prot_P-wetherbeei_contig101.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig101.4.1
Unique Nameprot_P-wetherbeei_contig101.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length320
Homology
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BLAST of mRNA_P-wetherbeei_contig101.4.1 vs. uniprot
Match: A0A6A4Z6F3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z6F3_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.700e-7
Identity = 43/161 (26.71%), Postives = 76/161 (47.20%), Query Frame = 0 
Query:  152 RQITVTKPGGHNKRMECTGPTCPVFLTLGCGKKNS-ETSSTMWRVRSYCLGHVNCTSVAAPSIKQLQMLQAPVTATLSDFAVSS---KTMVNSLYGTTGLKITNRQALRARSAITKANEGGYAEGFMDMKGWLEEVADANPTSHTAFKVNSAGRFDAALIV 308
            + + V   GG+N+ + C+  TCP  +T     KN  + +   W + S    HV+CTS+A  + +Q+  L + V+A  ++  V +   +T V +L+    L   +R   RA+     A +      +  +  +LE +   NP S +  + +S GRF    IV
Sbjct:   44 KHVVVRTRGGNNRTVVCSSSTCPFQVTAYKTSKNPPDAAQPPWYISSVAPNHVDCTSIAMLTARQIAQLPSVVSAVQANRRVEASFLQTQVQALHAV-NLNGRSRTVYRAKQHACAALDNVELSSYKWLSSFLETLVSLNPGSASKCESDSEGRFQRCAIV 203
[Close]
BLAST of mRNA_P-wetherbeei_contig101.4.1 vs. uniprot
Match: A0A3R6X9F5_9STRA (SWIM-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6X9F5_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.260e-7
Identity = 43/161 (26.71%), Postives = 76/161 (47.20%), Query Frame = 0 
Query:  152 RQITVTKPGGHNKRMECTGPTCPVFLTLGCGKKNS-ETSSTMWRVRSYCLGHVNCTSVAAPSIKQLQMLQAPVTATLSDFAVSS---KTMVNSLYGTTGLKITNRQALRARSAITKANEGGYAEGFMDMKGWLEEVADANPTSHTAFKVNSAGRFDAALIV 308
            + + V   GG+N+ + C+  TCP  +T     KN  + +   W + S    HV+CTS+A  + +Q+  L + V+A  ++  V +   +T V +L+    L   +R   RA+     A +      +  +  +LE +   NP S +  + +S GRF    IV
Sbjct:   44 KHVVVRTRGGNNRTVVCSSSTCPFQVTAYKTSKNPPDAAQPPWYISSVAPNHVDCTSIAMLTARQIAQLPSVVSAVQANRRVEASFLQTQVQALHAV-NLNGRSRTVYRAKQHACAALDNVELSSYKWLSSFLETLVSLNPGSASKCESDSEGRFQRCAIV 203
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig101.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6A4Z6F3_9STRA1.700e-726.71Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A3R6X9F5_9STRA2.260e-726.71SWIM-type domain-containing protein n=2 Tax=Aphano... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig101contigP-wetherbeei_contig101:7148..8107 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig101.4.1mRNA_P-wetherbeei_contig101.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig101 7099..8359 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig101.4.1 ID=prot_P-wetherbeei_contig101.4.1|Name=mRNA_P-wetherbeei_contig101.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=320bp
MSSAPATSAPAPAPEGSGAASRCHLEEIGGHEQQVVQNPFTLRQGGGGGA
ARGLQAIQERGPPPASQSLAHYGPQARFLVPSSPSRPLSAPSTADMYNRE
AAFGHVGLDVHVENQDTDSNIFDPDIVDRQWPDGAEAVAAIKVWGLGNTP
PRQITVTKPGGHNKRMECTGPTCPVFLTLGCGKKNSETSSTMWRVRSYCL
GHVNCTSVAAPSIKQLQMLQAPVTATLSDFAVSSKTMVNSLYGTTGLKIT
NRQALRARSAITKANEGGYAEGFMDMKGWLEEVADANPTSHTAFKVNSAG
RFDAALIVLPRAAEVRFSL*
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