prot_P-wetherbeei_contig10109.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10109.1.1
Unique Nameprot_P-wetherbeei_contig10109.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length607
Homology
BLAST of mRNA_P-wetherbeei_contig10109.1.1 vs. uniprot
Match: D7G1B1_ECTSI (Calmodulin-like myosin-light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B1_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 4.460e-23
Identity = 107/340 (31.47%), Postives = 136/340 (40.00%), Query Frame = 0
Query:  116 GHERAVTALAYLPVSMLLASAAADGRVRLWDPCAANHRLVHPG----------------------TAGHVRRWPGHYIRPLDRWTTAGAPFGCVLQLDVAAXXXXXXXXXXXXXXXXGVYAAPTAXXXXXXXXXXXXXXXXXXXXXXXXVTAMEAVVSEAHPTSGRILCPEEDERLAATLDAGSAAAYHGA-------GIGGGGRDRSGCRGFLYLMDDGDLLAVSS-EAFHRRYVLLADAGFFEVSGAVRRPPTE---------AMALRAAFRQRARVLRVLYAVSTAHHTLRALCRAVRAVNAAVQASGALNG-FPGARFVVFYRVGDGPSSDVSDRI 415
            G+   VT L YLP+SMLL S  +DGRVR+WDPC   H+L  P                       +  H R +PG Y    + WT  G  F CV                       G  A                            V   E+V       + R +  EE    A+ +   + A +  A       G GGG         F Y    GD+L+V S + F   YVLL DA FFEVSG +               A +LRAAFR RA VLRVLYA ST    + A+ R +R    A +   AL+  FPG R  VFYR GDGP  D+++ +
Sbjct: 3249 GNRSPVTCLTYLPLSMLLVSGHSDGRVRVWDPCDRRHKLAPPPPQSLRALGSEDRETQSRKGGRRSGRHHRLFPGSYATTAEEWTEKGRTFSCVATFGAVPAKANTTERR-------GGAAGKNGRGGFLKIRELNSIVLPGGGAASLIVPDPESV------RAARAMDEEEPWDPASKIVVLTRARHKRAHSLIILPGNGGG---------FFYFTSSGDMLSVPSPKGFEEHYVLLDDASFFEVSGPLAAAQGGEQGGGGEGVAASLRAAFRARAGVLRVLYAASTGPRAVDAMARQMRDTGVAARPRRALDALFPGQRLAVFYREGDGPDRDITETV 3566          
BLAST of mRNA_P-wetherbeei_contig10109.1.1 vs. uniprot
Match: A0A7S3ZWD7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWD7_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 7.940e-8
Identity = 80/309 (25.89%), Postives = 114/309 (36.89%), Query Frame = 0
Query:  118 ERAVTALAYLPVSMLLASAAADGRVRLWDPCAANHRLVHPGTAGHVRRWPGHYIRPLDRWTTAGAPFGCVLQLDVAAXXXXXXXXXXXXXXXXGVYAAPTAXXXXXXXXXXXXXXXXXXXXXXXXVTAMEAVVSEAHPTSGRILCPEEDERLAATLDAGSAAAYHGAGIGGGGRDRSGCRGFLYLMDDGDLLAVSSEAFHRRYVLLA--DAGFFEVSGAVRRPPTEAMALRAAFRQRARVLRVLYAVSTAHHTLRALCRAVRAVNAAVQ---------ASGALNGFPGARFVVFYRVGDGPSSDVSDRI 415
            E +VTAL Y P+S LLASA+ADG ++LWDP      +V    A HV   PG+Y    D W    +     + L  A                                                  T ++ V         RI    E  R A  +D                 DR     +L+++DDGD++   +++F  R VLL   DA  FE   A          L+ AF++R R+LR+ Y  S+ H ++  L  A+++V  AV            G      G    +F R G  P  DV+  I
Sbjct: 2151 EASVTALTYAPLSGLLASASADGAIKLWDPRGDCRGVVAFSQAPHVCATPGYYRALEDEWCAVESCGAREVSLKSAIAHNPWGDSEGDELLSN--------------------------KRAKVQSTLLKTVSLALGAKESRIDASSEACRSARAID-----------------DRGDFVAYLFMLDDGDVIVSVADSFDYRCVLLRNKDAALFETGDA---------GLKRAFQERHRMLRIAYCSSSKHTSVSTLLTAIKSVADAVDRPLLARSRGGDGDTLQKLGLDLALFVRAGQDPREDVTHVI 2407          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10109.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1B1_ECTSI4.460e-2331.47Calmodulin-like myosin-light chain n=1 Tax=Ectocar... [more]
A0A7S3ZWD7_9STRA7.940e-825.89Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 107..146
e-value: 8.1E-6
score: 35.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 114..146
score: 14.318126
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 46..187
e-value: 3.8E-8
score: 34.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 536..558
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 536..550
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 114..146
score: 11.840134
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 52..64
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 39..74
score: 11.528597
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 35..70
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 112..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10109contigP-wetherbeei_contig10109:61..2198 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10109.1.1mRNA_P-wetherbeei_contig10109.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10109 61..2198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10109.1.1 ID=prot_P-wetherbeei_contig10109.1.1|Name=mRNA_P-wetherbeei_contig10109.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=607bp
IDAAELVAGLSEAREAALASLSAETATTSAAAAQALLRLTDDRLRGLCRL
FDGDGDGRIDYREFSRRLVVSGQRQRRFLATTTASSSVSTAAVTVDLRRE
AARLGLIVPATRVLLGHERAVTALAYLPVSMLLASAAADGRVRLWDPCAA
NHRLVHPGTAGHVRRWPGHYIRPLDRWTTAGAPFGCVLQLDVAAAAAAAA
FGANSGAGAGGVYAAPTAAIAAAKRGRILIGGSGSAAAAAAVVTAMEAVV
SEAHPTSGRILCPEEDERLAATLDAGSAAAYHGAGIGGGGRDRSGCRGFL
YLMDDGDLLAVSSEAFHRRYVLLADAGFFEVSGAVRRPPTEAMALRAAFR
QRARVLRVLYAVSTAHHTLRALCRAVRAVNAAVQASGALNGFPGARFVVF
YRVGDGPSSDVSDRIFQIAGGHGRSGQPSAAAGLSLRPAGAGIVGIVSRV
HPNGTVEVVWDGATRATTIGAETIAPLLGGGSVAQALPPTSIAGKAGTGA
VAAHNARLTTGMRIRMRSAGRSGFVAAGHNSSKSGSFARSCPTSGRVSGG
GTDSDGLGSAKVAGDASEVLCIETRDMAGGRQLSCWAIGRVALRVEARHF
DDSIDTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
IPR036322WD40_repeat_dom_sf