mRNA_P-wetherbeei_contig9960.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9960.1.1 vs. uniprot
Match: D8LKU4_ECTSI (Formin-like 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKU4_ECTSI) HSP 1 Score: 69.7 bits (169), Expect = 7.130e-11 Identity = 54/149 (36.24%), Postives = 79/149 (53.02%), Query Frame = 1 Query: 25 LMSVAQADNIAIVLRALRRVGP----EQLGLALADWNSFPADELQLLHRCLPTDAELKVAAAFSGAVEELSPAERFLCAVAFGGVVAPERRLAALLLAEQFDGQLAR-IKAGLVTVMAAASQARGSARLRVILGRVLAIGNRLNAGTHK 456 L+ V + +N+AI L+A RRVG +L L ++LQ L CLPT EL+ AFSG L AE F A+ P +++A+L + QF G +A ++ + T+ A +A S RL +L +VL IGN LN GT++ Sbjct: 1130 LLDVNRGNNVAIGLKAFRRVGDVSELARLVSGLDPKEVLTTEDLQRLEGCLPTAQELRTVMAFSGPAAALGSAETFFRALR--DTPRPASKVSAVLFSRQFLGSVAGDAESRVETLRMACEEAMESDRLAAVLEKVLDIGNLLNEGTYQ 1276
BLAST of mRNA_P-wetherbeei_contig9960.1.1 vs. uniprot
Match: A0A6G1CJE2_9ORYZ (Formin-like protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1CJE2_9ORYZ) HSP 1 Score: 68.6 bits (166), Expect = 1.380e-10 Identity = 46/143 (32.17%), Postives = 81/143 (56.64%), Query Frame = 1 Query: 25 LMSVAQADNIAIVLRALRRVGPEQLGLALA-DWNSFPADELQLLHRCLPTDAELKVAAAFSGAVEELSPAERFLCAVAFGGVVAPERRLAALLLAEQFDGQLARIKAGLVTVMAAASQARGSARLRVILGRVLAIGNRLNAGT 450 L+ + +A+N I+L ++ P+ + ALA D + AD+L+ L + PT E+++ +SG E L E+F + V + R+ A + QF Q+ ++ L+TV +A + RGS +L+VI+ ++L +GN+LN GT Sbjct: 58 LIDIRRANNTEIMLTKIKMPLPDMMSAALALDDSVLDADQLENLIKFCPTKEEMELLKNYSGDKETLGKCEQFFLELMKVPRVESKFRIFAFKI--QFQSQIRDVRKNLLTVSSACEELRGSEKLKVIMEKILFLGNKLNQGT 198
BLAST of mRNA_P-wetherbeei_contig9960.1.1 vs. uniprot
Match: B8AR82_ORYSI (Formin-like protein n=1 Tax=Oryza sativa subsp. indica TaxID=39946 RepID=B8AR82_ORYSI) HSP 1 Score: 66.6 bits (161), Expect = 7.820e-10 Identity = 45/143 (31.47%), Postives = 81/143 (56.64%), Query Frame = 1 Query: 25 LMSVAQADNIAIVLRALRRVGPEQLGLALA-DWNSFPADELQLLHRCLPTDAELKVAAAFSGAVEELSPAERFLCAVAFGGVVAPERRLAALLLAEQFDGQLARIKAGLVTVMAAASQARGSARLRVILGRVLAIGNRLNAGT 450 L+ + +A+N I+L ++ P+ + ALA D + AD+L+ L + PT E+++ ++G E L E+F + V + R+ A + QF Q+ ++ L+TV +A + RGS +L+VI+ ++L +GN+LN GT Sbjct: 438 LIDLRRANNTEIMLTKIKMPLPDMMSAALALDDSVLDADQLENLIKFCPTKEEMELLKNYTGDKETLGKCEQFFLELMKVPRVESKFRIFAFKI--QFQSQIRDVRKNLLTVSSACEELRGSEKLKVIMEKILFLGNKLNQGT 578
BLAST of mRNA_P-wetherbeei_contig9960.1.1 vs. uniprot
Match: FH12_ORYSJ (Formin-like protein 12 n=4 Tax=Oryza TaxID=4527 RepID=FH12_ORYSJ) HSP 1 Score: 66.6 bits (161), Expect = 8.400e-10 Identity = 45/143 (31.47%), Postives = 81/143 (56.64%), Query Frame = 1 Query: 25 LMSVAQADNIAIVLRALRRVGPEQLGLALA-DWNSFPADELQLLHRCLPTDAELKVAAAFSGAVEELSPAERFLCAVAFGGVVAPERRLAALLLAEQFDGQLARIKAGLVTVMAAASQARGSARLRVILGRVLAIGNRLNAGT 450 L+ + +A+N I+L ++ P+ + ALA D + AD+L+ L + PT E+++ ++G E L E+F + V + R+ A + QF Q+ ++ L+TV +A + RGS +L+VI+ ++L +GN+LN GT Sbjct: 1326 LIDLRRANNTEIMLTKIKMPLPDMMSAALALDDSVLDADQLENLIKFCPTKEEMELLKNYTGDKETLGKCEQFFLELMKVPRVESKFRIFAFKI--QFQSQIRDVRKNLLTVSSACEELRGSEKLKVIMEKILFLGNKLNQGT 1466
BLAST of mRNA_P-wetherbeei_contig9960.1.1 vs. uniprot
Match: A0A0E0GY40_ORYNI (Formin-like protein n=5 Tax=Oryza TaxID=4527 RepID=A0A0E0GY40_ORYNI) HSP 1 Score: 66.6 bits (161), Expect = 8.430e-10 Identity = 45/143 (31.47%), Postives = 81/143 (56.64%), Query Frame = 1 Query: 25 LMSVAQADNIAIVLRALRRVGPEQLGLALA-DWNSFPADELQLLHRCLPTDAELKVAAAFSGAVEELSPAERFLCAVAFGGVVAPERRLAALLLAEQFDGQLARIKAGLVTVMAAASQARGSARLRVILGRVLAIGNRLNAGT 450 L+ + +A+N I+L ++ P+ + ALA D + AD+L+ L + PT E+++ ++G E L E+F + V + R+ A + QF Q+ ++ L+TV +A + RGS +L+VI+ ++L +GN+LN GT Sbjct: 1488 LIDLRRANNTEIMLTKIKMPLPDMMSAALALDDSVLDADQLENLIKFCPTKEEMELLKNYTGDKETLGKCEQFFLELMKVPRVESKFRIFAFKI--QFQSQIRDVRKNLLTVSSACEELRGSEKLKVIMEKILFLGNKLNQGT 1628
BLAST of mRNA_P-wetherbeei_contig9960.1.1 vs. uniprot
Match: A0A8J5WKQ0_ZIZPA (FH2 domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WKQ0_ZIZPA) HSP 1 Score: 63.5 bits (153), Expect = 8.260e-9 Identity = 44/143 (30.77%), Postives = 77/143 (53.85%), Query Frame = 1 Query: 25 LMSVAQADNIAIVLRALRRVGPEQLGLALA-DWNSFPADELQLLHRCLPTDAELKVAAAFSGAVEELSPAERFLCAVAFGGVVAPERRLAALLLAEQFDGQLARIKAGLVTVMAAASQARGSARLRVILGRVLAIGNRLNAGT 450 L+ + +A+N I+L ++ P+ + ALA D + AD+++ L + PT E+ + +SG E L E+F + V E + + QF Q+ ++ L+TV +A + RGS +L+VI+ ++L +GN LN GT Sbjct: 118 LIDMRRANNTEIMLTKIKMPLPDMMSAALALDDSVLDADQVENLIKFCPTKEEMDLLKNYSGDKETLGKCEQFFLELM--KVPRIESKFSIFSFKIQFQSQIRDVRKNLLTVSSACEELRGSEKLKVIMQKILFLGNTLNQGT 258
BLAST of mRNA_P-wetherbeei_contig9960.1.1 vs. uniprot
Match: M4F7M6_BRARP (Formin-like protein n=9 Tax=Brassica TaxID=3705 RepID=M4F7M6_BRARP) HSP 1 Score: 60.1 bits (144), Expect = 1.460e-7 Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 1 Query: 40 QADNIAIVLRALRRVGPEQLGLALADWNSFPADELQLLHRCLPTDAELKVAAAFSGAVEELSPAERFLCAVAFGGVVAPERRLAALLLAEQFDGQLARIKAGLVTVMAAASQARGSARLRVILGRVLAIGNRLNAGTHK 456 +A N++I+LRAL V E++ A+ + N P + LQ L + PT E +SG V L PAERFL + + +R+ +LL +++ IK L T+ A + R S +L VL GNR+N GT + Sbjct: 428 KAQNLSILLRALN-VTTEEVVEAIKEGNELPVELLQTLLKMAPTTEEELKLRLYSGDVNLLGPAERFLKILV--DIPFAFKRIESLLFMISLQEEVSGIKESLSTLEVACKKLRNSRLFLKLLEAVLKTGNRMNVGTFR 563
BLAST of mRNA_P-wetherbeei_contig9960.1.1 vs. uniprot
Match: A0A6J0NB15_RAPSA (Formin-like protein n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0NB15_RAPSA) HSP 1 Score: 59.7 bits (143), Expect = 1.990e-7 Identity = 47/139 (33.81%), Postives = 71/139 (51.08%), Query Frame = 1 Query: 40 QADNIAIVLRALRRVGPEQLGLALADWNSFPADELQLLHRCLPTDAELKVAAAFSGAVEELSPAERFLCAVAFGGVVAPERRLAALLLAEQFDGQLARIKAGLVTVMAAASQARGSARLRVILGRVLAIGNRLNAGTHK 456 +A N++I+LRAL V E++ A+ + N P + LQ L + PT E +SG V L PAERFL + + +R+ +LL +++ IK L T+ A + R S +L VL GNR+N GT + Sbjct: 445 KAQNLSILLRALN-VTTEEVVDAIKEGNELPVELLQTLLKMAPTTEEELKLRLYSGDVNLLGPAERFLKILV--DIPFAFKRIESLLFMISLQEEVSGIKESLSTLEVACKKLRNSRLFLKLLEAVLKTGNRMNVGTFR 580
BLAST of mRNA_P-wetherbeei_contig9960.1.1 vs. uniprot
Match: J3LW79_ORYBR (Formin-like protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3LW79_ORYBR) HSP 1 Score: 59.7 bits (143), Expect = 2.100e-7 Identity = 45/153 (29.41%), Postives = 81/153 (52.94%), Query Frame = 1 Query: 25 LMSVAQADNIAIVLRALRRVGPEQLGLALA-DWNSFPADELQLLHRCLPTDAELKVAAA----------FSGAVEELSPAERFLCAVAFGGVVAPERRLAALLLAEQFDGQLARIKAGLVTVMAAASQARGSARLRVILGRVLAIGNRLNAGT 450 L+ + +A+N I+L ++ P+ + ALA D + AD+L+ L + PT E+++ + +SG E L E+F + V + R+ A + QF Q+ ++ L+ V +A + RGS +L+VI+ ++L +GN+LN GT Sbjct: 1029 LIDIRRANNTEIMLTKIKMPLPDMMSAALALDDSVLDADQLENLIKFCPTKEEMELLKSNYVTRFFYQNYSGDKETLGKCEQFFLELMKVPRVESKFRIFAFKI--QFQSQIRDVRKNLLAVSSACEELRGSEKLKVIMEKILFLGNKLNQGT 1179
BLAST of mRNA_P-wetherbeei_contig9960.1.1 vs. uniprot
Match: A0A6D2HMQ9_9BRAS (Formin-like protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2HMQ9_9BRAS) HSP 1 Score: 58.9 bits (141), Expect = 3.700e-7 Identity = 45/144 (31.25%), Postives = 73/144 (50.69%), Query Frame = 1 Query: 25 LMSVAQADNIAIVLRALRRVGPEQLGLALADWNSFPADELQLLHRCLPTDAELKVAAAFSGAVEELSPAERFLCAVAFGGVVAPERRLAALLLAEQFDGQLARIKAGLVTVMAAASQARGSARLRVILGRVLAIGNRLNAGTHK 456 ++ +A N++I+LRAL V E++ A+ + N P + LQ L + PT E +SG + L PAERFL + + +R+ +LL +++ +K L T+ A + R S +L VL GNR+N GT + Sbjct: 484 IIDTRKAQNLSILLRALN-VTTEEVVDAIKEGNELPVELLQTLLKMAPTQEEELKLRLYSGDLNLLGPAERFLKILV--DIPFAFKRIESLLFMISLQEEVSGLKEALSTLEVACKKLRNSRLFLKLLEAVLKTGNRMNVGTFR 624 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9960.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9960.1.1 >prot_P-wetherbeei_contig9960.1.1 ID=prot_P-wetherbeei_contig9960.1.1|Name=mRNA_P-wetherbeei_contig9960.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp MSVAQADNIAIVLRALRRVGPEQLGLALADWNSFPADELQLLHRCLPTDAback to top mRNA from alignment at P-wetherbeei_contig9960:133..699- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9960.1.1 ID=mRNA_P-wetherbeei_contig9960.1.1|Name=mRNA_P-wetherbeei_contig9960.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=567bp|location=Sequence derived from alignment at P-wetherbeei_contig9960:133..699- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9960:133..699- >mRNA_P-wetherbeei_contig9960.1.1 ID=mRNA_P-wetherbeei_contig9960.1.1|Name=mRNA_P-wetherbeei_contig9960.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig9960:133..699- (Phaeothamnion wetherbeei SAG_119_79)back to top |