mRNA_P-wetherbeei_contig9888.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9888.1.3
Unique NamemRNA_P-wetherbeei_contig9888.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: D7G6M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M4_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 7.270e-114
Identity = 178/278 (64.03%), Postives = 207/278 (74.46%), Query Frame = 1
Query:   31 DASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTRDPPVVPNLQALPPDWTGQPVSVPMEPSPNLPRAVTRHPLDGKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTLL 864
            DA  +IE +AE+L+A GM  VD R TARIPIV+F D  SGL+CDISV+NPLA+RNT L++AYS  DPRV  LAYV+K WAKRR VNNASEGTLSSYGYLLCLLHFLQTR+PPVVPNLQALPPDW G+P    +   P LP  +T+ P DG + +TYFY+P         PGR  E    +   +LR F  RNT S G+LLAGFFRY+A E D R   VS+R GG  D+E KAEA CW +HTRLS+EDPFET YDVAHVLKWSR +HVR+EFARAY LL
Sbjct:  363 DAGALIESIAEKLKAAGMTKVDSRPTARIPIVIFNDGASGLDCDISVMNPLAVRNTRLMKAYSVADPRVKELAYVLKRWAKRRWVNNASEGTLSSYGYLLCLLHFLQTRNPPVVPNLQALPPDWAGEP----LHGVPRLPVVMTKQPTDGLDCDTYFYDPLT-------PGRDGE----RRAAVLREFGSRNTASSGELLAGFFRYFALELDCRTSVVSVRLGGLADRERKAEACCWSMHTRLSLEDPFETSYDVAHVLKWSRFKHVRMEFARAYALL 625          
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: A0A835YMU6_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMU6_9STRA)

HSP 1 Score: 323 bits (828), Expect = 2.590e-97
Identity = 177/331 (53.47%), Postives = 198/331 (59.82%), Query Frame = 1
Query:   22 PSSDASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTRDPPVVPNLQALPPDWTGQPVSVPMEPSPNLPRAVTRHPLDGKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSRRNTESVGQ---------------------------------LLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWS-----------------RHRHVRLEFARAYTLL 864
            P+  AS VIE VA  L A GM +VDCR TARIPIVLF DP  GLECDISV+NPLA+RNT LLR Y+  DPRV  LA+VVKHWAK+R +N  SEGTLSSYGYLL LLH+LQTR+PPVVPNLQALPPDW G P + P  P   LP   T H  DG+  NTYF+ P                   Q +D LR F+  NTES  Q                                  LAGFFRYYAWE D R   VS+R+GG + K  KAEAD W  HTRLS+EDPFETWYDVAHVLKWS                 RH+ +  EFARAYTLL
Sbjct: 1477 PAEPASAVIEAVAAALSAQGMEDVDCRPTARIPIVLFKDPAYGLECDISVMNPLAVRNTDLLRTYALADPRVRPLAFVVKHWAKQRQINCPSEGTLSSYGYLLLLLHYLQTRNPPVVPNLQALPPDWPGPPAAAPTRPGRGLPERSTAHASDGRLCNTYFFVPP------------------QGSDCLRRFAALNTESYAQSYAQFGNELSLKEVFVEPSMXXXXXXXXXXXXXXLAGFFRYYAWELDMRTRVVSLRSGGTLPKAGKAEADAWGTHTRLSIEDPFETWYDVAHVLKWSSNLXXXXXXXXXXXXXXRHKLLHTEFARAYTLL 1789          
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: K8YXG6_NANGC (Nucleotidyltransferase-like protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YXG6_NANGC)

HSP 1 Score: 298 bits (764), Expect = 4.050e-96
Identity = 158/296 (53.38%), Postives = 193/296 (65.20%), Query Frame = 1
Query:   16 PGPSSDASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTRDP------------PVVPNLQALPPDWTGQPVS--VPMEPSPNLPRAVTRHPLDGKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTL 861
            P P+  +  +IE +A  L A GM +V  R TARIPIVLF +P +GL+CDISV NPLALRNT LL  YS VDPRV ALAY+VKHWA+ R +NNAS GTLSSY Y+L +LHFLQT               P+VPNLQ LPPDW G  +     M+    LPR +  HPL+G + +TYFY           P       N Q N LLR ++ RN  SVG+LL  FF YY+WEFDYR   +S+R GGA+ KE KAE D W +++RL++EDPFETWY+V H LK  +HRH+R EFARAY L
Sbjct:   71 PLPAGSSGEMIEALASLLEANGMEDVVARPTARIPIVLFREPGTGLDCDISVENPLALRNTQLLHEYSQVDPRVRALAYIVKHWARARKINNASGGTLSSYAYILMVLHFLQTAAAAVPSTPDTPCYAPLVPNLQLLPPDWKGNEMDRREQMQGQRQLPRQLVTHPLEGMDVDTYFYTEP--------PSEEQGQPNGQRN-LLREYAARNKASVGELLVAFFWYYSWEFDYRDLVLSVRLGGAMKKERKAEEDGWAVNSRLAIEDPFETWYNVTHFLKEGKHRHIRQEFARAYAL 357          
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: W7TXG0_9STRA (PAP/25A-associated n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXG0_9STRA)

HSP 1 Score: 298 bits (763), Expect = 3.620e-91
Identity = 158/299 (52.84%), Postives = 193/299 (64.55%), Query Frame = 1
Query:   16 PGPSSDASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTRDP------------PVVPNLQALPPDWTGQPVS--VPMEPSPNLPRAVTRHPLDGKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSN---DLLRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTL 861
            P P+  +  +IE +A  L A GM +V  R TARIPIVLF +P +GL+CDISV NPLALRNT LL  YS VDPRV ALAY+VKHWA+ R +NNAS GTLSSY Y+L +LHFLQT               P+VPNLQ LPPDW G  +     M+    LPR +  HPL+G + +TYFY              P   E  Q N    LLR ++ RN  SVG+LL  FF YY+WEFDYR   +S+R GGA+ KE KAE D W +++RL++EDPFETWY+V H LK  +HRH+R EFARAY L
Sbjct:  538 PLPAGSSGEMIEALASLLEANGMEDVVARPTARIPIVLFREPGTGLDCDISVENPLALRNTQLLHEYSRVDPRVRALAYIVKHWARARKINNASGGTLSSYAYILMVLHFLQTAAAAVPSTPDTPCYAPLVPNLQLLPPDWKGNEMDRREQMQGQRQLPRQLVTHPLEGMDVDTYFYT------------EPPSEEQGQPNGQRSLLREYAARNKASVGELLVAFFWYYSWEFDYRDLVLSVRLGGAMKKERKAEEDGWAVNSRLAIEDPFETWYNVTHFLKEGKHRHIRQEFARAYAL 824          
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: A0A4D9DCB2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCB2_9STRA)

HSP 1 Score: 295 bits (755), Expect = 6.140e-88
Identity = 157/296 (53.04%), Postives = 195/296 (65.88%), Query Frame = 1
Query:   16 PGPSSDASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTR---------DP---PVVPNLQALPPDWTGQPVS--VPMEPSPNLPRAVTRHPLDGKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTL 861
            P P+  +  +IE +A  L A GM +V  R TARIPIVLF +P +GL+CDISV NPLALRNT LL  YS VDPRV ALAY+VKHWA+ R +NNAS GTLSSY Y+L +LHFLQT          +P   P+VPNLQ LPPDW G  +     M+   +LPR +  HPL+G + +TYFY           P       N Q + LLR ++ RN   VG+LL  FF YY+WEFDYR   +S+R GGA+ KE KAE D W +++RL++EDPFETWY+V H LK  +HRH+R EFARAY L
Sbjct:  967 PLPAGRSGEMIEALASLLEANGMEDVVARPTARIPIVLFREPGTGLDCDISVENPLALRNTQLLHEYSRVDPRVRALAYIVKHWARARKINNASGGTLSSYAYILMVLHFLQTAAAAVSSTPDNPCYAPLVPNLQLLPPDWKGNEMDRREQMQGQRHLPRQLVTHPLEGMDVDTYFYT--------EAPSEEQGQPNGQRS-LLREYAARNKACVGELLVAFFWYYSWEFDYRDLVLSVRMGGAMKKERKAEEDGWAVNSRLAIEDPFETWYNVTHFLKEGKHRHIRQEFARAYAL 1253          
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: A0A6V1RBI5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RBI5_HETAK)

HSP 1 Score: 274 bits (701), Expect = 1.030e-87
Identity = 159/288 (55.21%), Postives = 189/288 (65.62%), Query Frame = 1
Query:   13 VPGPSSDASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTRD-PPVVPNLQALPPDWTGQPVSVPMEPSPNLPRAVTRHPLDGKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIRA---GGAVDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTLL 864
            VP P+  AS V+E  AE LRA GM +V CR TARIPIV F DP SGL+ D+S+ N LAL NTALL AYS VD RV ALA+V+KHWA+RR +N A+EGTLSSYGYLL L+ FLQ R   PV+PNLQALPP W          P+  LP   T    DG+  NTYFY P         PG          + L  AF+RRNTE+VGQLL  F+ + A   D R+  VS+R    GG + KE KAEADCW   +RLS+EDPFETWYDVAHVLK ++ ++VR EF RAYTL+
Sbjct:   46 VPLPADPAS-VVERTAEALRAEGMTDVACRPTARIPIVSFTDPQSGLQGDVSLQNALALANTALLHAYSRVDARVRALAHVIKHWARRRRMNCAAEGTLSSYGYLLLLIQFLQQRPGAPVLPNLQALPPGWEQG------GPARPLPTVETPQLADGRPANTYFYTP---------PG-------GDYSALSAAFARRNTETVGQLLLAFWHHVAHRLDTRKSVVSVRTSSPGGTLPKEYKAEADCWGQPSRLSIEDPFETWYDVAHVLKTTKDQYVRGEFHRAYTLI 310          
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: A0A7S2CLX1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CLX1_9STRA)

HSP 1 Score: 253 bits (647), Expect = 2.730e-77
Identity = 137/284 (48.24%), Postives = 182/284 (64.08%), Query Frame = 1
Query:   22 PSSDASTVIELVAERLRAVG-MRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTRDPPVVPNLQALPPDWTGQPVSVPMEPSPNLPRAVTRHPLD-GKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIHT-RLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTLL 864
            P  D   + + VA  L  +     V+ R+TARIPIV+F D  SGL+CDIS+ NPLA+RNT LL AY+ +DPRV ALA+ VKHWA+RR +N+ S+GTLSSYGYLLC++HFLQTR PPV+PNLQ  PP+     +++        P+ +  HP++ G   +TYFY+       D  PG      ++      R F +RNTE+ G+LL GFFRY+  EFD  R+AVS+R  G V K  KAE D W ++T RL +EDP E WYDV H ++   H  +R EF RA+T+L
Sbjct:  242 PPMDPEALCQSVAGALENISDTEEVEARSTARIPIVMFQDTVSGLDCDISIFNPLAVRNTNLLAAYARIDPRVKALAFTVKHWARRRHINSPSQGTLSSYGYLLCVIHFLQTRSPPVIPNLQR-PPESI---IALQQRGDRKQPQVLVPHPVEQGVICDTYFYD-------DEAPG------DEVMMPTARWFMQRNTETDGELLVGFFRYFVTEFDSARNAVSVRHAGPVSKALKAETDFWPLYTWRLGIEDPLEPWYDVGHFMRQRNHDRLRREFLRAHTIL 508          
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: A0A7S1BDU3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BDU3_9STRA)

HSP 1 Score: 243 bits (620), Expect = 1.210e-73
Identity = 130/277 (46.93%), Postives = 172/277 (62.09%), Query Frame = 1
Query:   31 DASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTRDPPVVPNLQALPPDWTGQPVSVPMEPSPNLPRAVTRHPLDGKEY-NTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYT 858
            D    +  +AE L   GM  +  R TARIPI+LF D ++ +ECDIS+ NPL++ NT LL  Y+ +D RV  L Y+VK WAK R +N+ SEGTLSSYGY+L ++HFLQ R  P+VPNLQ + PD  G+ V    E    +P    +HP +   + NTYFY P+ K+ L  L                   + +N+ES G LLA FF YYA EFDYR+H VS+     ++K+ KAE DCW +   L++EDPFET+YDVAHV+K S+  H+R EFA AYT
Sbjct:  209 DPPVAMGRLAEDLEEAGMLKLSARLTARIPIILFEDCETKMECDISMENPLSVLNTELLSTYANIDKRVRELGYIVKKWAKARNLNSPSEGTLSSYGYILMIIHFLQRRSRPIVPNLQRMKPD--GKLVQSKEE----IPVMSFQHPTERDFHVNTYFYKPKDKISLKSLQN----------------MANKNSESTGVLLANFFYYYAIEFDYRQHVVSVNVDATLEKDLKAEIDCWSMRNNLAIEDPFETFYDVAHVVKPSKFHHLREEFAMAYT 463          
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: A0A7S1C3P2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3P2_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.710e-69
Identity = 138/288 (47.92%), Postives = 171/288 (59.38%), Query Frame = 1
Query:   31 DASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQTRDPPVVPNLQALPPDWTGQPVSVPMEPSPNLPRAVTRHPLDGKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIR----AGGA------VDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTLL 864
            D   ++   A  L A GM  V+ R T+RIPI++F+DP +GL CD+   NPLALRNTALLRAY+  D RV  LAYV+KHWA RR +NN S  TLSSYGYLL LLH L  R  PVVP L ALPPDW G P  V   P   LP     +  + + YNTYFY+P+             +    QS       + RN ES+G+LL  FF  YA+EFD RRH VS+R     GGA      V KE K + + W     L++EDPFE  YDVAHVL+ + ++ ++ E ARAY LL
Sbjct:  188 DPVEIVSQAAAMLEAGGMSEVNARTTSRIPILMFVDPVTGLSCDLCASNPLALRNTALLRAYAQADARVRPLAYVLKHWASRRQINNPSGATLSSYGYLLLLLHHLMRRSTPVVPCLAALPPDWNG-PEFVFDTPESALPSIPVPN-AEKRLYNTYFYDPK-------------DFRKIQS------VAARNRESLGRLLLTFFWLYAFEFDSRRHVVSVRPRSVGGGAGPSVPSVLKEDKVDENKWNPRPLLAIEDPFEHDYDVAHVLRHTTNKAIKAEMARAYALL 454          
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Match: A0A7S4A5C0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A5C0_9STRA)

HSP 1 Score: 238 bits (607), Expect = 2.300e-68
Identity = 133/278 (47.84%), Postives = 173/278 (62.23%), Query Frame = 1
Query:   43 VIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSGLECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASEGTLSSYGYLLCLLHFLQT-RDPPVVPNLQALPPDWTGQPVSVPMEPSPNLPRAVTRHPLDG-KEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDL--LRAFSRRNTESVGQLLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIHTRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTLL 864
            V   V E L + G +NV  R TAR+PIVLF DP +GL+CD+S  NPLALRNT LLRAY+ +D RV  +AYV+K WAK R +N+ S+GTLSSYGY+LC+L FLQT  +PP++P+LQ L  DW       P  P    P  V  HP D  ++    F++P                  D++  L  LR  + RN +S+G+LLA FFR+YAW+ DYR   V+ R    + K  KAE DCW  +  L++EDPFET YDVAHVLK+ +H+ VR EF RA  L+
Sbjct:  694 VCRRVGEALESAGAKNVQVRDTARVPIVLFADPQTGLDCDVSTHNPLALRNTELLRAYAKIDGRVRGMAYVIKKWAKIRGINSPSDGTLSSYGYILCVLAFLQTVPNPPILPSLQRLDLDWPN-----PKNPDRPPPERVP-HPFDASRDVCLSFHDP------------------DKTGSLADLREIAGRNRQSLGELLALFFRHYAWDVDYRNLVVAPRTACVLPKANKAELDCWPQNPHLAIEDPFETHYDVAHVLKYPKHQLVRKEFMRASKLI 947          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9888.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6M4_ECTSI7.270e-11464.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YMU6_9STRA2.590e-9753.47WW domain-containing protein n=1 Tax=Tribonema min... [more]
K8YXG6_NANGC4.050e-9653.38Nucleotidyltransferase-like protein n=1 Tax=Nannoc... [more]
W7TXG0_9STRA3.620e-9152.84PAP/25A-associated n=1 Tax=Nannochloropsis gaditan... [more]
A0A4D9DCB2_9STRA6.140e-8853.04Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A6V1RBI5_HETAK1.030e-8755.21Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2CLX1_9STRA2.730e-7748.24Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S1BDU3_9STRA1.210e-7346.93Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S1C3P2_9STRA1.710e-6947.92Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S4A5C0_9STRA2.300e-6847.84Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9888contigP-wetherbeei_contig9888:614..2237 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G6M4
PFAMsNTP_transf_2,PAP_assoc
Model size864
Max annot lvl2759|Eukaryota
KEGG koko:K13291
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016070,GO:0016071,GO:0016073,GO:0016074,GO:0016180,GO:0016740,GO:0016772,GO:0016779,GO:0019219,GO:0019222,GO:0031123,GO:0031124,GO:0031126,GO:0031323,GO:0031325,GO:0034470,GO:0034641,GO:0034660,GO:0043144,GO:0043170,GO:0043628,GO:0043629,GO:0043631,GO:0044237,GO:0044238,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050265,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060147,GO:0060148,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0065007,GO:0070569,GO:0070920,GO:0071050,GO:0071076,GO:0071704,GO:0080090,GO:0090065,GO:0090304,GO:0097159,GO:0140098,GO:1900368,GO:1900370,GO:1901360,GO:1901363,GO:1903705
Exons4
Evalue1.19e-114
EggNOG OGsCOG5260@1|root,KOG2277@2759|Eukaryota
EC2.7.7.52
DescriptionRNA uridylyltransferase activity
Cds size864
COG categoryL
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187114.725582-CDS-P-wetherbeei_contig9888:613..7331683187114.725582-CDS-P-wetherbeei_contig9888:613..733Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9888 614..733 -
1683187114.7381418-CDS-P-wetherbeei_contig9888:1012..12431683187114.7381418-CDS-P-wetherbeei_contig9888:1012..1243Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9888 1013..1243 -
1683187114.7527714-CDS-P-wetherbeei_contig9888:1455..15841683187114.7527714-CDS-P-wetherbeei_contig9888:1455..1584Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9888 1456..1584 -
1683187114.763755-CDS-P-wetherbeei_contig9888:1853..22371683187114.763755-CDS-P-wetherbeei_contig9888:1853..2237Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9888 1854..2237 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9888.1.3prot_P-wetherbeei_contig9888.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9888 614..2237 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9888.1.3

>prot_P-wetherbeei_contig9888.1.3 ID=prot_P-wetherbeei_contig9888.1.3|Name=mRNA_P-wetherbeei_contig9888.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=288bp
MAPTVPGPSSDASTVIELVAERLRAVGMRNVDCRATARIPIVLFIDPDSG
LECDISVLNPLALRNTALLRAYSTVDPRVPALAYVVKHWAKRRMVNNASE
GTLSSYGYLLCLLHFLQTRDPPVVPNLQALPPDWTGQPVSVPMEPSPNLP
RAVTRHPLDGKEYNTYFYNPQCKLLLDRLPGRPSEIENDQSNDLLRAFSR
RNTESVGQLLAGFFRYYAWEFDYRRHAVSIRAGGAVDKEAKAEADCWQIH
TRLSVEDPFETWYDVAHVLKWSRHRHVRLEFARAYTLL
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mRNA from alignment at P-wetherbeei_contig9888:614..2237-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9888.1.3 ID=mRNA_P-wetherbeei_contig9888.1.3|Name=mRNA_P-wetherbeei_contig9888.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1624bp|location=Sequence derived from alignment at P-wetherbeei_contig9888:614..2237- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCCCGACGGTGCCGGGCCCTTCCAGCGATGCCAGCACCGTCATCGA GCTGGTGGCCGAGCGGCTGCGCGCTGTCGGCATGCGCAACGTCGACTGCC GCGCTACCGCCCGTATCCCCATCGTCCTGTTCATCGACCCGGACTCGGGG CTCGAGTGCGACATCTCGGTGCTCAATCCGCTCGCGCTGCGCAATACGGC GCTGCTGCGGGCTTACAGCACGGTGGATCCCCGCGTGCCGGCGCTGGCGT ACGTGGTGAAGCACTGGGCAAAGCGGCGGATGGTGAACAACGCCAGCGAG GGCACGTTGAGCAGCTACGGTTACCTGCTGTGCCTGCTGCACTTCCTGCA GACGCGCGACCCGCCCGTCGTGCCCAACCTGCAGGTTTGGGGGGGAGGGG GACGAGGAAACGCCGAGGAAATCTTTGTTTGAGGCACAGGCACCGCTGCC GGCTTGTTTTGTTTCTATGTTCTGTGAAGAACTGGTAAGAGGGTTGCAGT TCGTTTCAGGTCAGGGCGGGCTAGAGTCCTCCCACCTTCCAGCGTCAACC AAGCCCCACATTTATCTGATAATTTTATGTGCTCTGCTTTCTTCTGGTTG TCCTGCCACTGCAACCTCTCTGTGACCTATTGCTTCCATCGGGAACATCA CAGGCGCTCCCGCCGGACTGGACGGGGCAGCCGGTTTCGGTGCCGATGGA GCCGTCGCCAAACCTCCCGCGGGCCGTCACGAGACACCCGCTGGACGGGA AGGAGTACAACACGTACTTTTACAACCCGCAGGTAAGACTAGCACCTCAG AAGAAGATAGGACCCCGTGGGGAACTGTTGACAATTTCCTAGGAGTGAAG AAGGAAAAGAAATGAAAAAGGAGTTAGTTGTTTACATTGGAGCACTTGCG AACCAGGAGATGAGAATCAGTGCCTGTACGTATTCGGCGTGCTTTAAGAC TTTGCATTTTCGGCCGCGCATCTCCTCATCTCAGTCCAAAAAAGTGCAAA TTGCTCCTTGACCGCTTGCCGGGCCGACCTTCCGAAATTGAAAATGACCA GTCGAATGACTTGCTGCGAGCATTTTCGCGGCGCAACACGGAGAGCGTGG GGCAGCTGCTGGCGGGCTTCTTCCGCTACTATGCGTGGGAGTTCGACTAC CGCCGCCACGCCGTCAGCATCCGGGCGGGCGGCGCCGTCGACAAAGAGGC CAAGGCCGAGGCCGACTGCTGGCAGGTGCGTTCCGTTTTCATTTTGTCGT CTATCGCCGTCGGCCGCCGCCGCAGCTGCTGGTTTAAACGCGCAAGAAAC AAGGCAACAGTGGCGTTGCGTGAGCATGTACCGGCGGGTTTCTGATAGAG TGAGCTAATGCTCGGACTGGCTGCTCGATGCACAACATTGACCACGCTGC TCTAACGGCCTTCTTTTCTCGTTTCTTCTGTCCCTCCGCCCCCATCACCT CTTCCACCGCCTGCGGCGGCTTTCGGCTGCCGTACCGGTCGAAGCTGCTT GCAGATCCACACACGGCTGTCCGTGGAGGACCCGTTCGAGACGTGGTACG ACGTGGCGCACGTCCTCAAGTGGAGCCGCCACCGCCACGTCCGCCTCGAA TTCGCCCGCGCCTACACGTTGCTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9888:614..2237-

>mRNA_P-wetherbeei_contig9888.1.3 ID=mRNA_P-wetherbeei_contig9888.1.3|Name=mRNA_P-wetherbeei_contig9888.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=864bp|location=Sequence derived from alignment at P-wetherbeei_contig9888:614..2237- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCCCGACGGTGCCGGGCCCTTCCAGCGATGCCAGCACCGTCATCGA
GCTGGTGGCCGAGCGGCTGCGCGCTGTCGGCATGCGCAACGTCGACTGCC
GCGCTACCGCCCGTATCCCCATCGTCCTGTTCATCGACCCGGACTCGGGG
CTCGAGTGCGACATCTCGGTGCTCAATCCGCTCGCGCTGCGCAATACGGC
GCTGCTGCGGGCTTACAGCACGGTGGATCCCCGCGTGCCGGCGCTGGCGT
ACGTGGTGAAGCACTGGGCAAAGCGGCGGATGGTGAACAACGCCAGCGAG
GGCACGTTGAGCAGCTACGGTTACCTGCTGTGCCTGCTGCACTTCCTGCA
GACGCGCGACCCGCCCGTCGTGCCCAACCTGCAGGCGCTCCCGCCGGACT
GGACGGGGCAGCCGGTTTCGGTGCCGATGGAGCCGTCGCCAAACCTCCCG
CGGGCCGTCACGAGACACCCGCTGGACGGGAAGGAGTACAACACGTACTT
TTACAACCCGCAGTGCAAATTGCTCCTTGACCGCTTGCCGGGCCGACCTT
CCGAAATTGAAAATGACCAGTCGAATGACTTGCTGCGAGCATTTTCGCGG
CGCAACACGGAGAGCGTGGGGCAGCTGCTGGCGGGCTTCTTCCGCTACTA
TGCGTGGGAGTTCGACTACCGCCGCCACGCCGTCAGCATCCGGGCGGGCG
GCGCCGTCGACAAAGAGGCCAAGGCCGAGGCCGACTGCTGGCAGATCCAC
ACACGGCTGTCCGTGGAGGACCCGTTCGAGACGTGGTACGACGTGGCGCA
CGTCCTCAAGTGGAGCCGCCACCGCCACGTCCGCCTCGAATTCGCCCGCG
CCTACACGTTGCTC
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