQQHLQNFRDRLADWPIRIEGLSRFRSQKQHKETLAGIAAGTVDIVIGTHKLLQGDVKFKDLGLNIVDEEHRFGVRDKEKLKNLRAEVDILTLTATPIPRTLNMSLSGLRDLSIIATPPVQRHAIKTFVSEWNDALLQEAVLREVRRGGQVYFLHNEVQTIEKMAQRIQQVVPDVSVRIAHGQMRERELEEVMLDFYHQRFNILLCTTIVESGIDVPTANTIIINRA 896          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DBQ9_9GAMM1.100e-28864.34Transcription-repair-coupling factor n=1 Tax=Gamma... [more]
A0A1Z9UIZ4_9GAMM8.040e-28864.81Transcription-repair-coupling factor n=2 Tax=Gamma... [more]
A0A1G0JBZ0_9GAMM9.770e-26960.22Transcription-repair-coupling factor n=1 Tax=Gamma... [more]
A0A661BW16_9GAMM8.890e-26761.61Transcription-repair-coupling factor n=2 Tax=Gamma... [more]
A0A369C9H2_9GAMM9.640e-26361.15Transcription-repair-coupling factor n=1 Tax=Thioa... [more]
A0A6N1DMC0_9GAMM5.370e-26260.06Transcription-repair-coupling factor n=1 Tax=Ectot... [more]
A0A523K7F5_9GAMM5.880e-26260.53Transcription-repair-coupling factor n=1 Tax=Gamma... [more]
A0A251XAS7_9GAMM1.070e-26160.16Transcription-repair-coupling factor n=1 Tax=Thiof... [more]
A0A2N2AHD3_9GAMM2.950e-26159.97Transcription-repair-coupling factor n=2 Tax=Gamma... [more]
A0A7C1D0T7_9GAMM8.860e-26160.28Transcription-repair-coupling factor n=1 Tax=Thioa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003711CarD-like/TRCF domainSMARTSM01058CarD_TRCF_2coord: 232..329
e-value: 5.5E-46
score: 168.8
IPR003711CarD-like/TRCF domainPFAMPF02559CarD_CdnL_TRCFcoord: 233..326
e-value: 1.6E-25
score: 89.6
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 353..543
e-value: 3.3E-30
score: 116.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 371..532
score: 23.750347
NoneNo IPR availableGENE3D3.40.50.11140coord: 111..207
e-value: 5.8E-20
score: 73.0
NoneNo IPR availableGENE3D3.40.50.11180coord: 1..105
e-value: 3.0E-25
score: 90.6
NoneNo IPR availableGENE3D2.40.10.170coord: 236..294
e-value: 7.2E-181
score: 604.2
NoneNo IPR availablePANTHERPTHR14025FANCONI ANEMIA GROUP M FANCM FAMILY MEMBERcoord: 163..644
NoneNo IPR availablePANTHERPTHR14025:SF29TRANSCRIPTION-REPAIR-COUPLING FACTORcoord: 163..644
NoneNo IPR availableCDDcd17991DEXHc_TRCFcoord: 358..534
e-value: 1.37324E-113
score: 336.466
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 231..644
e-value: 7.2E-181
score: 604.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 295..534
e-value: 7.2E-181
score: 604.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 276..536
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 536..642
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..98
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 108..219
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 358..518
e-value: 3.5E-18
score: 66.0
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 559..641
e-value: 5.9E-11
score: 42.7
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 553..644
score: 8.850789
IPR036101CarD-like/TRCF domain superfamilySUPERFAMILY141259CarD-likecoord: 223..301

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12802contigP-wetherbeei_contig12802:1..1932 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12802.1.1mRNA_P-wetherbeei_contig12802.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12802 1..1932 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12802.1.1 ID=prot_P-wetherbeei_contig12802.1.1|Name=mRNA_P-wetherbeei_contig12802.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=644bp
VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGER
FGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLSG
DEVGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRR
ESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSL
LTEGQLFGERAAQRRRRRATTDQEAVIRNLTELRPGAPVVHEQHGVGRYV
RLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHK
LGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFE
AAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFI
AVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKA
TLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKA
LRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWS
NSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQ
MRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003711CarD-like/TRCF_domain
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
IPR036101CarD-like/TRCF_dom_sf