mRNA_P-wetherbeei_contig12802.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A3D5DBQ9_9GAMM (Transcription-repair-coupling factor n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DBQ9_9GAMM) HSP 1 Score: 830 bits (2143), Expect = 1.100e-288 Identity = 415/645 (64.34%), Postives = 513/645 (79.53%), Query Frame = 1 Query: 1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLS-GDEVGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQRRRRRATTDQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 1932 +Y D+ GLAPAGIEYYLPLFFD LD L DY+P+D+L+ VDE +EA RF AV +RYEQLR+D+ERP++ P R+F ++L LK Y +S L G+ F T ++ ID AA+P L+ +K GRVL LADS GRRE+MLELF RP+ F SW +FL+ VG+AVA+L EG E+ P + L+TE QLFGERA QRRRRR D++++I++L EL+ G+PVVHE HG+GRY LEVLT+G NEFIK+EYADGD LYVPV++L+ I+RYSGVDP HAP+HKLGSGQWE+A+++A + I DVAAELLE+HARR AR G+ FT+DR + AF FPFEETPDQ +AIE VL DM+ +PMDRLVCGDVGFGKTEVAMRAAF+A N+G QVA+LVPTTLLA+QHY++ DRFADWP+R+ LSRF + ET+ LAG+ GTVDIV+GTHKLLG D+ FK LGLL+IDEEHRFGVRQKEKIKA+R+D+DILTLTATPIPR+LN+AL+GTRELSII+TAPS+RLAIKTF+REWS+ L++EA+LREI RGGQVYFVHNEVE+IE++A+ +A +AP AR++ AHGQMRE ELE VMLDFYH RCN+L+CTTIIE+ IDVPNAN +IINRA Sbjct: 252 IYNDISGGLAPAGIEYYLPLFFDHLDTLFDYIPSDSLIFVDEELEAGATRFREAVNDRYEQLRYDMERPILPPDRMFLNLEDVLESLKMYPRTHLSSLDLGENEKNFRFNTRAGAKLTIDGHAASPLRLVLSFLKNYDGRVLFLADSNGRRETMLELFNSNNIRPKFFGSWEDFLNGTDTVGLAVASLSEGVELVNPAICLVTEFQLFGERALQRRRRRTRLDKDSIIKSLAELQLGSPVVHEDHGIGRYRGLEVLTIGSTENEFIKLEYADGDKLYVPVASLNLINRYSGVDPAHAPIHKLGSGQWERAKKRATKCIYDVAAELLEVHARREARAGYRFTLDRDAYTAFCQDFPFEETPDQQDAIEAVLVDMENIRPMDRLVCGDVGFGKTEVAMRAAFVAANEGRQVAVLVPTTLLAQQHYQTFLDRFADWPIRVKPLSRFRAANETRTVLAGLRAGTVDIVIGTHKLLGADVVFKDLGLLIIDEEHRFGVRQKEKIKAIRSDVDILTLTATPIPRSLNLALSGTRELSIISTAPSKRLAIKTFLREWSDGLVQEALLREISRGGQVYFVHNEVESIEKIAKDIARLAPAARVSFAHGQMREKELERVMLDFYHRRCNILVCTTIIESGIDVPNANTIIINRA 896
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A1Z9UIZ4_9GAMM (Transcription-repair-coupling factor n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UIZ4_9GAMM) HSP 1 Score: 827 bits (2137), Expect = 8.040e-288 Identity = 418/645 (64.81%), Postives = 511/645 (79.22%), Query Frame = 1 Query: 1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLSGDEVGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQ-RRRRRATTDQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 1932 +Y DV EGLAPAGIEYYLPLF ++ ++L+DY+P+D +VI DE++E ++F ++V ERYE LRHD RP++ +FA EL + L+ ACV +SG S + +F T PV VP+DAR+ PF + H+ R GR+L LADSLGRRE++L+LF+ Q F P F W EFL +D GIAVA+L GAE+ EPRLS+LTE QLFG R Q RRR+R+ E++IRNLTEL +PVVHE +GVGRY+ LEVLTVG + NEFIKIEY DGD LY+PV +LD ISRYSG DP+HAPLHKLG+ QWEKARRKA EKIRDVAAELLEIHA+RA R+G +F +D + +F +FPFEET DQ NA++ VL DMQ QPMDRL+CGDVGFGKTEVA+RAA +AVNDG QVAILVPTTLLA QH+E+ +DRFA PVR+ LSRF + K+T+ + + GTVDIV+GTHKLL K+I+FKRLGLLV+DEEHRFGV QKEKIK+LRAD+DILTLTATPIPRTLN+AL+GTRELSIIAT P +RLA+KTFVREWS +L+REAILREI RGGQVY+VHN+VE+IE+ + + I PEARIAVAHGQMRE +LE VMLDF HGR NVL+C+TIIET +D+PNAN M+INRA Sbjct: 250 IYXDVSEGLAPAGIEYYLPLFHEETNVLADYIPSDCVVIFDESIEIAADKFRLSVDERYEALRHDTARPILATKDIFAEFEELQSSLQTLACVYLSGTSNSD-SPAKFNTVVPVNVPVDARSEDPFIAIKHHLSRMNGRLLFLADSLGRREALLDLFRDQIFSPVVFAGWREFLGADERYGIAVASLENGAELIEPRLSILTESQLFGRRTXQXRRRKRSRXSHESIIRNLTELNVNSPVVHEDYGVGRYLGLEVLTVGDIQNEFIKIEYRDGDKLYIPVGSLDLISRYSGSDPEHAPLHKLGTDQWEKARRKAGEKIRDVAAELLEIHAKRALRRGXSFVIDEDAYNSFVHSFPFEETVDQANAVDAVLKDMQNPQPMDRLICGDVGFGKTEVALRAACVAVNDGFQVAILVPTTLLATQHHETFRDRFAKLPVRVELLSRFRNIKQTREVVGALESGTVDIVIGTHKLLSKEIKFKRLGLLVVDEEHRFGVVQKEKIKSLRADVDILTLTATPIPRTLNLALSGTRELSIIATPPLKRLAVKTFVREWSKTLIREAILREISRGGQVYYVHNQVESIEKEVKKLERIVPEARIAVAHGQMREQQLEQVMLDFSHGRINVLVCSTIIETGLDIPNANTMLINRA 893
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A1G0JBZ0_9GAMM (Transcription-repair-coupling factor n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_12_47_11 TaxID=1798301 RepID=A0A1G0JBZ0_9GAMM) HSP 1 Score: 779 bits (2011), Expect = 9.770e-269 Identity = 389/646 (60.22%), Postives = 498/646 (77.09%), Query Frame = 1 Query: 1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLS-GDEVGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQRR-RRRATTDQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 1932 VY+DV +GLAPAGIEYYLPLF+ + + L DY+ D +VI+DE + E F + +RYEQ RHD+ERPL+ P L+ + +L +K + + V+G++ G+ + ++T PV++PIDAR P +L I GR L+ A+S GRRE++LE+F+Q P F W+ FLS+ +G+ AAL +GA+I +P + +++E QLFG+R QRR R+R D EA+IRNLTEL GAPVVHE +GVGRY L L + + EFI IEYA D LYVPV++LD ISRY+GVDP+HAPLH+LGSGQWEKA++KA +++ DVAAELL++HARR AR G++FTVD + AF +FPFEETP Q +AI+ V+ DMQ +PMDRL+CGD GFGKTEVAMRAAFIAV +G QVA+LVPTTLLA+QHY++ KDRFADWPV+I LSRF KE + L G+ADGTVDIV+GTHKL+ +++F+RLGLL+IDEEHRFGVRQKEK KALR++ID+LTLTATPIPRTLNMAL+ RELSIIAT P+RRL++KTFVREWSNSLLREA+LREI RGGQVYF++N++E IE+ A+ + + PEAR+ +AHGQM E ELE VMLDFYH R NVL+CTTIIET IDVP+AN +IINRA Sbjct: 253 VYRDVSQGLAPAGIEYYLPLFYQETNTLFDYIADDAVVILDEDIRQTMEGFWKDIEDRYEQCRHDIERPLLPPGELYLSQQDLFTRIKPFTRIYVTGMAQGERAHAINYSTSIPVQLPIDARLPEPLGVLKRFIDGFEGRTLIAAESSGRRETLLEMFRQHALFPTQFPDWSAFLSATDKLGLVTAALEQGAQISDPEIVIISESQLFGDRVQQRRLRKRRQQDSEAIIRNLTELTAGAPVVHEDNGVGRYQGLVTLNINDIPAEFICIEYAQSDKLYVPVASLDLISRYAGVDPEHAPLHRLGSGQWEKAKQKAAQRVYDVAAELLDMHARRLARSGNSFTVDENEYFAFIQSFPFEETPGQADAIKAVIEDMQQPKPMDRLICGDAGFGKTEVAMRAAFIAVQNGRQVALLVPTTLLAQQHYQNFKDRFADWPVKIESLSRFRTGKEQEKVLQGLADGTVDIVIGTHKLIQNNVKFQRLGLLIIDEEHRFGVRQKEKFKALRSEIDVLTLTATPIPRTLNMALSSLRELSIIATPPARRLSVKTFVREWSNSLLREALLREINRGGQVYFLYNQIETIEKTAREIETLMPEARVRIAHGQMPEKELEQVMLDFYHRRFNVLVCTTIIETGIDVPSANTIIINRA 898
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A661BW16_9GAMM (Transcription-repair-coupling factor n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BW16_9GAMM) HSP 1 Score: 774 bits (1998), Expect = 8.890e-267 Identity = 398/646 (61.61%), Postives = 490/646 (75.85%), Query Frame = 1 Query: 1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLSGDE-VGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQRR-RRRATTDQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 1932 VY+DV +GLAPAGIEYYLPLF+++ + L DYLP + + I DE E F + RYEQ RHDVERP++ P +F P++LL+ K Y + ++ E G + T P + IDAR+A P +L + GR+LL+A+S GRRE++L+LFQQ +P D+W+EF+ +G+ VA L GA+++ P ++L++EGQLFGER QRR R+R D E +IRNLTEL GAPVVHE+HGVGRY L L VG + EFI IEYADGD LYVPVSALD ISR++GVDP+HAPLH+LGSGQWEKA+RKA +++ DVAAELLE+HA+RAAR G F +D + AF FPFEETP Q++AI V+ DM A+PMDRLVCGD GFGKTEVAMRA+FIAV +G QVAILVPTTLLA+QHY++ KDRFADWPVR+ LSRF KE TL GI DGTVDIV+GTHKL+ +I F RLGLL+IDEEHRFGVRQKEK KA+RA+ID+LTLTATPIPRTLNMALA RE SIIAT P++RLA+KTFVREW+++LL+EA+LREI RGGQVY +HN+VE IE+MA+ V + PEA + AHGQM E ELE VMLDFYH R NVL+CTTIIET IDVP+AN +IINRA Sbjct: 253 VYRDVSQGLAPAGIEYYLPLFYEETNTLFDYLPDECITIFDEDAIDTSESFWQDIETRYEQNRHDVERPVLPPRDMFLNPSDLLSRTKIYHQIHITHREQQERAGASNYDTTLPASLMIDARSADPLSLFKRFVSDFDGRILLVAESAGRRETLLDLFQQHDIKPVQLDNWSEFIQGQDRLGLTVAPLEHGAQLENPGIALISEGQLFGERVMQRRLRKRKQQDSENIIRNLTELTLGAPVVHEEHGVGRYQGLIALDVGDIPAEFIYIEYADGDKLYVPVSALDLISRFTGVDPEHAPLHRLGSGQWEKAKRKAAKRVHDVAAELLELHAQRAARPGFNFELDENAYRAFVQTFPFEETPGQMDAIMDVIDDMTQAKPMDRLVCGDAGFGKTEVAMRASFIAVQNGKQVAILVPTTLLAQQHYQNFKDRFADWPVRVELLSRFRTGKEQNITLKGIEDGTVDIVIGTHKLIQGNIEFARLGLLIIDEEHRFGVRQKEKFKAIRAEIDVLTLTATPIPRTLNMALADLREFSIIATPPAKRLAVKTFVREWNDALLKEALLREIKRGGQVYVLHNKVETIEKMARQVEALLPEASVRWAHGQMPEKELEQVMLDFYHRRFNVLVCTTIIETGIDVPSANTIIINRA 898
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A369C9H2_9GAMM (Transcription-repair-coupling factor n=1 Tax=Thioalbus denitrificans TaxID=547122 RepID=A0A369C9H2_9GAMM) HSP 1 Score: 764 bits (1972), Expect = 9.640e-263 Identity = 395/646 (61.15%), Postives = 490/646 (75.85%), Query Frame = 1 Query: 4 YQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLSGDE-VGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQRRRRRATT--DQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 1932 YQDV +G+APAG+EYYLPLFF+ L DYLP TLV V + E F ER+EQLRHD PL+ PARLF EL A L AY+ V++ D FAT P + +D RA P L + GRVLL A++ GRRES+LEL QQ P +PRA DSW F+ S+A IAVA L +G + L+++TE QLFGE+ QRRRR T D +AV+R+LTELR GA VVHE+HGVGRY+ L+V+ +G EF+ +EYA GD LYVPVS+L +SRY+GVDPD APLH+LGS QW+KARRKA E++RDVAAELL+++ARRAARKGHAF +AAF +FPFEETPDQ AIE VLAD++ +PMDRLVCGDVGFGKTEVAMRAAF+AV DG QVA+LVPTTLLA+QHY++ +DRFADWPVRI LSRF ++ TL +ADG DIV+GTHKLL +++RFKRLGL++IDEEHRFGVRQKE++K LR+++DILTLTATPIPRTLNMA++G R+LSIIAT P+RRL+IKTFVRE +++++REAILRE+ RGGQVY++HNEVE+IE +A+ V + PEAR+++AHGQMRE ELE VM DFYH R NVL+CTTIIET ID+P AN +I++RA Sbjct: 262 YQDVSQGIAPAGVEYYLPLFFESCATLFDYLPEATLVTYTAGVLSSAETFWDEAGERHEQLRHDSSHPLLPPARLFLQAHELFASLAAYSRVEIHRDPLDPGAAHRNFATDPPPSLTVDRRAEQPLQRLAGFLDAFAGRVLLCAETAGRRESLLELLQQLPLQPRACDSWQSFVDSEAQAAIAVAPLDQGILLPAGGLAVITESQLFGEQIRQRRRRVRTRERDSDAVVRDLTELRTGAAVVHEEHGVGRYLGLQVIQLGDQAGEFLTLEYAGGDKLYVPVSSLHLVSRYTGVDPDQAPLHRLGSEQWQKARRKAAEQVRDVAAELLDLYARRAARKGHAFDYATDQYAAFAESFPFEETPDQEQAIESVLADLRSPRPMDRLVCGDVGFGKTEVAMRAAFVAVQDGRQVAVLVPTTLLAQQHYDNFRDRFADWPVRIEVLSRFGGKRQQGETLDAVADGRADIVIGTHKLLQENVRFKRLGLVIIDEEHRFGVRQKERLKTLRSEVDILTLTATPIPRTLNMAISGMRDLSIIATPPARRLSIKTFVRERNSAVIREAILREVLRGGQVYYLHNEVESIERLAREVEALVPEARVSIAHGQMRERELERVMSDFYHRRFNVLVCTTIIETGIDIPTANTIIMDRA 907
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A6N1DMC0_9GAMM (Transcription-repair-coupling factor n=1 Tax=Ectothiorhodospiraceae bacterium 2226 TaxID=2740164 RepID=A0A6N1DMC0_9GAMM) HSP 1 Score: 761 bits (1966), Expect = 5.370e-262 Identity = 388/646 (60.06%), Postives = 482/646 (74.61%), Query Frame = 1 Query: 1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLS-GDEVGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQRRRRRATT-DQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 1932 +Y++V +G APAGIEYYLPLFFD L DYLP T+ + E V E + +A RYEQ RHD +RPL+ P +F +L L+A+A V+ G+ AT P + IDARA P A L + GRVL A++ GRRES+LEL + P + W F + DA I VA L +G ++ P ++++TE QLFGER QRRRRR + D E V+R+L EL GAPVVHE HGVGRY+ L+ L VGGVT EF+ +EYA GD LYVPVS+L ISRY+G P+ APLHKLGSGQWEKA+R+A E++RDVAAELL+I+ARRAAR+GHA +D +AAF A FPFEETPDQ AI+ VL DM+ +PMDRLVCGDVGFGKTEVAMRAAF+AV DG QVA+LVPTTLL +QH ++ +DRFADWPVR+ LSRF KE +A ++ + DGTVDIV+GTHKLL +DIRFKRLGL++IDEEHRFGVRQKE+ K+LRA++D+LTLTATPIPRTLNMALA R+LS+IATAP+RRLA+KTFV EW+++L++EA LRE+ RGGQVYF+HN+VE IE A+ + + P+AR+AVAHGQMRE ELE VM DFYH R NVL+CTTIIET IDVP+AN ++INRA Sbjct: 250 IYREVSQGNAPAGIEYYLPLFFDATATLFDYLPTGTVAVTVEDVHGAAETYWEEIAHRYEQRRHDTQRPLLPPLDMFLPTDQLFGALRAFARVESQRFEQAAGAGRSNLATQHPPPLAIDARATRPAARLQSFLAEFPGRVLFAAETAGRRESLLELLRGIDVTPTLVEDWRAFATGDAHCAITVAPLEQGLVLEHPPIAVVTEAQLFGERVLQRRRRRGRSRDSEQVVRSLAELTEGAPVVHEDHGVGRYLGLQTLDVGGVTTEFLTLEYAGGDKLYVPVSSLHLISRYAGAAPESAPLHKLGSGQWEKAKRRASERVRDVAAELLDIYARRAARQGHAAKLDDGQYAAFAAGFPFEETPDQQAAIDAVLEDMRAPRPMDRLVCGDVGFGKTEVAMRAAFVAVQDGRQVAVLVPTTLLVQQHTQTFRDRFADWPVRVEGLSRFRSKKEQEAVVSAVTDGTVDIVIGTHKLLQEDIRFKRLGLVIIDEEHRFGVRQKERFKSLRAEVDVLTLTATPIPRTLNMALASLRDLSVIATAPARRLAVKTFVHEWNDNLIQEACLREVKRGGQVYFLHNDVETIERQARELEALVPQARVAVAHGQMRERELERVMSDFYHHRYNVLVCTTIIETGIDVPSANTIVINRA 895
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A523K7F5_9GAMM (Transcription-repair-coupling factor n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523K7F5_9GAMM) HSP 1 Score: 761 bits (1966), Expect = 5.880e-262 Identity = 391/646 (60.53%), Postives = 485/646 (75.08%), Query Frame = 1 Query: 1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLSGDE-VGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQRR-RRRATTDQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 1932 VY+DV +G APAGIEYYLPLF+ L DYLP + + I DE V + E F + RYEQ RHDVERP++ P +F +LL+ K Y + +S + DE G + T P + IDAR+A P + I GR+LL+A+S GRRE++L+LFQQ +P + W+EFL +G+ VA L +GA++D PR+++++EGQLFGER QRR R+R D E++IRNLTEL GAPV+HE+HGVGRY L L VG + EFI IEYA+GD LYVPVSALD ISR++GVDP+HAPLH+LGSGQWEKARRKA +++ DVAAELLE+HA+RAAR G F +D + AF +FPFEETP Q++AI V+ DM +PMDRLVCGD GFGKTEVAMRA+FIAV + QVAILVPTTLLA+QHY++ DRFADWPVR+ LSRF KE + + GI DG VDIV+GTHKL+ I F RLGLL+IDEEHRFGVRQKEK KA+RA+ID+LTLTATPIPRTLNMAL+ RE SIIAT P++RLA+KTFVREW+++LL+EA+LREI RGGQVY +HN+VE IE+MA+ V + PEA + +AHGQM E LE VMLDFYH R NVL+CTTIIET IDVP+AN +IINRA Sbjct: 253 VYRDVSQGFAPAGIEYYLPLFYKDTSTLFDYLPDNCITIFDEDVIDVSESFWQDIETRYEQTRHDVERPVLPPREMFLNLHDLLSRTKNYHQIHISHMEQDERAGTSNYDTTLPPSLTIDARSAQPLLIFKRFISGFAGRILLVAESAGRRETLLDLFQQHQIKPVQYADWSEFLHGKERLGLTVAPLEQGAQLDNPRIAIVSEGQLFGERVMQRRLRKRKQQDSESIIRNLTELTLGAPVIHEEHGVGRYQGLITLEVGDIPAEFIFIEYAEGDKLYVPVSALDLISRFTGVDPEHAPLHRLGSGQWEKARRKAAKRVYDVAAELLELHAQRAARSGFNFELDEDAYRAFVQSFPFEETPGQMDAISAVIDDMTQGKPMDRLVCGDAGFGKTEVAMRASFIAVQNSKQVAILVPTTLLAQQHYQNFIDRFADWPVRVELLSRFRTGKEQEEAIKGIEDGKVDIVIGTHKLIQGKIDFARLGLLIIDEEHRFGVRQKEKFKAIRAEIDVLTLTATPIPRTLNMALSDLREFSIIATPPAKRLAVKTFVREWNDALLKEALLREIKRGGQVYVLHNKVETIEKMARQVESLLPEASVRIAHGQMPEKTLEQVMLDFYHRRFNVLVCTTIIETGIDVPSANTIIINRA 898
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A251XAS7_9GAMM (Transcription-repair-coupling factor n=1 Tax=Thioflexithrix psekupsensis TaxID=1570016 RepID=A0A251XAS7_9GAMM) HSP 1 Score: 761 bits (1964), Expect = 1.070e-261 Identity = 388/645 (60.16%), Postives = 490/645 (75.97%), Query Frame = 1 Query: 1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLSGDEVGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQRRRR-RATTDQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 1932 VYQDV + APAGIEYYLPLFF++ L DYLP L+ + V + ++F +RYEQLRHD+ERPL+ P+ LF E+ A ++ + + + D F T P + ++AR A P A L + + GRVL+ A+++GRRESM+ELF+ RP ++WA+FL AA+ I VA L G + +P L ++ E QLFGER +QRRRR + T D + V+RNLTEL GAPVVHE+HGVGRY+ L LT+ G+T EF+ +EYA+ D LYVPVSAL ISR++GVDP+HAPLH+LGSGQWEKA+RKA +K+ DVAAELL+IHA+RAAR+GHAF D +AAF FPFEETPDQ AI V+ DM + MDRL+CGDVGFGKTEVAMRAAFIAV+DG QVA+LVPTTLLA+QHY++ +DRFA+WPV+I QLSRF K+ + L+ IADG +DI++GTHKLL I FKRLGL++IDEEHRFGV+QKE+ KALRA++DILTLTATPIPR+LNMALA RELSIIAT PSRRLAIKTFV+EW + EAI+RE+ RGGQVYF+HN++++IE+MAQTV+E+ PEAR+ +AHGQ+RE ELE VM DFYH R NVL+CTTIIET IDVP+AN +II+RA Sbjct: 252 VYQDVSQKFAPAGIEYYLPLFFEETATLFDYLPPGGLICTVDNVTEIADQFWQEANQRYEQLRHDIERPLLAPSTLFLQTHEVFAAIRHHPHLDIRP---DHPSAHIFLTQPPPLLTVEARQADPLATLKQFLNNFQGRVLIAAETMGRRESMMELFRTHDIRPVVVENWADFLQHSAALCITVAPLERGLYLTDPLLVVICEAQLFGERVSQRRRRNKITRDTDTVVRNLTELSIGAPVVHEEHGVGRYLGLVTLTLNGITAEFLHLEYANQDKLYVPVSALHLISRFTGVDPEHAPLHRLGSGQWEKAKRKAAQKVTDVAAELLDIHAKRAARQGHAFRYDPKDYAAFVQRFPFEETPDQQEAILAVIRDMTSEKSMDRLICGDVGFGKTEVAMRAAFIAVSDGQQVAVLVPTTLLAQQHYQNFQDRFAEWPVKIEQLSRFRSKKQQETALSQIADGQIDIIIGTHKLLQDPIHFKRLGLVIIDEEHRFGVKQKERFKALRAEVDILTLTATPIPRSLNMALADLRELSIIATPPSRRLAIKTFVKEWHAPSISEAIMRELRRGGQVYFLHNDIDSIEKMAQTVSELVPEARVDIAHGQLRERELERVMRDFYHRRFNVLVCTTIIETGIDVPSANTIIIHRA 893
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A2N2AHD3_9GAMM (Transcription-repair-coupling factor n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2N2AHD3_9GAMM) HSP 1 Score: 759 bits (1961), Expect = 2.950e-261 Identity = 388/647 (59.97%), Postives = 481/647 (74.34%), Query Frame = 1 Query: 1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLSGD-EVGQMEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQRRRR--RATTDQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 1932 +Y+DV GLAP GIEYYLPLFF+ L DYLPA TLV+ E E + F ER+EQLRH++ERPL+ P +F E+L L AY ++ + G FA P + +D R+ P A L + GRVL +S GRRE++L+L +PRA +SW EFL SD A+G+ VA L +G + +P L+++ E QL+GE+ QRRRR RAT D +AVIRNL EL+PGAPVVHE+HGVGRY+ ++ L GG+ EF+ +EYA GD LYVPVS+L ISRY+G P+ APLHKLGSGQWEKA+RKA EK+RDVAAELL I+A+RAARKGHA+ +D AG+ AF A FPFE TPDQ AI+ V+ DM+ QPMDRLVCGDVGFGKTEVAMRAAF+AV G QVA+LVPTTLLA+QHYE+ +DRFADWPVRI LSRF KE + G+ G VDI++GTHKLL ++I+ +RLGL++IDEEHRFGVRQKE+ KALRA++D+LTLTATPIPRTLNM+LA R+LSIIATAP+RRLA+KTFV EW L+ EA LREI RGGQVYF+HN+V+ IE+M Q +A + PEA + AHGQMRE ELE VM DFYH R N+L+CTTIIET ID+P+AN ++INRA Sbjct: 252 IYRDVSNGLAPPGIEYYLPLFFEHTHTLFDYLPAQTLVLSTEGAEDAADGFWGECKERHEQLRHNIERPLLPPENIFLRGDEVLGALAAYPRTQLQRFELEPRAGHHNFACDNPPSLTLDVRSEHPTAALRRFLGEFQGRVLFAVESAGRREALLDLLGGAEIKPRAVESWQEFLDSDIALGLLVAPLEQGLLLQDPPLAVIAEPQLYGEQVMQRRRRKVRATRDSDAVIRNLAELQPGAPVVHEEHGVGRYLGMQTLDTGGIEQEFLTLEYAGGDKLYVPVSSLHLISRYTGAAPESAPLHKLGSGQWEKAKRKASEKVRDVAAELLAIYAQRAARKGHAYKMDWAGYQAFAAGFPFETTPDQQAAIDAVINDMETPQPMDRLVCGDVGFGKTEVAMRAAFVAVMGGKQVAMLVPTTLLAQQHYENFRDRFADWPVRIESLSRFRTRKEQDQVIEGLQQGKVDIIIGTHKLLQENIKLERLGLVIIDEEHRFGVRQKERFKALRAEVDVLTLTATPIPRTLNMSLANIRDLSIIATAPARRLAVKTFVTEWQQPLIHEACLREIKRGGQVYFLHNDVDTIEKMEQELAALIPEATVRHAHGQMRERELERVMSDFYHQRFNILVCTTIIETGIDIPSANTIVINRA 898
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Match: A0A7C1D0T7_9GAMM (Transcription-repair-coupling factor n=1 Tax=Thioalkalivibrio sp. TaxID=2093813 RepID=A0A7C1D0T7_9GAMM) HSP 1 Score: 758 bits (1958), Expect = 8.860e-261 Identity = 390/647 (60.28%), Postives = 484/647 (74.81%), Query Frame = 1 Query: 1 VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERFGVAVAERYEQLRHDVERPLVKPARLFAAPAELLAGLKAYACVKVSGLSGDEVGQ--MEFATHTPVRVPIDARAAAPFALLDEHIKRCTGRVLLLADSLGRRESMLELFQQQPFRPRAFDSWAEFLSSDAAVGIAVAALHEGAEIDEPRLSLLTEGQLFGERAAQ-RRRRRATTDQEAVIRNLTELRPGAPVVHEQHGVGRYVRLEVLTVGGVTNEFIKIEYADGDNLYVPVSALDRISRYSGVDPDHAPLHKLGSGQWEKARRKAHEKIRDVAAELLEIHARRAARKGHAFTVDRAGFAAFEAAFPFEETPDQLNAIEGVLADMQGAQPMDRLVCGDVGFGKTEVAMRAAFIAVNDGHQVAILVPTTLLARQHYESLKDRFADWPVRIGQLSRFSDSKETKATLAGIADGTVDIVVGTHKLLGKDIRFKRLGLLVIDEEHRFGVRQKEKIKALRADIDILTLTATPIPRTLNMALAGTRELSIIATAPSRRLAIKTFVREWSNSLLREAILREIGRGGQVYFVHNEVENIEEMAQTVAEIAPEARIAVAHGQMRESELEHVMLDFYHGRCNVLLCTTIIETAIDVPNANNMIINRA 1932 +Y++V G APAGIEYY+PLFF+Q+ L DYLP D LVI E VEA ERF +A+RYEQ RHDV+RPL+ P +LF APAEL AGL + V + G ++ FA+ + + + ARA P A L I GR+L +A+S GRRE ++E +Q PR + W EF+ D I VA L G + E ++++ E LFG+RA Q RRR+R T D +AV+RNLT+L GAPVVHE+HGVGRY+ L+ L +GG EF+ +EYA GD LYVPVS+L ISRY+G P+ APLHKLGS QW+KAR KA EKI DVAAELL+I+ARRAAR+GHAF D +AAF A+FPFEETPDQ AIE VL DM +PMDR+VCGDVGFGKTEVAMRAAF+A + G QVA+LVPTTLLA+QH ++ +DR ADWP+RI LSRF K+ K TLAGIA GTVDIV+GTHKLL D++FK LGL ++DEEHRFGVR KEK+K LRA++DILTLTATPIPRTLNM+L+G R+LSIIAT P +R AIKTFV EW+++LL+EA+LRE+ RGGQVYF+HNEV+ IE+MAQ + ++ P+ + +AHGQMRE ELE VMLDFYH R N+LLCTTI+E+ IDVP AN +IINRA Sbjct: 250 IYREVSNGSAPAGIEYYIPLFFEQMSTLFDYLPEDALVIALEDVEAAAERFVAGLADRYEQRRHDVQRPLLAPDQLFLAPAELAAGLDRQSRVFIQGFEIEDADATAQNFASLSLPNLLLQARAEDPAAALRSFIASRPGRLLFVAESAGRREHLIEALRQFELFPRTVEGWPEFIDGDLDYAITVAPLESGVRLPEAGINIIPESALFGQRAQQERRRKRPTRDADAVVRNLTDLNVGAPVVHEEHGVGRYIGLQKLEIGGSETEFLTLEYAGGDKLYVPVSSLHLISRYTGTAPEDAPLHKLGSNQWQKARCKAAEKIHDVAAELLDINARRAARRGHAFATDTDEYAAFAASFPFEETPDQQKAIEAVLEDMAAERPMDRVVCGDVGFGKTEVAMRAAFVAASGGKQVAVLVPTTLLAQQHLQNFRDRLADWPIRIEGLSRFRSQKQHKETLAGIAAGTVDIVIGTHKLLQGDVKFKDLGLNIVDEEHRFGVRDKEKLKNLRAEVDILTLTATPIPRTLNMSLSGLRDLSIIATPPVQRHAIKTFVSEWNDALLQEAVLREVRRGGQVYFLHNEVQTIEKMAQRIQQVVPDVSVRIAHGQMRERELEEVMLDFYHQRFNILLCTTIVESGIDVPTANTIIINRA 896 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12802.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12802.1.1 >prot_P-wetherbeei_contig12802.1.1 ID=prot_P-wetherbeei_contig12802.1.1|Name=mRNA_P-wetherbeei_contig12802.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=644bp VYQDVGEGLAPAGIEYYLPLFFDQLDLLSDYLPADTLVIVDEAVEAMGERback to top mRNA from alignment at P-wetherbeei_contig12802:1..1932- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12802.1.1 ID=mRNA_P-wetherbeei_contig12802.1.1|Name=mRNA_P-wetherbeei_contig12802.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1932bp|location=Sequence derived from alignment at P-wetherbeei_contig12802:1..1932- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12802:1..1932- >mRNA_P-wetherbeei_contig12802.1.1 ID=mRNA_P-wetherbeei_contig12802.1.1|Name=mRNA_P-wetherbeei_contig12802.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1932bp|location=Sequence derived from alignment at P-wetherbeei_contig12802:1..1932- (Phaeothamnion wetherbeei SAG_119_79)back to top |