mRNA_P-wetherbeei_contig9888.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: D7G6M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M4_ECTSI) HSP 1 Score: 351 bits (900), Expect = 7.270e-114 Identity = 178/278 (64.03%), Postives = 207/278 (74.46%), Query Frame = 1 Query: 31 DASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTRDPPVVPNLQALPPDWTGQPVSVPMEPSPNLPRAVTRHPLDGKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTLL 864 DA +IE +AE+L+A GM VD R TARIPIV+F D SGL+CDISV+NPLA+RNT L++AYS DPRV LAYV+K WAKRR VNNASEGTLSSYGYLLCLLHFLQTR+PPVVPNLQALPPDW G+P + P LP +T+ P DG + +TYFY+P PGR E + +LR F RNT S G+LLAGFFRY+A E D R VS+R GG D+E KAEA CW +HTRLS+EDPFET YDVAHVLKWSR +HVR+EFARAY LL Sbjct: 363 DAGALIESIAEKLKAAGMTKVDSRPTARIPIVIFNDGASGLDCDISVMNPLAVRNTRLMKAYSVADPRVKELAYVLKRWAKRRWVNNASEGTLSSYGYLLCLLHFLQTRNPPVVPNLQALPPDWAGEP----LHGVPRLPVVMTKQPTDGLDCDTYFYDPLT-------PGRDGE----RRAAVLREFGSRNTASSGELLAGFFRYFALELDCRTSVVSVRLGGLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALL 625
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: A0A835YMU6_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMU6_9STRA) HSP 1 Score: 323 bits (828), Expect = 2.590e-97 Identity = 177/331 (53.47%), Postives = 198/331 (59.82%), Query Frame = 1 Query: 22 PSSDASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTRDPPVVPNLQALPPDWTGQPVSVPMEPSPNLPRAVTRHPLDGKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSRRNTESVGQ---------------------------------LLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWS-----------------RHRHVRLEFARAYTLL 864 P+ AS VIE VA L A GM +VDCR TARIPIVLF DP GLECDISV+NPLA+RNT LLR Y+ DPRV LA+VVKHWAK+R +N SEGTLSSYGYLL LLH+LQTR+PPVVPNLQALPPDW G P + P P LP T H DG+ NTYF+ P Q +D LR F+ NTES Q LAGFFRYYAWE D R VS+R+GG + K KAEAD W HTRLS+EDPFETWYDVAHVLKWS RH+ + EFARAYTLL Sbjct: 1477 PAEPASAVIEAVAAALSAQGMEDVDCRPTARIPIVLFKDPAYGLECDISVMNPLAVRNTDLLRTYALADPRVRPLAFVVKHWAKQRQINCPSEGTLSSYGYLLLLLHYLQTRNPPVVPNLQALPPDWPGPPAAAPTRPGRGLPERSTAHASDGRLCNTYFFVPP------------------QGSDCLRRFAALNTESYAQSYAQFGNELSLKEVFVEPSMXXXXXXXXXXXXXXLAGFFRYYAWELDMRTRVVSLRSGGTLPKAGKAEADAWGTHTRLSIEDPFETWYDVAHVLKWSSNLXXXXXXXXXXXXXXRHKLLHTEFARAYTLL 1789
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: K8YXG6_NANGC (Nucleotidyltransferase-like protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YXG6_NANGC) HSP 1 Score: 298 bits (764), Expect = 4.050e-96 Identity = 158/296 (53.38%), Postives = 193/296 (65.20%), Query Frame = 1 Query: 16 PGPSSDASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTRDP------------PVVPNLQALPPDWTGQPVS--VPMEPSPNLPRAVTRHPLDGKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTL 861 P P+ + +IE +A L A GM +V R TARIPIVLF +P +GL+CDISV NPLALRNT LL YS VDPRV ALAY+VKHWA+ R +NNAS GTLSSY Y+L +LHFLQT P+VPNLQ LPPDW G + M+ LPR + HPL+G + +TYFY P N Q N LLR ++ RN SVG+LL FF YY+WEFDYR +S+R GGA+ KE KAE D W +++RL++EDPFETWY+V H LK +HRH+R EFARAY L Sbjct: 71 PLPAGSSGEMIEALASLLEANGMEDVVARPTARIPIVLFREPGTGLDCDISVENPLALRNTQLLHEYSQVDPRVRALAYIVKHWARARKINNASGGTLSSYAYILMVLHFLQTAAAAVPSTPDTPCYAPLVPNLQLLPPDWKGNEMDRREQMQGQRQLPRQLVTHPLEGMDVDTYFYTEP--------PSEEQGQPNGQRN-LLREYAARNKASVGELLVAFFWYYSWEFDYRDLVLSVRLGGAMKKERKAEEDGWAVNSRLAIEDPFETWYNVTHFLKEGKHRHIRQEFARAYAL 357
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: W7TXG0_9STRA (PAP/25A-associated n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXG0_9STRA) HSP 1 Score: 298 bits (763), Expect = 3.620e-91 Identity = 158/299 (52.84%), Postives = 193/299 (64.55%), Query Frame = 1 Query: 16 PGPSSDASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTRDP------------PVVPNLQALPPDWTGQPVS--VPMEPSPNLPRAVTRHPLDGKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSN---DLLRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTL 861 P P+ + +IE +A L A GM +V R TARIPIVLF +P +GL+CDISV NPLALRNT LL YS VDPRV ALAY+VKHWA+ R +NNAS GTLSSY Y+L +LHFLQT P+VPNLQ LPPDW G + M+ LPR + HPL+G + +TYFY P E Q N LLR ++ RN SVG+LL FF YY+WEFDYR +S+R GGA+ KE KAE D W +++RL++EDPFETWY+V H LK +HRH+R EFARAY L Sbjct: 538 PLPAGSSGEMIEALASLLEANGMEDVVARPTARIPIVLFREPGTGLDCDISVENPLALRNTQLLHEYSRVDPRVRALAYIVKHWARARKINNASGGTLSSYAYILMVLHFLQTAAAAVPSTPDTPCYAPLVPNLQLLPPDWKGNEMDRREQMQGQRQLPRQLVTHPLEGMDVDTYFYT------------EPPSEEQGQPNGQRSLLREYAARNKASVGELLVAFFWYYSWEFDYRDLVLSVRLGGAMKKERKAEEDGWAVNSRLAIEDPFETWYNVTHFLKEGKHRHIRQEFARAYAL 824
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: A0A4D9DCB2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCB2_9STRA) HSP 1 Score: 295 bits (755), Expect = 6.140e-88 Identity = 157/296 (53.04%), Postives = 195/296 (65.88%), Query Frame = 1 Query: 16 PGPSSDASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTR---------DP---PVVPNLQALPPDWTGQPVS--VPMEPSPNLPRAVTRHPLDGKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTL 861 P P+ + +IE +A L A GM +V R TARIPIVLF +P +GL+CDISV NPLALRNT LL YS VDPRV ALAY+VKHWA+ R +NNAS GTLSSY Y+L +LHFLQT +P P+VPNLQ LPPDW G + M+ +LPR + HPL+G + +TYFY P N Q + LLR ++ RN VG+LL FF YY+WEFDYR +S+R GGA+ KE KAE D W +++RL++EDPFETWY+V H LK +HRH+R EFARAY L Sbjct: 967 PLPAGRSGEMIEALASLLEANGMEDVVARPTARIPIVLFREPGTGLDCDISVENPLALRNTQLLHEYSRVDPRVRALAYIVKHWARARKINNASGGTLSSYAYILMVLHFLQTAAAAVSSTPDNPCYAPLVPNLQLLPPDWKGNEMDRREQMQGQRHLPRQLVTHPLEGMDVDTYFYT--------EAPSEEQGQPNGQRS-LLREYAARNKACVGELLVAFFWYYSWEFDYRDLVLSVRMGGAMKKERKAEEDGWAVNSRLAIEDPFETWYNVTHFLKEGKHRHIRQEFARAYAL 1253
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: A0A6V1RBI5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RBI5_HETAK) HSP 1 Score: 274 bits (701), Expect = 1.030e-87 Identity = 159/288 (55.21%), Postives = 189/288 (65.62%), Query Frame = 1 Query: 13 VPGPSSDASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTRD-PPVVPNLQALPPDWTGQPVSVPMEPSPNLPRAVTRHPLDGKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIRA---GGAVDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTLL 864 VP P+ AS V+E AE LRA GM +V CR TARIPIV F DP SGL+ D+S+ N LAL NTALL AYS VD RV ALA+V+KHWA+RR +N A+EGTLSSYGYLL L+ FLQ R PV+PNLQALPP W P+ LP T DG+ NTYFY P PG + L AF+RRNTE+VGQLL F+ + A D R+ VS+R GG + KE KAEADCW +RLS+EDPFETWYDVAHVLK ++ ++VR EF RAYTL+ Sbjct: 46 VPLPADPAS-VVERTAEALRAEGMTDVACRPTARIPIVSFTDPQSGLQGDVSLQNALALANTALLHAYSRVDARVRALAHVIKHWARRRRMNCAAEGTLSSYGYLLLLIQFLQQRPGAPVLPNLQALPPGWEQG------GPARPLPTVETPQLADGRPANTYFYTP---------PG-------GDYSALSAAFARRNTETVGQLLLAFWHHVAHRLDTRKSVVSVRTSSPGGTLPKEYKAEADCWGQPSRLSIEDPFETWYDVAHVLKTTKDQYVRGEFHRAYTLI 310
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: A0A7S2CLX1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CLX1_9STRA) HSP 1 Score: 253 bits (647), Expect = 2.730e-77 Identity = 137/284 (48.24%), Postives = 182/284 (64.08%), Query Frame = 1 Query: 22 PSSDASTVIELVAERLRAVG-MRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTRDPPVVPNLQALPPDWTGQPVSVPMEPSPNLPRAVTRHPLD-GKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIHT-RLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTLL 864 P D + + VA L + V+ R+TARIPIV+F D SGL+CDIS+ NPLA+RNT LL AY+ +DPRV ALA+ VKHWA+RR +N+ S+GTLSSYGYLLC++HFLQTR PPV+PNLQ PP+ +++ P+ + HP++ G +TYFY+ D PG ++ R F +RNTE+ G+LL GFFRY+ EFD R+AVS+R G V K KAE D W ++T RL +EDP E WYDV H ++ H +R EF RA+T+L Sbjct: 242 PPMDPEALCQSVAGALENISDTEEVEARSTARIPIVMFQDTVSGLDCDISIFNPLAVRNTNLLAAYARIDPRVKALAFTVKHWARRRHINSPSQGTLSSYGYLLCVIHFLQTRSPPVIPNLQR-PPESI---IALQQRGDRKQPQVLVPHPVEQGVICDTYFYD-------DEAPG------DEVMMPTARWFMQRNTETDGELLVGFFRYFVTEFDSARNAVSVRHAGPVSKALKAETDFWPLYTWRLGIEDPLEPWYDVGHFMRQRNHDRLRREFLRAHTIL 508
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: A0A7S1BDU3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BDU3_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.210e-73 Identity = 130/277 (46.93%), Postives = 172/277 (62.09%), Query Frame = 1 Query: 31 DASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTRDPPVVPNLQALPPDWTGQPVSVPMEPSPNLPRAVTRHPLDGKEY-NTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYT 858 D + +AE L GM + R TARIPI+LF D ++ +ECDIS+ NPL++ NT LL Y+ +D RV L Y+VK WAK R +N+ SEGTLSSYGY+L ++HFLQ R P+VPNLQ + PD G+ V E +P +HP + + NTYFY P+ K+ L L + +N+ES G LLA FF YYA EFDYR+H VS+ ++K+ KAE DCW + L++EDPFET+YDVAHV+K S+ H+R EFA AYT Sbjct: 209 DPPVAMGRLAEDLEEAGMLKLSARLTARIPIILFEDCETKMECDISMENPLSVLNTELLSTYANIDKRVRELGYIVKKWAKARNLNSPSEGTLSSYGYILMIIHFLQRRSRPIVPNLQRMKPD--GKLVQSKEE----IPVMSFQHPTERDFHVNTYFYKPKDKISLKSLQN----------------MANKNSESTGVLLANFFYYYAIEFDYRQHVVSVNVDATLEKDLKAEIDCWSMRNNLAIEDPFETFYDVAHVVKPSKFHHLREEFAMAYT 463
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: A0A7S1C3P2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3P2_9STRA) HSP 1 Score: 233 bits (593), Expect = 1.710e-69 Identity = 138/288 (47.92%), Postives = 171/288 (59.38%), Query Frame = 1 Query: 31 DASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTRDPPVVPNLQALPPDWTGQPVSVPMEPSPNLPRAVTRHPLDGKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIR----AGGA------VDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTLL 864 D ++ A L A GM V+ R T+RIPI++F+DP +GL CD+ NPLALRNTALLRAY+ D RV LAYV+KHWA RR +NN S TLSSYGYLL LLH L R PVVP L ALPPDW G P V P LP + + + YNTYFY+P+ + QS + RN ES+G+LL FF YA+EFD RRH VS+R GGA V KE K + + W L++EDPFE YDVAHVL+ + ++ ++ E ARAY LL Sbjct: 188 DPVEIVSQAAAMLEAGGMSEVNARTTSRIPILMFVDPVTGLSCDLCASNPLALRNTALLRAYAQADARVRPLAYVLKHWASRRQINNPSGATLSSYGYLLLLLHHLMRRSTPVVPCLAALPPDWNG-PEFVFDTPESALPSIPVPN-AEKRLYNTYFYDPK-------------DFRKIQS------VAARNRESLGRLLLTFFWLYAFEFDSRRHVVSVRPRSVGGGAGPSVPSVLKEDKVDENKWNPRPLLAIEDPFEHDYDVAHVLRHTTNKAIKAEMARAYALL 454
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: A0A7S4A5C0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A5C0_9STRA) HSP 1 Score: 238 bits (607), Expect = 2.300e-68 Identity = 133/278 (47.84%), Postives = 173/278 (62.23%), Query Frame = 1 Query: 43 VIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQT-RDPPVVPNLQALPPDWTGQPVSVPMEPSPNLPRAVTRHPLDG-KEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDL--LRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTLL 864 V V E L + G +NV R TAR+PIVLF DP +GL+CD+S NPLALRNT LLRAY+ +D RV +AYV+K WAK R +N+ S+GTLSSYGY+LC+L FLQT +PP++P+LQ L DW P P P V HP D ++ F++P D++ L LR + RN +S+G+LLA FFR+YAW+ DYR V+ R + K KAE DCW + L++EDPFET YDVAHVLK+ +H+ VR EF RA L+ Sbjct: 694 VCRRVGEALESAGAKNVQVRDTARVPIVLFADPQTGLDCDVSTHNPLALRNTELLRAYAKIDGRVRGMAYVIKKWAKIRGINSPSDGTLSSYGYILCVLAFLQTVPNPPILPSLQRLDLDWPN-----PKNPDRPPPERVP-HPFDASRDVCLSFHDP------------------DKTGSLADLREIAGRNRQSLGELLALFFRHYAWDVDYRNLVVAPRTACVLPKANKAELDCWPQNPHLAIEDPFETHYDVAHVLKYPKHQLVRKEFMRASKLI 947 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9888.1.3 >prot_P-wetherbeei_contig9888.1.3 ID=prot_P-wetherbeei_contig9888.1.3|Name=mRNA_P-wetherbeei_contig9888.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=288bp MAPTVPGPSSDASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGback to top mRNA from alignment at P-wetherbeei_contig9888:614..2237- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9888.1.3 ID=mRNA_P-wetherbeei_contig9888.1.3|Name=mRNA_P-wetherbeei_contig9888.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1624bp|location=Sequence derived from alignment at P-wetherbeei_contig9888:614..2237- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9888:614..2237- >mRNA_P-wetherbeei_contig9888.1.3 ID=mRNA_P-wetherbeei_contig9888.1.3|Name=mRNA_P-wetherbeei_contig9888.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=864bp|location=Sequence derived from alignment at P-wetherbeei_contig9888:614..2237- (Phaeothamnion wetherbeei SAG_119_79)back to top |