prot_P-wetherbeei_contig10036.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10036.1.1
Unique Nameprot_P-wetherbeei_contig10036.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length545
Homology
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BLAST of mRNA_P-wetherbeei_contig10036.1.1 vs. uniprot
Match: D7G5T8_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5T8_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 6.920e-53
Identity = 112/246 (45.53%), Postives = 154/246 (62.60%), Query Frame = 0 
Query:   26 QISWALEQAVHELGLAGRDSAAEKNWREMVLPDHLLQLARNDVRRYCGARGALKQSICTMSVTVEQAEEFFQLWPTLKSLGSTGTGPADWLSVLNLLCFGVAFAEGLVAPPPLGLASXXXXXXXXXXRGSVNANAVARQLLAETLSGDGRHMDLWMRDLSPPELSDVLRLVAKSAARLEKLTVGSSHTGGAGIGSFLAGAPSLREVELEWEGVRDVSVLASGLRHHPRLARLSLTHNFVGQAGAAQ 271
            +I  A+ +A+  LG+ G  S  E+NWR ++ P  +L+  R DV +Y  A+GALKQ++C++SV+++QAEEFF +W  L SLG   +   D L+VLNLL F V+ A+G   P                       +    ++LAE+L   G H+DLWM+DLSP +  ++LR V+ +  +L  LTVGSSHT GAG+GSFL G PSLRE+ELEWEGVRD+S +A  L  H  L RL+LTHN +G  GA Q
Sbjct:  359 RIERAVAEALDRLGINGTHSPPERNWRGVLQPCFVLRKTRQDVEKYSDAQGALKQAMCSLSVSIDQAEEFFLVWKYLASLGPCASN--DRLAVLNLLVFAVSVADGYCCPR--------------------RPSDFVGRVLAESLVTPG-HLDLWMKDLSPDDSRNILRAVSAAGKKLSILTVGSSHTAGAGVGSFLRGHPSLRELELEWEGVRDLSSIAQALGEHKSLTRLNLTHNEIGPRGALQ 581
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BLAST of mRNA_P-wetherbeei_contig10036.1.1 vs. uniprot
Match: A0A835Z0E5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0E5_9STRA)

HSP 1 Score: 142 bits (358), Expect = 3.450e-32
Identity = 99/263 (37.64%), Postives = 124/263 (47.15%), Query Frame = 0 
Query:   44 DSAAEKNWREMVLPDHLLQLARNDVRRYCGARGALKQSICTMSVTVEQAEEFFQLWPTL-KSLGSTGTGPADWLSVLNLLCFGVAFAEGLVAPPPLGLASXXXXXXXXXXRGSVNANAVARQLLAETLS------GDGRHMDLWMR-------------DLSPPELSDVLRLV---------------AKSAARLEKLTVGSSHTGGAGIGSFLAGAPSLREVELEWEGVRDVSVLASGLRHHPRLARLSLTHNFVGQAGAAQ 271
            +    KNW    L + L+   R DV   C A GAL+Q+IC+MSVT  QA EF + W  L +   +     A+ L+VLNLL FGVAF E  +APP                     A   A   L E+L       G G  +DLWM              DLSP +L  VL                   K    + +LTVGSSH+GGAG+G FLA   +L  +E+EWE VRDV  +  GLRH P L  L+LTHN +G  G  Q
Sbjct:  279 EDPVRKNWEHANLQNTLMDCVRKDVSGLCQAGGALRQAICSMSVTQPQAVEFTRTWHALLEGRWNACADKAERLAVLNLLHFGVAFFERRIAPP--------------------RAPGYAEATLLESLDAIPEGEGGGLALDLWMXXXXXXXXXXXXXXDLSPLDLCAVLEAARAHQSTSNAGGAAAGGKPTGPICRLTVGSSHSGGAGVGEFLAFNRALHTLEIEWEAVRDVEHICEGLRHAPGLLTLNLTHNSIGAEGGVQ 521
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10036.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5T8_ECTSI6.920e-5345.53Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A835Z0E5_9STRA3.450e-3237.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 363..386
e-value: 250.0
score: 0.3
coord: 279..306
e-value: 0.045
score: 22.9
coord: 251..278
e-value: 0.015
score: 24.5
coord: 307..334
e-value: 0.011
score: 25.0
coord: 335..362
e-value: 15.0
score: 8.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 402..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 493..518
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..458
NoneNo IPR availablePANTHERPTHR24114LEUCINE RICH REPEAT FAMILY PROTEINcoord: 199..318
NoneNo IPR availablePANTHERPTHR24114:SF30RICH REPEAT AND NACHT DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 199..318
NoneNo IPR availablePANTHERPTHR24114:SF30RICH REPEAT AND NACHT DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 214..378
NoneNo IPR availablePANTHERPTHR24114LEUCINE RICH REPEAT FAMILY PROTEINcoord: 214..378
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 175..380
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 279..301
e-value: 2.9E-5
score: 23.8
coord: 309..326
e-value: 0.0076
score: 16.3
coord: 335..356
e-value: 0.047
score: 13.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 302..392
e-value: 1.3E-17
score: 65.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 157..301
e-value: 1.1E-20
score: 75.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10036contigP-wetherbeei_contig10036:761..2395 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10036.1.1mRNA_P-wetherbeei_contig10036.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10036 670..2422 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10036.1.1 ID=prot_P-wetherbeei_contig10036.1.1|Name=mRNA_P-wetherbeei_contig10036.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=545bp
MLDGGSSGADGGAGGGGGVMGVAAAQISWALEQAVHELGLAGRDSAAEKN
WREMVLPDHLLQLARNDVRRYCGARGALKQSICTMSVTVEQAEEFFQLWP
TLKSLGSTGTGPADWLSVLNLLCFGVAFAEGLVAPPPLGLASSSGGGGGG
GGRGSVNANAVARQLLAETLSGDGRHMDLWMRDLSPPELSDVLRLVAKSA
ARLEKLTVGSSHTGGAGIGSFLAGAPSLREVELEWEGVRDVSVLASGLRH
HPRLARLSLTHNFVGQAGAAQLAEALKWNTTLTELDLRENCIGSVGLKQL
AIALALNGTLRTLHVQDNGVGDDGAIDITEALMRNTTLAVVSLDGNDITD
VGGRTLLIAVRENPALTQLSLGRNQLSDLLKEQLREVWDAREWPRPESAG
SGAGSGSGSGVSPPALPSTLPSMAFGRAGCGAVPPPPPSGLSGASPDGGG
LRRASTGATVASVKQKAAGMLLSPLAINRLHWDSSPSAGGAAAAGSAFRG
GQQQLSNNDGGGGGDALPAPVPRIIGFLSQTTRPQLIKPPVPVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf