mRNA_P-wetherbeei_contig9913.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9913.1.1 vs. uniprot
Match: A0A2D2AH38_9PHAE (Prolycopene isomerase-like1 n=1 Tax=Sargassum integerrimum TaxID=1159339 RepID=A0A2D2AH38_9PHAE) HSP 1 Score: 164 bits (415), Expect = 5.810e-46 Identity = 81/124 (65.32%), Postives = 100/124 (80.65%), Query Frame = 1 Query: 1 ESEAMKRRRAEPLWEALEKIIPDIRARTELELIGSPLTHERFVRRHRGSYGPGYKAGQEAFPGPKTPLKGLLHCGDSTLPGIGVPAVAASGMNAANTAVSVWQHLLFLREMEGKGLVKTAFDGF 372 E E +K+ RAE +W+ALEKIIPD+R RTE+EL+ +PLTHE F RR RGSYGPG++AGQ FPG TPLKGLLHCGDSTLPGIG+PAVAASGMNAA+T VW+ L L +M+ +G+V + F+ F Sbjct: 380 EYEKLKKERAECMWKALEKIIPDVRRRTEVELVATPLTHEFFNRRFRGSYGPGWRAGQAEFPGCITPLKGLLHCGDSTLPGIGLPAVAASGMNAASTLTPVWKQLGLLWDMKRRGMVDSKFNDF 503
BLAST of mRNA_P-wetherbeei_contig9913.1.1 vs. uniprot
Match: A0A835Z9G8_9STRA (Amine oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G8_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.360e-45 Identity = 80/121 (66.12%), Postives = 95/121 (78.51%), Query Frame = 1 Query: 1 ESEAMKRRRAEPLWEALEKIIPDIRARTELELIGSPLTHERFVRRHRGSYGPGYKAGQEAFPGPKTPLKGLLHCGDSTLPGIGVPAVAASGMNAANTAVSVWQHLLFLREMEGKGLVKTAF 363 E E +K +R + LW ALE+IIPDIRAR E+ L SPLTHE F RRHRGSYGPG++AG+ FPG TP+K LL CGDSTLPG+GVPAVAASGM+AANT V VWQHL F++EM+ KG + F Sbjct: 412 EYEELKEQRTQVLWNALERIIPDIRARAEVTLPASPLTHEMFNRRHRGSYGPGWRAGEGTFPGCTTPIKDLLRCGDSTLPGLGVPAVAASGMHAANTLVPVWQHLKFVKEMQSKGFIVDRF 532
BLAST of mRNA_P-wetherbeei_contig9913.1.1 vs. uniprot
Match: A0A2D2AH28_9PHAE (Prolycopene isomerase-like1 n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A2D2AH28_9PHAE) HSP 1 Score: 159 bits (402), Expect = 4.590e-44 Identity = 75/124 (60.48%), Postives = 101/124 (81.45%), Query Frame = 1 Query: 1 ESEAMKRRRAEPLWEALEKIIPDIRARTELELIGSPLTHERFVRRHRGSYGPGYKAGQEAFPGPKTPLKGLLHCGDSTLPGIGVPAVAASGMNAANTAVSVWQHLLFLREMEGKGLVKTAFDGF 372 E EA+K+ RAE +W+ALE+IIPD+R RTE+EL+ +PLTHE F RR +GSYGPG++AG+ FPG TPLK LLHCGDSTLPG+G+PAVAASGM+AA+T VW+ L L +M+ +G++++ F+ F Sbjct: 380 EYEALKKERAEGMWKALERIIPDVRKRTEVELVATPLTHEFFNRRFKGSYGPGWRAGEAEFPGCVTPLKSLLHCGDSTLPGLGLPAVAASGMSAASTITPVWKQLGLLWDMQRRGMIESKFNDF 503
BLAST of mRNA_P-wetherbeei_contig9913.1.1 vs. uniprot
Match: A0A6P0TLA6_9CYAN (Carotene isomerase (Fragment) n=1 Tax=Cyanothece sp. SIO2G6 TaxID=2607797 RepID=A0A6P0TLA6_9CYAN) HSP 1 Score: 140 bits (354), Expect = 1.000e-40 Identity = 64/111 (57.66%), Postives = 88/111 (79.28%), Query Frame = 1 Query: 7 EAMKRRRAEPLWEALEKIIPDIRARTELELIGSPLTHERFVRRHRGSYGPGYKAGQEAFPGPKTPLKGLLHCGDSTLPGIGVPAVAASGMNAANTAVSVWQHLLFLREMEG 339 E++K++RAE +W+ALE+IIPD+R+R + L+G+PLTHERF+RRH+G+YGP ++AG++ FPGP TPL G CGDST PGIG+PAVA SGM ANT + +HL +R + G Sbjct: 21 ESLKKQRAEVMWQALERIIPDVRSRCWVNLVGTPLTHERFLRRHQGTYGPAFRAGKQLFPGPNTPLPGFWCCGDSTFPGIGLPAVATSGMIVANTIAPINKHLDLIRSLSG 131
BLAST of mRNA_P-wetherbeei_contig9913.1.1 vs. uniprot
Match: D8U6T4_VOLCA (FAD_binding_2 domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U6T4_VOLCA) HSP 1 Score: 150 bits (380), Expect = 1.240e-40 Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 1 Query: 10 AMKRRRAEPLWEALEKIIPDIRARTELELIGSPLTHERFVRRHRGSYGPGYKA-GQEAFPGPKTPLKGLLHCGDSTLPGIGVPAVAASGMNAANTAVSVWQHLLFLREM 333 A+K RA+PLWEALE+ IPDIR+RTEL L+GSPLTHERF+RRHRGSYGPG A G +++PGPKTP+ GL CGDS +PGIGVPA AASGM AAN+ VW HL + E+ Sbjct: 428 ALKEERAQPLWEALERFIPDIRSRTELTLVGSPLTHERFLRRHRGSYGPGISASGGQSWPGPKTPIPGLSVCGDSCMPGIGVPAAAASGMIAANSLAPVWSHLNMMDEL 536
BLAST of mRNA_P-wetherbeei_contig9913.1.1 vs. uniprot
Match: A0A8J4LSU1_9CHLO (Amino_oxidase domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4LSU1_9CHLO) HSP 1 Score: 151 bits (382), Expect = 1.360e-40 Identity = 74/106 (69.81%), Postives = 86/106 (81.13%), Query Frame = 1 Query: 10 AMKRRRAEPLWEALEKIIPDIRARTELELIGSPLTHERFVRRHRGSYGPGYKA-GQEAFPGPKTPLKGLLHCGDSTLPGIGVPAVAASGMNAANTAVSVWQHLLFL 324 A+K RA+PLWEALE++IPDIR R EL L+GSPLTHERFVRRHRGSYGPG A G+E++PGPKTP+ GL CGDS +PGIGVPA AASGM AAN+ VW HL + Sbjct: 491 ALKEERAQPLWEALERVIPDIRRRAELTLVGSPLTHERFVRRHRGSYGPGISASGKESWPGPKTPIPGLSVCGDSCMPGIGVPAAAASGMIAANSLAPVWSHLAMM 596
BLAST of mRNA_P-wetherbeei_contig9913.1.1 vs. uniprot
Match: A0A832M237_9CYAN (Carotene isomerase n=1 Tax=Oscillatoriales cyanobacterium SpSt-402 TaxID=2282168 RepID=A0A832M237_9CYAN) HSP 1 Score: 146 bits (369), Expect = 2.190e-40 Identity = 69/107 (64.49%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 13 MKRRRAEPLWEALEKIIPDIRARTELELIGSPLTHERFVRRHRGSYGPGYKAGQEAFPGPKTPLKGLLHCGDSTLPGIGVPAVAASGMNAANTAVSVWQHLLFLREM 333 +K+ RA +W+ALE++IPD+R+R E+ L+G+PLTHERF+RRHRGSYGP +AG+ FPG KTPL GLL CGDST PGIG+PAVAASGM AANT V QHL L+++ Sbjct: 246 LKQERAAVMWQALERVIPDVRSRCEITLVGTPLTHERFLRRHRGSYGPALRAGESLFPGAKTPLPGLLLCGDSTFPGIGLPAVAASGMIAANTLAPVSQHLAMLKDL 352
BLAST of mRNA_P-wetherbeei_contig9913.1.1 vs. uniprot
Match: A0A150GIP4_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GIP4_GONPE) HSP 1 Score: 148 bits (374), Expect = 6.080e-40 Identity = 74/112 (66.07%), Postives = 86/112 (76.79%), Query Frame = 1 Query: 1 ESEAMKRRRAEPLWEALEKIIPDIRARTELELIGSPLTHERFVRRHRGSYGPGYKA-GQEAFPGPKTPLKGLLHCGDSTLPGIGVPAVAASGMNAANTAVSVWQHLLFLREM 333 E A K RA+PLW ALE+ IPDIR RTEL+L+GSPLTHERFVRRHRGSYGPG A G + +PGP+TP+ GL CGDS +PGIGVPA AASGM AAN+ VW HL + E+ Sbjct: 388 EYRAFKEERAQPLWRALERFIPDIRERTELKLVGSPLTHERFVRRHRGSYGPGISAAGGQGWPGPRTPVPGLSVCGDSCMPGIGVPAAAASGMIAANSLAPVWSHLAMMGEL 499
BLAST of mRNA_P-wetherbeei_contig9913.1.1 vs. uniprot
Match: L8LSJ1_9CHRO (Phytoene dehydrogenase-like oxidoreductase n=1 Tax=Gloeocapsa sp. PCC 73106 TaxID=102232 RepID=L8LSJ1_9CHRO) HSP 1 Score: 148 bits (373), Expect = 8.260e-40 Identity = 72/107 (67.29%), Postives = 89/107 (83.18%), Query Frame = 1 Query: 13 MKRRRAEPLWEALEKIIPDIRARTELELIGSPLTHERFVRRHRGSYGPGYKAGQEAFPGPKTPLKGLLHCGDSTLPGIGVPAVAASGMNAANTAVSVWQHLLFLREM 333 +K+ R+E +W+ALEKIIPDIRAR E+ LIG+PLTH RF+RR+RGSYGP KAG+E+FPGP TP+ GLL CGDST PGIG+PAVAASGM AAN+ V +HL LR++ Sbjct: 402 LKQERSEVMWQALEKIIPDIRARCEVTLIGTPLTHARFLRRYRGSYGPSLKAGKESFPGPYTPVSGLLCCGDSTFPGIGIPAVAASGMIAANSLAPVTKHLALLRDI 508
BLAST of mRNA_P-wetherbeei_contig9913.1.1 vs. uniprot
Match: A0A2K3DFE7_CHLRE (Uncharacterized protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DFE7_CHLRE) HSP 1 Score: 149 bits (375), Expect = 1.650e-39 Identity = 75/106 (70.75%), Postives = 85/106 (80.19%), Query Frame = 1 Query: 1 ESEAMKRRRAEPLWEALEKIIPDIRARTELELIGSPLTHERFVRRHRGSYGPGYKA-GQEAFPGPKTPLKGLLHCGDSTLPGIGVPAVAASGMNAANTAVSVWQHL 315 E +A+K RAEPLWEALE+ IPDIR RTEL+L+GSPLTH+RFVRRHRGSYGPG A G +PGPKTP+ GL CGDS +PGIGVPA AASGM AAN+ VW HL Sbjct: 513 EYKALKEERAEPLWEALERFIPDIRDRTELKLVGSPLTHQRFVRRHRGSYGPGISAAGGAGWPGPKTPVPGLTVCGDSCMPGIGVPAAAASGMIAANSLAPVWAHL 618 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9913.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9913.1.1 >prot_P-wetherbeei_contig9913.1.1 ID=prot_P-wetherbeei_contig9913.1.1|Name=mRNA_P-wetherbeei_contig9913.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp MKRRRAEPLWEALEKIIPDIRARTELELIGSPLTHERFVRRHRGSYGPGYback to top mRNA from alignment at P-wetherbeei_contig9913:2..376+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9913.1.1 ID=mRNA_P-wetherbeei_contig9913.1.1|Name=mRNA_P-wetherbeei_contig9913.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=375bp|location=Sequence derived from alignment at P-wetherbeei_contig9913:2..376+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9913:2..376+ >mRNA_P-wetherbeei_contig9913.1.1 ID=mRNA_P-wetherbeei_contig9913.1.1|Name=mRNA_P-wetherbeei_contig9913.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig9913:2..376+ (Phaeothamnion wetherbeei SAG_119_79)back to top |