mRNA_P-wetherbeei_contig9653.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: A0A3C0TS56_9PROT (PfkB domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TS56_9PROT) HSP 1 Score: 306 bits (784), Expect = 1.020e-100 Identity = 157/294 (53.40%), Postives = 191/294 (64.97%), Query Frame = 1 Query: 10 GVTLIGPISRDIVRLPDLPERQQPGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREVLRMVEK 891 GVTLIGP+S+DIVR+P R QPGGAV+YAGMALR G+PV IITRLAK D L LR AGA + S TT FIN Y R Q V +A P + D+P L T+WVY GPLL+GDIS LI HIA + HRIALD QG +RR + G V+ WP K LP IDILKAD EA L+TGQ++ E AR L G+G++H ++T G +GA++CHRG +G+AWP DTTGCGDTFLA YL G++ G+ P AGR AA AAALK FGPL A +V + + Sbjct: 8 GVTLIGPVSQDIVRVPGREARAQPGGAVYYAGMALRGFGLPVEIITRLAKADREHLTRELRAAGAIVNVSPSAQTTGFINEYSEDKARRAQTVDGRAAPIRMDDLPPLRTRWVYLGPLLQGDISADLISHIAAQRRHRIALDVQGFVRRASGGKVLAADWPGKTSFLPCIDILKADDAEAALLTGQTDREAAARHLSGQGIEHVVITSGGSGALICHRGVFHHVSIRLASGEAWPISDTTGCGDTFLAVYLAGVMSGEPPFAAGRLAAAAAALKARDFGPLRAGWEDVRELASR 301
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: A0A3B9BJ04_9PROT (PfkB domain-containing protein n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9BJ04_9PROT) HSP 1 Score: 232 bits (591), Expect = 5.240e-71 Identity = 136/293 (46.42%), Postives = 178/293 (60.75%), Query Frame = 1 Query: 13 VTLIGPISRDIVRLPDLPERQQPGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPG-TDERKQEVSAQADPF---TLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIAL-DAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREVL 876 + LIG ++RDI+R+P +R+QPGG+V+YAGMAL LG V I+TR+A +DEA LL LR+AGA + L S T F+N+ GPG D+R QE+ A+ADPF L + L+ VYFG LL GD+ ALI IA+ I L DAQG LR D +VMP WPD ++L DI+KAD +E+ +TG A L GV L+T G GA+L G R A+RP VDTTGCGDTFLAAYL ++ G+ P A ++AA AA +K T FGPL +++ Sbjct: 48 ILLIGHVTRDIIRVPGRRDREQPGGSVYYAGMALCGLGHQVTILTRIASRDEALLLADLRRAGARVENLPSARTACFVNAQGPGGIDDRVQEMRAEADPFGAALLQAVQGLSCDAVYFGSLLAGDLDAALILRIAECFPRAIKLFDAQGPLRVRHDTHVMPCVWPDAGQVLSVCDIVKADQEESLRLTGARTAAAAAARLADLGVAQVLITRGGQGALLRSGGRSRRLAAWRPRSGVCAIVDTTGCGDTFLAAYLHAVLNGRPPQAAAQFAAIAATMKLTRFGPLCCGENDIV 340
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: A0A6N9BRP1_9GAMM (Ribokinase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6N9BRP1_9GAMM) HSP 1 Score: 180 bits (457), Expect = 1.610e-51 Identity = 114/289 (39.45%), Postives = 157/289 (54.33%), Query Frame = 1 Query: 19 LIGPISRDIVRLPDLPERQQPGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSY-GPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILC---GRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREV 873 ++G ++RD +R+ D RQQPGGA +YAG ALR+LG ++T+ A D LL QAG +T S TT+F N+Y + R+Q V A ADPF D+ L + + GPL D+ + A RGA + LDAQG++R + DG + W D+ L + LK D +EA ++TG+ +PE A +L G A+V+ GA++C G + R PAF A VD TG GDTF AAYL + G AEAGR+AA AAL FGP ++V Sbjct: 9 VVGHVTRDRIRIGD-EVRQQPGGAAWYAGRALRSLGETPAVVTKTAPADRQELLDGFGQAGIEVTWRPSAATTTFENAYLDARLERRRQTVDAVADPFVAEDLAELRARMLLLGPLTAADMPVPFLHAAAARGA--VGLDAQGMVRHLADGGIAHGPWQDRDAGLAAVAFLKVDEEEATVLTGERDPERAALLLADRLGHPPREAIVSRAGRGALICADGRVHRIPAFPVAEP----VDATGLGDTFFAAYLCRRLAGDHAAEAGRFAAATAALALVRFGPFAGSEQDV 290
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: UPI001FB66CA2 (PfkB family carbohydrate kinase n=1 Tax=Segetibacter sp. 3557_3 TaxID=2547429 RepID=UPI001FB66CA2) HSP 1 Score: 175 bits (443), Expect = 9.890e-50 Identity = 105/269 (39.03%), Postives = 144/269 (53.53%), Query Frame = 1 Query: 79 PGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREVLRMV 885 PGG Y MALR L + ++T +A ++ ++ LR G + +L STHT F N YG D R Q V ADPFT+ +P+++ + GPLL D S AL +A +G I+LD QGLLR V + V W K E+L + ILKA+ E E +TG SN + A+ L G GV ++TLG G+++ + PAF P T+DTTGCGDT++A YL I G ++G Y A A LK FGP ++ MV Sbjct: 5 PGGTGLYMSMALRNLNIRYLLVTAVAPGEQY-IIDKLRTDGVEVISLPSTHTVYFENIYGENPDHRDQNVLNIADPFTVASLPDVSAGIFHLGPLLYQDFSEALFPVLASKGI--ISLDVQGLLRHVKNKKVSYTDWNSKEELLKHVTILKANEFELETLTGTSNVKEGAKYLAGLGVKEVVITLGSKGSLVYSDDLFVNIPAFPPTA----TIDTTGCGDTYMAGYLFKRINGASIEDSGIYGAAMATLKIQSFGPFTGSSADINEMV 266
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: UPI001647F071 (PfkB family carbohydrate kinase n=1 Tax=Spirosoma utsteinense TaxID=2585773 RepID=UPI001647F071) HSP 1 Score: 175 bits (443), Expect = 1.500e-49 Identity = 107/279 (38.35%), Postives = 151/279 (54.12%), Query Frame = 1 Query: 13 VTLIGPISRDIVRLPDLPERQQPGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGP 849 + IGPIS D + D R PGG +Y AL+ + +IT L D A L+ P+R AG + L S HT SF N Y + +Q V Q+ PF+L +P L T+ V+ GPLL DI AL+ +A +RI+LD QG LR V + V+ W K + LP ++ILKA+ E ++TGQ +P A L GV+ ++TLG+ G+++ G AF P VDTTGCGDT++A YL ++G +A + A A+LK + FGP Sbjct: 4 ICTIGPISNDTIINADTT-RCLPGGTAYYVANALQQFPLRQQVITVLEASDHA-LVEPMRVAGIDVHILPSHHTVSFENKYSADQSDPEQRVRHQSSPFSLEHMPALTTKLVHLGPLLSQDIPLALLETLAQ--TNRISLDIQGYLRDVRNHKVVYRDWAAKKQALPLVNILKANEMEMGVLTGQKSPREGALYLADMGVEEVVITLGKKGSLVYSNGTFHTVRAFSPTA----VVDTTGCGDTYMAGYLAQRVQGVDIPQAAEFGAAMASLKVSTFGP 274
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: A0A369T8M8_9PROT (PfkB domain-containing protein n=1 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369T8M8_9PROT) HSP 1 Score: 174 bits (440), Expect = 6.180e-49 Identity = 114/292 (39.04%), Postives = 158/292 (54.11%), Query Frame = 1 Query: 13 VTLIGPISRDIVRLPDLPERQQPGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMAD---MREVLR 879 V ++G ++RD + + D P R+QPGG+ FYA LG+ ++TR++ +D A LL PL + G + ++ TT+F N Y G R Q+ + A P D L + GPL GDI A + R +ALD QGLLRRV G + P D +L + DI+KAD EA L+TG ++P AR + +VTLG GA++ A+ + P A PTVDTTGCGD+F+AAYL + G P AGR+A A+LK T GP AD +RE+LR Sbjct: 14 VLVVGHVTRDRIVIDDAPAREQPGGSAFYAACVHARLGLATALLTRMSGRDRADLLRPLAELGVRLAVRSAQATTAFENIYRHGV--RSQKATRLAPPIQPVDFQALNATAIQLGPLTAGDIPPATVAAARAR-CRWLALDLQGLLRRVASGRIRPSRALDA-SLLRQADIVKADRHEARLVTGLADPRAAARRVALWCQGEGIVTLGRDGALV----AVGERVYDIPRVDAGPTVDTTGCGDSFVAAYLARRLRGDPPPAAGRFATAVASLKATRHGPFDADEASVRELLR 297
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: UPI001995B20F (Ribokinase n=1 Tax=Ferruginibacter sp. TaxID=1940288 RepID=UPI001995B20F) HSP 1 Score: 173 bits (438), Expect = 1.070e-48 Identity = 105/276 (38.04%), Postives = 148/276 (53.62%), Query Frame = 1 Query: 67 ERQQPGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREVLRMVEKT 894 E+ GG FY AL + V ++T LA + E + LR G T+ ALAS HT +F N+Y R Q V AD FT+ + + + GPLL DI LI+ +A+RG +I+LD QG LR+V + +V +GW DK E L +DILKAD E E++TG + A +LC GV ++T G G+++ + PA+ PA + +DTTGCGDT++A YL I G AG + A A+LK GP + VL +EK+ Sbjct: 21 EKLMAGGTSFYFSNALSNMDVNYCLVTSLA-ESEMHFVDDLRIKGLTVIALASKHTVNFENNYSKNLYHRTQRVLQTADSFTVEQLHQVEAAIFHLGPLLANDIPLMLIKDLANRG--KISLDVQGYLRKVENKSVQAIGWQDKKEALKYVDILKADEAEMEMLTGYKDVRRGAEMLCEWGVKEVVITFGSKGSLIYAQHIFYDIPAYTPAVE----IDTTGCGDTYMAGYLYQRISGASVQVAGEFGAAMASLKIESSGPFTGTKKAVLMQMEKS 289
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: A0A1M5CYK1_9BACT (Sugar or nucleoside kinase, ribokinase family n=1 Tax=Cnuella takakiae TaxID=1302690 RepID=A0A1M5CYK1_9BACT) HSP 1 Score: 169 bits (429), Expect = 2.410e-47 Identity = 102/273 (37.36%), Postives = 145/273 (53.11%), Query Frame = 1 Query: 73 QQPGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREVLRMVEK 891 + GG +Y AL + + ++T A + L+ G + L + HT F N YG D R Q+V +A PF + + + + GPL+ GDIS A I +A +G R++LD QG LR+V V+P+ W K LP I LK +E E++TG ++ E ARILC GV A+VTLG G+++C L PA+ PA T+DTTGCGDT++A YL + G EAGR+AA A LK V GP + V ++E+ Sbjct: 28 EMAGGTSWYFSHALSRMPLRYGLVTA-AGDLAGDAVHVLQNIGIAVRTLDAAHTVVFENRYGHNPDHRTQKVLQEATPFNTAQLEGINAKVFHLGPLVAGDISEAAIALLAAKG--RVSLDVQGYLRKVVGEKVVPIDWSTKQRWLPFIHYLKVSEEELEVLTGTTDVEAGARILCRWGVQEAIVTLGSKGSLVCADEVLYAIPAYAPAH----TIDTTGCGDTYMAGYLYQRVRGAAIPEAGRFAAAMATLKIEVSGPFSGEEASVRAVMEQ 293
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: A0A3E1NCP7_9BACT (Ribokinase n=2 Tax=Deminuibacter soli TaxID=2291815 RepID=A0A3E1NCP7_9BACT) HSP 1 Score: 167 bits (423), Expect = 1.940e-46 Identity = 107/292 (36.64%), Postives = 152/292 (52.05%), Query Frame = 1 Query: 13 VTLIGPISRDIVRLPDLPERQQPGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREVLRMVE 888 + +G I+ D + P E GG FY A+R + V ++T LA++ A++ T LR G + AL S HT F N Y D R Q V +ADPFT + + + GPLL D++ I++++ R R++LD QG LR V +V P+ W +K E L IDILKA+ E E++TGQ+ A IL GV ++TLG G+++ G PA+ P+ A D TGCGDT++A YL +G EAG +AA A+LK GP +VL E Sbjct: 6 ICCVGHITHDKIVTPKA-EVHMAGGTSFYFSNAIRQMDVRYLLVTALAEEQFASV-TALRAKGIEVNALPSAHTVYFENIYPENQDHRTQRVLQKADPFTPEQLTGVEANVFHLGPLLADDMTVEFIKNLSARA--RVSLDVQGFLREVCGQDVCPIDWDEKKEALQYIDILKANEDEMEVLTGQTGVRKGAAILNEWGVKEVVITLGSMGSVIYADGVFYDIPAYTPSVVA----DATGCGDTYMAGYLYQRSKGAGYQEAGEFAAAMASLKIQSSGPFTGTAEDVLAFRE 289
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: A0A660S4Q3_9BACT (Ribokinase n=1 Tax=Thermodesulfobacteria bacterium TaxID=2202153 RepID=A0A660S4Q3_9BACT) HSP 1 Score: 166 bits (421), Expect = 3.740e-46 Identity = 103/294 (35.03%), Postives = 166/294 (56.46%), Query Frame = 1 Query: 13 VTLIGPISRDIVRLPDLPERQQPGGAVFYAGMALRALGVPVNI--ITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREVLRMVE 888 + +IG I++DI+R+ + +++ PGG +Y +ALR L +NI IT+L K ++ LL L + + S TT F N Y + R Q+V A A PFT+ D+ N + + + GPL DI +I++++ + +I+LD QG +R V G + + W DK E LP I+ILKA+ +EA+++TG ++ + A L G+ ++TLG G+++ G PAF P TVD TGCGDT++AAY+ ++ AG +AA A+LK FGP + +V +++ Sbjct: 4 ICVIGHITKDIIRI-EKNKKELPGGVAYYFTLALRNLDPYLNICLITKL-KNEDRILLDELFKNNIQVFYTNSKETTIFENIYTDTLNFRIQKVRAIAQPFTIEDVSNKSAKIFHLGPLTNEDIPVEVIKYLSKKS--KISLDIQGFVRNVEQGEIKKINWKDKEEGLPCIEILKANEEEAKILTGINDIKKAAIKLAEYGIKEVVITLGRKGSLVFSNGKFFSFPAFPPK----KTVDVTGCGDTYIAAYIYKRLKSCNIENAGNFAAATASLKIESFGPFKGNKEDVFYLLK 289 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9653.3.1 >prot_P-wetherbeei_contig9653.3.1 ID=prot_P-wetherbeei_contig9653.3.1|Name=mRNA_P-wetherbeei_contig9653.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=299bp MQNGVTLIGPISRDIVRLPDLPERQQPGGAVFYAGMALRALGVPVNIITRback to top mRNA from alignment at P-wetherbeei_contig9653:1556..2452+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9653.3.1 ID=mRNA_P-wetherbeei_contig9653.3.1|Name=mRNA_P-wetherbeei_contig9653.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=897bp|location=Sequence derived from alignment at P-wetherbeei_contig9653:1556..2452+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9653:1556..2452+ >mRNA_P-wetherbeei_contig9653.3.1 ID=mRNA_P-wetherbeei_contig9653.3.1|Name=mRNA_P-wetherbeei_contig9653.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=897bp|location=Sequence derived from alignment at P-wetherbeei_contig9653:1556..2452+ (Phaeothamnion wetherbeei SAG_119_79)back to top |