prot_P-wetherbeei_contig10344.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10344.2.1
Unique Nameprot_P-wetherbeei_contig10344.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length196
Homology
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BLAST of mRNA_P-wetherbeei_contig10344.2.1 vs. uniprot
Match: A0A835YMN2_9STRA (Polycystin cation channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMN2_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.980e-20
Identity = 56/154 (36.36%), Postives = 95/154 (61.69%), Query Frame = 0 
Query:   39 QNVSESANAAANAAVGVIAVSTEQYALKKGLEYDKNKIKSLKLLMLYCVFLAVFLAVILLPEDIGGSYDSSNAVQAALVETEWGVRSMFGDIGATGDIYYFLQTVMLPALFTNAWYNGVSFPLNSTMAP--PWFLDDTNLVLGAARLRQVREKK 190
            +N++      A+ A  ++  S ++ A +  ++YD  K K++K L+LYCVFLAVF++V+ LP+DIG S+D  +AV AA++  E  VR  + ++ +  + + F++  +LP+ FT+A YNG +      +A      L + +LVLG  RLRQ+R K+
Sbjct:  260 RNLATKVGQGADEARKLVTDSGDEVARRHNVKYDAAKTKAIKWLVLYCVFLAVFVSVVFLPKDIGASFDMYSAVNAAILRQEVMVRKTWEEVTSVPETFKFVREALLPSAFTDAHYNGEALGSQGAIAQYKQRMLSENSLVLGKLRLRQMRVKQ 413
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10344.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YMN2_9STRA1.980e-2036.36Polycystin cation channel-domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 127..190
e-value: 1.5E-4
score: 20.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10344contigP-wetherbeei_contig10344:1393..2364 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10344.2.1mRNA_P-wetherbeei_contig10344.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10344 1314..2364 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10344.2.1 ID=prot_P-wetherbeei_contig10344.2.1|Name=mRNA_P-wetherbeei_contig10344.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=196bp
MRRISALAGPRPGGRRNSVLDVARDAVSSAARNVTGAVQNVSESANAAAN
AAVGVIAVSTEQYALKKGLEYDKNKIKSLKLLMLYCVFLAVFLAVILLPE
DIGGSYDSSNAVQAALVETEWGVRSMFGDIGATGDIYYFLQTVMLPALFT
NAWYNGVSFPLNSTMAPPWFLDDTNLVLGAARLRQVREKKRDGGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013122PKD1_2_channel