prot_P-wetherbeei_contig1214.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1214.2.1
Unique Nameprot_P-wetherbeei_contig1214.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length65
Homology
BLAST of mRNA_P-wetherbeei_contig1214.2.1 vs. uniprot
Match: R7TC80_CAPTE (Nucleolar protein 10 n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TC80_CAPTE)

HSP 1 Score: 101 bits (251), Expect = 6.340e-27
Identity = 47/61 (77.05%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 MHLMYYLDESGKRVYTLQKMDPQGGQTLSAHPARFSPDDQFSKQRINNKLRYGLLPTQQPK 61
            M LMYYL ESG+RVYT++K+DP G  T SAHPARFSPDDQFSKQR  NK R+GLLPTQQPK
Sbjct:    1 MFLMYYLSESGERVYTMEKVDPNGKPTYSAHPARFSPDDQFSKQRYLNKKRFGLLPTQQPK 61          
BLAST of mRNA_P-wetherbeei_contig1214.2.1 vs. uniprot
Match: L8H2Y9_ACACA (Nucleolar protein 10 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H2Y9_ACACA)

HSP 1 Score: 98.6 bits (244), Expect = 7.420e-26
Identity = 43/60 (71.67%), Postives = 53/60 (88.33%), Query Frame = 0
Query:    1 MHLMYYLDESGKRVYTLQKMDPQGGQTLSAHPARFSPDDQFSKQRINNKLRYGLLPTQQP 60
            MHLMYYLD+ GKRVYTL+K +P+G  T+SAHPARFSPDD+FS+QR+  K R+G+LPTQQP
Sbjct:    1 MHLMYYLDKDGKRVYTLKKSNPEGTATVSAHPARFSPDDKFSRQRVTLKKRFGILPTQQP 60          
BLAST of mRNA_P-wetherbeei_contig1214.2.1 vs. uniprot
Match: J9Q3Z9_OSTED (Nucleolar protein 10 (Fragment) n=1 Tax=Ostrea edulis TaxID=37623 RepID=J9Q3Z9_OSTED)

HSP 1 Score: 98.2 bits (243), Expect = 1.670e-25
Identity = 46/62 (74.19%), Postives = 52/62 (83.87%), Query Frame = 0
Query:    1 MHLMYYLDESGKRVYTLQKMDPQGGQTLSAHPARFSPDDQFSKQRINNKLRYGLLPTQQPKV 62
            M LMYYL+ESG +VYTL+K DP G  TLSAHPARFSPDD+FSKQR+  K R+GLLPTQQPK 
Sbjct:   18 MLLMYYLNESGDKVYTLKKTDPMGCPTLSAHPARFSPDDKFSKQRVTLKKRFGLLPTQQPKA 79          
BLAST of mRNA_P-wetherbeei_contig1214.2.1 vs. uniprot
Match: UPI0006C94F3D (H/ACA ribonucleoprotein complex subunit 3 n=1 Tax=Copidosoma floridanum TaxID=29053 RepID=UPI0006C94F3D)

HSP 1 Score: 97.4 bits (241), Expect = 2.130e-25
Identity = 43/60 (71.67%), Postives = 53/60 (88.33%), Query Frame = 0
Query:    1 MHLMYYLDESGKRVYTLQKMDPQGGQTLSAHPARFSPDDQFSKQRINNKLRYGLLPTQQP 60
            M+LMYYLD++G R+YTL+KMDP G  TLSAHPARFSP+D++SK+RI  K R+GLLPTQQP
Sbjct:    1 MYLMYYLDDNGNRIYTLKKMDPYGKPTLSAHPARFSPEDKYSKERITLKRRFGLLPTQQP 60          
BLAST of mRNA_P-wetherbeei_contig1214.2.1 vs. uniprot
Match: A0A061SA74_9CHLO (Nucleolar protein 10 n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SA74_9CHLO)

HSP 1 Score: 96.3 bits (238), Expect = 6.110e-25
Identity = 43/64 (67.19%), Postives = 53/64 (82.81%), Query Frame = 0
Query:    1 MHLMYYLDESGKRVYTLQKMDPQGGQTLSAHPARFSPDDQFSKQRINNKLRYGLLPTQQPKVQL 64
            M+LMYYLD+SG RVY+L+K  P G  TLSAHPARFSPDD+FSK+R+  K R+G+LPTQQP  +L
Sbjct:    1 MYLMYYLDDSGNRVYSLKKSTPDGSPTLSAHPARFSPDDKFSKERVTIKKRFGILPTQQPAPEL 64          
BLAST of mRNA_P-wetherbeei_contig1214.2.1 vs. uniprot
Match: A0A0L0HHH4_SPIPD (H/ACA ribonucleoprotein complex subunit NOP10 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HHH4_SPIPD)

HSP 1 Score: 96.3 bits (238), Expect = 6.270e-25
Identity = 43/59 (72.88%), Postives = 51/59 (86.44%), Query Frame = 0
Query:    1 MHLMYYLDESGKRVYTLQKMDPQGGQTLSAHPARFSPDDQFSKQRINNKLRYGLLPTQQ 59
            MHLMYYLDESGKRVYTL+K+ P+G  T SAHPARFSPDD++S+ R+  K R+GLLPTQQ
Sbjct:    1 MHLMYYLDESGKRVYTLKKLTPEGSVTKSAHPARFSPDDKYSRHRVTLKRRFGLLPTQQ 59          
BLAST of mRNA_P-wetherbeei_contig1214.2.1 vs. uniprot
Match: K3WVP2_GLOUD (Nucleolar protein 10 n=3 Tax=Pythiaceae TaxID=4782 RepID=K3WVP2_GLOUD)

HSP 1 Score: 95.5 bits (236), Expect = 1.270e-24
Identity = 45/60 (75.00%), Postives = 49/60 (81.67%), Query Frame = 0
Query:    1 MHLMYYLDESGKRVYTLQKMDPQGGQTLSAHPARFSPDDQFSKQRINNKLRYGLLPTQQP 60
            MHLMYYL E GKRVYTL+K DP G  T SAHPARFSPDD+FSK+RI  K R+GLLPTQ P
Sbjct:    1 MHLMYYLGEDGKRVYTLKKEDPSGKPTHSAHPARFSPDDKFSKERIITKKRFGLLPTQTP 60          
BLAST of mRNA_P-wetherbeei_contig1214.2.1 vs. uniprot
Match: H3G7J4_PHYRM (Nucleolar protein 10 n=16 Tax=Peronosporaceae TaxID=4777 RepID=H3G7J4_PHYRM)

HSP 1 Score: 94.4 bits (233), Expect = 3.270e-24
Identity = 43/60 (71.67%), Postives = 48/60 (80.00%), Query Frame = 0
Query:    1 MHLMYYLDESGKRVYTLQKMDPQGGQTLSAHPARFSPDDQFSKQRINNKLRYGLLPTQQP 60
            MHLMYYL + GKRVYTL+K  P G  T SAHPARFSPDD+FSK+RI  K R+GLLPTQ P
Sbjct:    1 MHLMYYLGDDGKRVYTLKKETPAGSPTCSAHPARFSPDDKFSKERITTKKRFGLLPTQSP 60          
BLAST of mRNA_P-wetherbeei_contig1214.2.1 vs. uniprot
Match: K8F2J5_9CHLO (Nucleolar protein 10 n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8F2J5_9CHLO)

HSP 1 Score: 94.4 bits (233), Expect = 3.540e-24
Identity = 45/63 (71.43%), Postives = 52/63 (82.54%), Query Frame = 0
Query:    1 MHLMYYLDESGKRVYTLQKMDPQGGQTLSAHPARFSPDDQFSKQRINNKLRYGLLPTQQPKVQ 63
            M+LMYYL+E GKRVYTL+K  P G  TLSAHPARFSPDD+FSKQR+  K R+GLL TQQP+ Q
Sbjct:    1 MYLMYYLNEDGKRVYTLKKTGPDGKPTLSAHPARFSPDDKFSKQRVACKKRFGLLLTQQPEKQ 63          
BLAST of mRNA_P-wetherbeei_contig1214.2.1 vs. uniprot
Match: A0A836CEE6_9STRA (Nucleolar protein 10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEE6_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 3.540e-24
Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 0
Query:    1 MHLMYYLDESGKRVYTLQKMDPQGGQTLSAHPARFSPDDQFSKQRINNKLRYGLLPTQQPKVQL 64
            MHLMYY+ E GKRVYTL+K DP G  T+SAHPARFSPDD+FS QR+ NK R+G+L TQ P  +L
Sbjct:    1 MHLMYYMGEDGKRVYTLKKEDPTGSPTVSAHPARFSPDDKFSHQRVVNKKRFGILLTQSPAPEL 64          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1214.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7TC80_CAPTE6.340e-2777.05Nucleolar protein 10 n=1 Tax=Capitella teleta TaxI... [more]
L8H2Y9_ACACA7.420e-2671.67Nucleolar protein 10 n=1 Tax=Acanthamoeba castella... [more]
J9Q3Z9_OSTED1.670e-2574.19Nucleolar protein 10 (Fragment) n=1 Tax=Ostrea edu... [more]
UPI0006C94F3D2.130e-2571.67H/ACA ribonucleoprotein complex subunit 3 n=1 Tax=... [more]
A0A061SA74_9CHLO6.110e-2567.19Nucleolar protein 10 n=1 Tax=Tetraselmis sp. GSL01... [more]
A0A0L0HHH4_SPIPD6.270e-2572.88H/ACA ribonucleoprotein complex subunit NOP10 n=2 ... [more]
K3WVP2_GLOUD1.270e-2475.00Nucleolar protein 10 n=3 Tax=Pythiaceae TaxID=4782... [more]
H3G7J4_PHYRM3.270e-2471.67Nucleolar protein 10 n=16 Tax=Peronosporaceae TaxI... [more]
K8F2J5_9CHLO3.540e-2471.43Nucleolar protein 10 n=1 Tax=Bathycoccus prasinos ... [more]
A0A836CEE6_9STRA3.540e-2467.19Nucleolar protein 10 n=1 Tax=Tribonema minus TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007264H/ACA ribonucleoprotein complex, subunit Nop10PFAMPF04135Nop10pcoord: 3..52
e-value: 3.4E-20
score: 71.8
IPR007264H/ACA ribonucleoprotein complex, subunit Nop10PANTHERPTHR13305RIBOSOME BIOGENESIS PROTEIN NOP10coord: 1..62
NoneNo IPR availableGENE3D4.10.80.300coord: 1..30
e-value: 6.0E-16
score: 59.8
NoneNo IPR availablePANTHERPTHR13305:SF0H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 3coord: 1..62
IPR036756H/ACA ribonucleoprotein complex, subunit Nop10 superfamilySUPERFAMILY144210Nop10-like SnoRNPcoord: 2..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1214contigP-wetherbeei_contig1214:1218..1549 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1214.2.1mRNA_P-wetherbeei_contig1214.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1214 1094..1549 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1214.2.1 ID=prot_P-wetherbeei_contig1214.2.1|Name=mRNA_P-wetherbeei_contig1214.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=65bp
MHLMYYLDESGKRVYTLQKMDPQGGQTLSAHPARFSPDDQFSKQRINNKL
RYGLLPTQQPKVQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007264H/ACA_rnp_Nop10
IPR036756H/ACA_rnp_Nop10_sf