mRNA_P-wetherbeei_contig9653.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9653.3.1
Unique NamemRNA_P-wetherbeei_contig9653.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: A0A3C0TS56_9PROT (PfkB domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TS56_9PROT)

HSP 1 Score: 306 bits (784), Expect = 1.020e-100
Identity = 157/294 (53.40%), Postives = 191/294 (64.97%), Query Frame = 1
Query:   10 GVTLIGPISRDIVRLPDLPERQQPGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREVLRMVEK 891
            GVTLIGP+S+DIVR+P    R QPGGAV+YAGMALR  G+PV IITRLAK D   L   LR AGA +    S  TT FIN Y      R Q V  +A P  + D+P L T+WVY GPLL+GDIS  LI HIA +  HRIALD QG +RR + G V+   WP K   LP IDILKAD  EA L+TGQ++ E  AR L G+G++H ++T G +GA++CHRG          +G+AWP  DTTGCGDTFLA YL G++ G+ P  AGR AA AAALK   FGPL A   +V  +  +
Sbjct:    8 GVTLIGPVSQDIVRVPGREARAQPGGAVYYAGMALRGFGLPVEIITRLAKADREHLTRELRAAGAIVNVSPSAQTTGFINEYSEDKARRAQTVDGRAAPIRMDDLPPLRTRWVYLGPLLQGDISADLISHIAAQRRHRIALDVQGFVRRASGGKVLAADWPGKTSFLPCIDILKADDAEAALLTGQTDREAAARHLSGQGIEHVVITSGGSGALICHRGVFHHVSIRLASGEAWPISDTTGCGDTFLAVYLAGVMSGEPPFAAGRLAAAAAALKARDFGPLRAGWEDVRELASR 301          
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: A0A3B9BJ04_9PROT (PfkB domain-containing protein n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9BJ04_9PROT)

HSP 1 Score: 232 bits (591), Expect = 5.240e-71
Identity = 136/293 (46.42%), Postives = 178/293 (60.75%), Query Frame = 1
Query:   13 VTLIGPISRDIVRLPDLPERQQPGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPG-TDERKQEVSAQADPF---TLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIAL-DAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREVL 876
            + LIG ++RDI+R+P   +R+QPGG+V+YAGMAL  LG  V I+TR+A +DEA LL  LR+AGA +  L S  T  F+N+ GPG  D+R QE+ A+ADPF    L  +  L+   VYFG LL GD+  ALI  IA+     I L DAQG LR   D +VMP  WPD  ++L   DI+KAD +E+  +TG       A  L   GV   L+T G  GA+L   G   R  A+RP       VDTTGCGDTFLAAYL  ++ G+ P  A ++AA AA +K T FGPL     +++
Sbjct:   48 ILLIGHVTRDIIRVPGRRDREQPGGSVYYAGMALCGLGHQVTILTRIASRDEALLLADLRRAGARVENLPSARTACFVNAQGPGGIDDRVQEMRAEADPFGAALLQAVQGLSCDAVYFGSLLAGDLDAALILRIAECFPRAIKLFDAQGPLRVRHDTHVMPCVWPDAGQVLSVCDIVKADQEESLRLTGARTAAAAAARLADLGVAQVLITRGGQGALLRSGGRSRRLAAWRPRSGVCAIVDTTGCGDTFLAAYLHAVLNGRPPQAAAQFAAIAATMKLTRFGPLCCGENDIV 340          
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: A0A6N9BRP1_9GAMM (Ribokinase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6N9BRP1_9GAMM)

HSP 1 Score: 180 bits (457), Expect = 1.610e-51
Identity = 114/289 (39.45%), Postives = 157/289 (54.33%), Query Frame = 1
Query:   19 LIGPISRDIVRLPDLPERQQPGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSY-GPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILC---GRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREV 873
            ++G ++RD +R+ D   RQQPGGA +YAG ALR+LG    ++T+ A  D   LL    QAG  +T   S  TT+F N+Y     + R+Q V A ADPF   D+  L  + +  GPL   D+    +   A RGA  + LDAQG++R + DG +    W D+   L  +  LK D +EA ++TG+ +PE  A +L    G     A+V+    GA++C  G + R PAF  A      VD TG GDTF AAYL   + G   AEAGR+AA  AAL    FGP     ++V
Sbjct:    9 VVGHVTRDRIRIGD-EVRQQPGGAAWYAGRALRSLGETPAVVTKTAPADRQELLDGFGQAGIEVTWRPSAATTTFENAYLDARLERRRQTVDAVADPFVAEDLAELRARMLLLGPLTAADMPVPFLHAAAARGA--VGLDAQGMVRHLADGGIAHGPWQDRDAGLAAVAFLKVDEEEATVLTGERDPERAALLLADRLGHPPREAIVSRAGRGALICADGRVHRIPAFPVAEP----VDATGLGDTFFAAYLCRRLAGDHAAEAGRFAAATAALALVRFGPFAGSEQDV 290          
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: UPI001FB66CA2 (PfkB family carbohydrate kinase n=1 Tax=Segetibacter sp. 3557_3 TaxID=2547429 RepID=UPI001FB66CA2)

HSP 1 Score: 175 bits (443), Expect = 9.890e-50
Identity = 105/269 (39.03%), Postives = 144/269 (53.53%), Query Frame = 1
Query:   79 PGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREVLRMV 885
            PGG   Y  MALR L +   ++T +A  ++  ++  LR  G  + +L STHT  F N YG   D R Q V   ADPFT+  +P+++    + GPLL  D S AL   +A +G   I+LD QGLLR V +  V    W  K E+L  + ILKA+  E E +TG SN +  A+ L G GV   ++TLG  G+++      +  PAF P      T+DTTGCGDT++A YL   I G    ++G Y A  A LK   FGP      ++  MV
Sbjct:    5 PGGTGLYMSMALRNLNIRYLLVTAVAPGEQY-IIDKLRTDGVEVISLPSTHTVYFENIYGENPDHRDQNVLNIADPFTVASLPDVSAGIFHLGPLLYQDFSEALFPVLASKGI--ISLDVQGLLRHVKNKKVSYTDWNSKEELLKHVTILKANEFELETLTGTSNVKEGAKYLAGLGVKEVVITLGSKGSLVYSDDLFVNIPAFPPTA----TIDTTGCGDTYMAGYLFKRINGASIEDSGIYGAAMATLKIQSFGPFTGSSADINEMV 266          
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: UPI001647F071 (PfkB family carbohydrate kinase n=1 Tax=Spirosoma utsteinense TaxID=2585773 RepID=UPI001647F071)

HSP 1 Score: 175 bits (443), Expect = 1.500e-49
Identity = 107/279 (38.35%), Postives = 151/279 (54.12%), Query Frame = 1
Query:   13 VTLIGPISRDIVRLPDLPERQQPGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGP 849
            +  IGPIS D +   D   R  PGG  +Y   AL+   +   +IT L   D A L+ P+R AG  +  L S HT SF N Y     + +Q V  Q+ PF+L  +P L T+ V+ GPLL  DI  AL+  +A    +RI+LD QG LR V +  V+   W  K + LP ++ILKA+  E  ++TGQ +P   A  L   GV+  ++TLG+ G+++   G      AF P       VDTTGCGDT++A YL   ++G    +A  + A  A+LK + FGP
Sbjct:    4 ICTIGPISNDTIINADTT-RCLPGGTAYYVANALQQFPLRQQVITVLEASDHA-LVEPMRVAGIDVHILPSHHTVSFENKYSADQSDPEQRVRHQSSPFSLEHMPALTTKLVHLGPLLSQDIPLALLETLAQ--TNRISLDIQGYLRDVRNHKVVYRDWAAKKQALPLVNILKANEMEMGVLTGQKSPREGALYLADMGVEEVVITLGKKGSLVYSNGTFHTVRAFSPTA----VVDTTGCGDTYMAGYLAQRVQGVDIPQAAEFGAAMASLKVSTFGP 274          
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: A0A369T8M8_9PROT (PfkB domain-containing protein n=1 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369T8M8_9PROT)

HSP 1 Score: 174 bits (440), Expect = 6.180e-49
Identity = 114/292 (39.04%), Postives = 158/292 (54.11%), Query Frame = 1
Query:   13 VTLIGPISRDIVRLPDLPERQQPGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMAD---MREVLR 879
            V ++G ++RD + + D P R+QPGG+ FYA      LG+   ++TR++ +D A LL PL + G  +   ++  TT+F N Y  G   R Q+ +  A P    D   L    +  GPL  GDI  A +     R    +ALD QGLLRRV  G + P    D   +L + DI+KAD  EA L+TG ++P   AR +        +VTLG  GA++    A+  +    P   A PTVDTTGCGD+F+AAYL   + G  P  AGR+A   A+LK T  GP  AD   +RE+LR
Sbjct:   14 VLVVGHVTRDRIVIDDAPAREQPGGSAFYAACVHARLGLATALLTRMSGRDRADLLRPLAELGVRLAVRSAQATTAFENIYRHGV--RSQKATRLAPPIQPVDFQALNATAIQLGPLTAGDIPPATVAAARAR-CRWLALDLQGLLRRVASGRIRPSRALDA-SLLRQADIVKADRHEARLVTGLADPRAAARRVALWCQGEGIVTLGRDGALV----AVGERVYDIPRVDAGPTVDTTGCGDSFVAAYLARRLRGDPPPAAGRFATAVASLKATRHGPFDADEASVRELLR 297          
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: UPI001995B20F (Ribokinase n=1 Tax=Ferruginibacter sp. TaxID=1940288 RepID=UPI001995B20F)

HSP 1 Score: 173 bits (438), Expect = 1.070e-48
Identity = 105/276 (38.04%), Postives = 148/276 (53.62%), Query Frame = 1
Query:   67 ERQQPGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREVLRMVEKT 894
            E+   GG  FY   AL  + V   ++T LA + E   +  LR  G T+ ALAS HT +F N+Y      R Q V   AD FT+  +  +     + GPLL  DI   LI+ +A+RG  +I+LD QG LR+V + +V  +GW DK E L  +DILKAD  E E++TG  +    A +LC  GV   ++T G  G+++  +      PA+ PA +    +DTTGCGDT++A YL   I G     AG + A  A+LK    GP     + VL  +EK+
Sbjct:   21 EKLMAGGTSFYFSNALSNMDVNYCLVTSLA-ESEMHFVDDLRIKGLTVIALASKHTVNFENNYSKNLYHRTQRVLQTADSFTVEQLHQVEAAIFHLGPLLANDIPLMLIKDLANRG--KISLDVQGYLRKVENKSVQAIGWQDKKEALKYVDILKADEAEMEMLTGYKDVRRGAEMLCEWGVKEVVITFGSKGSLIYAQHIFYDIPAYTPAVE----IDTTGCGDTYMAGYLYQRISGASVQVAGEFGAAMASLKIESSGPFTGTKKAVLMQMEKS 289          
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: A0A1M5CYK1_9BACT (Sugar or nucleoside kinase, ribokinase family n=1 Tax=Cnuella takakiae TaxID=1302690 RepID=A0A1M5CYK1_9BACT)

HSP 1 Score: 169 bits (429), Expect = 2.410e-47
Identity = 102/273 (37.36%), Postives = 145/273 (53.11%), Query Frame = 1
Query:   73 QQPGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREVLRMVEK 891
            +  GG  +Y   AL  + +   ++T  A       +  L+  G  +  L + HT  F N YG   D R Q+V  +A PF    +  +  +  + GPL+ GDIS A I  +A +G  R++LD QG LR+V    V+P+ W  K   LP I  LK   +E E++TG ++ E  ARILC  GV  A+VTLG  G+++C    L   PA+ PA     T+DTTGCGDT++A YL   + G    EAGR+AA  A LK  V GP   +   V  ++E+
Sbjct:   28 EMAGGTSWYFSHALSRMPLRYGLVTA-AGDLAGDAVHVLQNIGIAVRTLDAAHTVVFENRYGHNPDHRTQKVLQEATPFNTAQLEGINAKVFHLGPLVAGDISEAAIALLAAKG--RVSLDVQGYLRKVVGEKVVPIDWSTKQRWLPFIHYLKVSEEELEVLTGTTDVEAGARILCRWGVQEAIVTLGSKGSLVCADEVLYAIPAYAPAH----TIDTTGCGDTYMAGYLYQRVRGAAIPEAGRFAAAMATLKIEVSGPFSGEEASVRAVMEQ 293          
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: A0A3E1NCP7_9BACT (Ribokinase n=2 Tax=Deminuibacter soli TaxID=2291815 RepID=A0A3E1NCP7_9BACT)

HSP 1 Score: 167 bits (423), Expect = 1.940e-46
Identity = 107/292 (36.64%), Postives = 152/292 (52.05%), Query Frame = 1
Query:   13 VTLIGPISRDIVRLPDLPERQQPGGAVFYAGMALRALGVPVNIITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREVLRMVE 888
            +  +G I+ D +  P   E    GG  FY   A+R + V   ++T LA++  A++ T LR  G  + AL S HT  F N Y    D R Q V  +ADPFT   +  +     + GPLL  D++   I++++ R   R++LD QG LR V   +V P+ W +K E L  IDILKA+  E E++TGQ+     A IL   GV   ++TLG  G+++   G     PA+ P+  A    D TGCGDT++A YL    +G    EAG +AA  A+LK    GP      +VL   E
Sbjct:    6 ICCVGHITHDKIVTPKA-EVHMAGGTSFYFSNAIRQMDVRYLLVTALAEEQFASV-TALRAKGIEVNALPSAHTVYFENIYPENQDHRTQRVLQKADPFTPEQLTGVEANVFHLGPLLADDMTVEFIKNLSARA--RVSLDVQGFLREVCGQDVCPIDWDEKKEALQYIDILKANEDEMEVLTGQTGVRKGAAILNEWGVKEVVITLGSMGSVIYADGVFYDIPAYTPSVVA----DATGCGDTYMAGYLYQRSKGAGYQEAGEFAAAMASLKIQSSGPFTGTAEDVLAFRE 289          
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Match: A0A660S4Q3_9BACT (Ribokinase n=1 Tax=Thermodesulfobacteria bacterium TaxID=2202153 RepID=A0A660S4Q3_9BACT)

HSP 1 Score: 166 bits (421), Expect = 3.740e-46
Identity = 103/294 (35.03%), Postives = 166/294 (56.46%), Query Frame = 1
Query:   13 VTLIGPISRDIVRLPDLPERQQPGGAVFYAGMALRALGVPVNI--ITRLAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQADPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLLRRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILCGRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFLAAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREVLRMVE 888
            + +IG I++DI+R+ +  +++ PGG  +Y  +ALR L   +NI  IT+L K ++  LL  L +    +    S  TT F N Y    + R Q+V A A PFT+ D+ N + +  + GPL   DI   +I++++ +   +I+LD QG +R V  G +  + W DK E LP I+ILKA+ +EA+++TG ++ +  A  L   G+   ++TLG  G+++   G     PAF P      TVD TGCGDT++AAY+   ++      AG +AA  A+LK   FGP   +  +V  +++
Sbjct:    4 ICVIGHITKDIIRI-EKNKKELPGGVAYYFTLALRNLDPYLNICLITKL-KNEDRILLDELFKNNIQVFYTNSKETTIFENIYTDTLNFRIQKVRAIAQPFTIEDVSNKSAKIFHLGPLTNEDIPVEVIKYLSKKS--KISLDIQGFVRNVEQGEIKKINWKDKEEGLPCIEILKANEEEAKILTGINDIKKAAIKLAEYGIKEVVITLGRKGSLVFSNGKFFSFPAFPPK----KTVDVTGCGDTYIAAYIYKRLKSCNIENAGNFAAATASLKIESFGPFKGNKEDVFYLLK 289          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9653.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TS56_9PROT1.020e-10053.40PfkB domain-containing protein n=1 Tax=Alphaproteo... [more]
A0A3B9BJ04_9PROT5.240e-7146.42PfkB domain-containing protein n=4 Tax=Alphaproteo... [more]
A0A6N9BRP1_9GAMM1.610e-5139.45Ribokinase n=1 Tax=Gammaproteobacteria bacterium T... [more]
UPI001FB66CA29.890e-5039.03PfkB family carbohydrate kinase n=1 Tax=Segetibact... [more]
UPI001647F0711.500e-4938.35PfkB family carbohydrate kinase n=1 Tax=Spirosoma ... [more]
A0A369T8M8_9PROT6.180e-4939.04PfkB domain-containing protein n=1 Tax=Ferruginiva... [more]
UPI001995B20F1.070e-4838.04Ribokinase n=1 Tax=Ferruginibacter sp. TaxID=19402... [more]
A0A1M5CYK1_9BACT2.410e-4737.36Sugar or nucleoside kinase, ribokinase family n=1 ... [more]
A0A3E1NCP7_9BACT1.940e-4636.64Ribokinase n=2 Tax=Deminuibacter soli TaxID=229181... [more]
A0A660S4Q3_9BACT3.740e-4635.03Ribokinase n=1 Tax=Thermodesulfobacteria bacterium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9653contigP-wetherbeei_contig9653:1556..2452 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog925409.KI911562_gene67
PFAMsPfkB
Model size897
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.83e-55
EggNOG OGsCOG0524@1|root,COG0524@2|Bacteria,4NFJ9@976|Bacteroidetes,1IR3B@117747|Sphingobacteriia
DescriptionPfkB domain protein
Cds size897
COG categoryG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187104.049772-CDS-P-wetherbeei_contig9653:1555..24521683187104.049772-CDS-P-wetherbeei_contig9653:1555..2452Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9653 1556..2452 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9653.3.1prot_P-wetherbeei_contig9653.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9653 1556..2452 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9653.3.1

>prot_P-wetherbeei_contig9653.3.1 ID=prot_P-wetherbeei_contig9653.3.1|Name=mRNA_P-wetherbeei_contig9653.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=299bp
MQNGVTLIGPISRDIVRLPDLPERQQPGGAVFYAGMALRALGVPVNIITR
LAKQDEATLLTPLRQAGATITALASTHTTSFINSYGPGTDERKQEVSAQA
DPFTLGDIPNLATQWVYFGPLLEGDISTALIRHIADRGAHRIALDAQGLL
RRVTDGNVMPVGWPDKYEILPRIDILKADAQEAELITGQSNPEMTARILC
GRGVDHALVTLGEAGAILCHRGALIRQPAFRPAGKAWPTVDTTGCGDTFL
AAYLGGIIEGKQPAEAGRYAATAAALKQTVFGPLMADMREVLRMVEKT*
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mRNA from alignment at P-wetherbeei_contig9653:1556..2452+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9653.3.1 ID=mRNA_P-wetherbeei_contig9653.3.1|Name=mRNA_P-wetherbeei_contig9653.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=897bp|location=Sequence derived from alignment at P-wetherbeei_contig9653:1556..2452+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGAACGGCGTCACCCTGATCGGCCCGATCAGCCGCGACATTGTGCG CCTGCCGGACCTGCCCGAACGCCAGCAACCCGGTGGCGCCGTATTTTATG CGGGCATGGCCCTGCGCGCTCTGGGTGTGCCGGTGAACATCATCACCCGT CTGGCAAAACAGGATGAAGCAACCCTGCTGACGCCCTTGCGGCAGGCGGG CGCAACAATAACTGCGCTGGCGTCTACGCACACCACCAGCTTCATCAACA GCTATGGTCCGGGTACGGATGAACGCAAACAGGAAGTTTCAGCGCAAGCC GATCCCTTCACCCTTGGTGATATACCCAACCTTGCAACGCAATGGGTATA TTTTGGACCGCTACTGGAAGGCGATATTTCAACAGCCCTGATCCGGCATA TTGCAGATCGCGGCGCGCACCGCATTGCCCTGGATGCGCAAGGCCTGCTG CGCCGCGTCACGGACGGAAACGTGATGCCCGTCGGCTGGCCTGATAAATA TGAAATCCTGCCGCGCATCGATATTCTGAAAGCTGACGCGCAAGAAGCCG AACTGATAACTGGTCAAAGCAATCCTGAAATGACCGCGCGCATCCTGTGC GGACGCGGTGTAGATCACGCACTCGTCACGCTGGGCGAAGCAGGCGCAAT CCTGTGCCATCGCGGCGCGCTCATCCGCCAACCCGCATTCAGACCTGCGG GCAAAGCCTGGCCAACCGTGGATACCACCGGCTGCGGCGACACATTCCTG GCGGCCTATCTGGGCGGCATTATCGAGGGCAAACAGCCCGCAGAGGCCGG CCGTTACGCCGCCACCGCCGCAGCCCTGAAACAGACGGTCTTCGGGCCGC TCATGGCGGATATGCGGGAAGTCCTGCGGATGGTAGAAAAAACCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9653:1556..2452+

>mRNA_P-wetherbeei_contig9653.3.1 ID=mRNA_P-wetherbeei_contig9653.3.1|Name=mRNA_P-wetherbeei_contig9653.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=897bp|location=Sequence derived from alignment at P-wetherbeei_contig9653:1556..2452+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGAACGGCGTCACCCTGATCGGCCCGATCAGCCGCGACATTGTGCG
CCTGCCGGACCTGCCCGAACGCCAGCAACCCGGTGGCGCCGTATTTTATG
CGGGCATGGCCCTGCGCGCTCTGGGTGTGCCGGTGAACATCATCACCCGT
CTGGCAAAACAGGATGAAGCAACCCTGCTGACGCCCTTGCGGCAGGCGGG
CGCAACAATAACTGCGCTGGCGTCTACGCACACCACCAGCTTCATCAACA
GCTATGGTCCGGGTACGGATGAACGCAAACAGGAAGTTTCAGCGCAAGCC
GATCCCTTCACCCTTGGTGATATACCCAACCTTGCAACGCAATGGGTATA
TTTTGGACCGCTACTGGAAGGCGATATTTCAACAGCCCTGATCCGGCATA
TTGCAGATCGCGGCGCGCACCGCATTGCCCTGGATGCGCAAGGCCTGCTG
CGCCGCGTCACGGACGGAAACGTGATGCCCGTCGGCTGGCCTGATAAATA
TGAAATCCTGCCGCGCATCGATATTCTGAAAGCTGACGCGCAAGAAGCCG
AACTGATAACTGGTCAAAGCAATCCTGAAATGACCGCGCGCATCCTGTGC
GGACGCGGTGTAGATCACGCACTCGTCACGCTGGGCGAAGCAGGCGCAAT
CCTGTGCCATCGCGGCGCGCTCATCCGCCAACCCGCATTCAGACCTGCGG
GCAAAGCCTGGCCAACCGTGGATACCACCGGCTGCGGCGACACATTCCTG
GCGGCCTATCTGGGCGGCATTATCGAGGGCAAACAGCCCGCAGAGGCCGG
CCGTTACGCCGCCACCGCCGCAGCCCTGAAACAGACGGTCTTCGGGCCGC
TCATGGCGGATATGCGGGAAGTCCTGCGGATGGTAGAAAAAACCTAG
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