mRNA_P-wetherbeei_contig8407.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A672HUD6_SALFA (Reverse transcriptase domain-containing protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672HUD6_SALFA) HSP 1 Score: 107 bits (267), Expect = 1.900e-22 Identity = 55/134 (41.04%), Postives = 82/134 (61.19%), Query Frame = 1
Query: 13 PRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQINGRAAAP 414
P++G+ + N+RP++LL VDYK+L+K + L + I DQT VPGR + N+ L+RD+ L +S D A ++ +D EKA+D VEH FLWR +E+ G F+ +Q+LYR + L+ING AP
Sbjct: 64 PKKGNLQDIKNWRPVSLLCVDYKLLSKVLASRLGRAMEQVIHRDQTYCVPGRSMVDNVHLIRDV---LEVSSSLDIDAGLISVDQEKAFDRVEHSFLWRVMESFGFSAGFIAKIQVLYRDIESVLKINGSLCAP 194
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A060SPQ7_PYCCI (RNase H type-1 domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPQ7_PYCCI) HSP 1 Score: 110 bits (274), Expect = 5.140e-22 Identity = 57/130 (43.85%), Postives = 79/130 (60.77%), Query Frame = 1
Query: 10 WPRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQING 399
W +G+ + NYRPI +LN DYK+L K + LAL P+ + P Q GFVPGR + L R + L A+A K+ AI+ LD EKAYD + H++LWR LE G+P SFV ++ LY A ++ +NG
Sbjct: 282 WKEKGEKTKVVNYRPITVLNTDYKLLTKIMAVKLALAAPSIVHPSQAGFVPGRRLRDQTQLARMM--MLWAEA-KEENGAIVALDQEKAYDKISHDYLWRVLERFGIPASFVNIIKSLYASAETSIMVNG 408
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A060SP60_PYCCI (RNase H type-1 domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SP60_PYCCI) HSP 1 Score: 110 bits (274), Expect = 5.190e-22 Identity = 57/130 (43.85%), Postives = 79/130 (60.77%), Query Frame = 1
Query: 10 WPRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQING 399
W +G+ + NYRPI +LN DYK+L K + LAL P+ + P Q GFVPGR + L R + L A+A K+ AI+ LD EKAYD + H++LWR LE G+P SFV ++ LY A ++ +NG
Sbjct: 132 WKEKGEKTKVVNYRPITVLNTDYKLLTKIMAVQLALAAPSIVHPSQAGFVPGRRLRDQTQLARMM--MLWAEA-KEENGAIVALDQEKAYDKISHDYLWRVLERFGIPASFVNIIKSLYASAETSIMVNG 258
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A665WRW9_ECHNA (Reverse transcriptase domain-containing protein n=1 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665WRW9_ECHNA) HSP 1 Score: 104 bits (260), Expect = 5.280e-22 Identity = 56/134 (41.79%), Postives = 83/134 (61.94%), Query Frame = 1
Query: 13 PRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQINGRAAAP 414
P++GD L N+RP++LL DYK+LAKA ++ L + + DQ+ VPGR I+ N+ L+R + L S D ++ +D EKA+D VEH++LW+ L A G F+ +QLLYR ++ L+ING AAP
Sbjct: 71 PKKGDLQDLRNWRPVSLLCGDYKVLAKALARRLREVMAEVVHVDQSYCVPGRTISDNVTLIRHV---LELSGSLDMDTGLISIDQEKAFDRVEHQYLWQTLCAFGFSPGFIAGIQLLYRDVASILKINGGLAAP 201
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: E2LBP9_MONPE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Moniliophthora perniciosa (strain FA553 / isolate CP02) TaxID=554373 RepID=E2LBP9_MONPE) HSP 1 Score: 101 bits (251), Expect = 3.390e-21 Identity = 54/128 (42.19%), Postives = 75/128 (58.59%), Query Frame = 1
Query: 16 RRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQING 399
++G+ +ANYRPI+LLN DYKI KA + L+ + + PDQ GF+PGR+I +I L + + A I+ LD EKAYD +EHE+LWR L LP+ F+ V+ LY A + ING
Sbjct: 76 KKGERAEIANYRPISLLNTDYKIFTKALTIKLSKVVTELVHPDQAGFIPGRNIYDHIWLSKRVIEIAEEDAQN---GVIIALDQEKAYDRIEHEYLWRTLRTFNLPERFINTVKSLYEDAHTYVMING 200
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A060SHR8_PYCCI (Reverse transcriptase domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SHR8_PYCCI) HSP 1 Score: 107 bits (267), Expect = 3.620e-21 Identity = 56/130 (43.08%), Postives = 77/130 (59.23%), Query Frame = 1
Query: 10 WPRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQING 399
W +G+ + NYRPI +LN DYK+L K + LA P + P Q GFVPGR + L R + L A+A K+ AI+ LD EKAYD + H++LWR LE G+P+ FV V+ LY A ++ +NG
Sbjct: 314 WKEKGEKTKVVNYRPITVLNTDYKLLTKIMAVKLAAAAPNIVHPAQAGFVPGRKLRDQTQLARMM--MLWAEA-KEVNGAIVALDQEKAYDKIAHDYLWRVLERFGIPELFVTTVKCLYANAETSVMVNG 440
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A060SQU0_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SQU0_PYCCI) HSP 1 Score: 107 bits (267), Expect = 4.440e-21 Identity = 55/130 (42.31%), Postives = 78/130 (60.00%), Query Frame = 1
Query: 10 WPRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQING 399
W +G+ + NYRPI +LN DYK+L K + LA P+ + P Q GFVPGR + L R + L A+A K+ AI+ LD EKAYD + H++LWR LE G+P+ F+ V+ LY A ++ +NG
Sbjct: 510 WKEKGEKTKVVNYRPITVLNTDYKLLTKIMAVKLAAAAPSIVHPAQAGFVPGRKLRDQTQLARMM--MLWAEA-KEVNGAIVALDQEKAYDKIAHDYLWRVLERFGIPEPFITMVKSLYANAETSVMVNG 636
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A672HKG1_SALFA (Reverse transcriptase domain-containing protein n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672HKG1_SALFA) HSP 1 Score: 107 bits (266), Expect = 5.400e-21 Identity = 56/134 (41.79%), Postives = 81/134 (60.45%), Query Frame = 1
Query: 13 PRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQINGRAAAP 414
P++G+ + N+RP++LL VDYK+L+K + L + I DQT VPGR + NI L+RD+ L +S D A + +D EKA+D VEH FLWR +E+ G F+ +Q+LYR + L+ING AP
Sbjct: 517 PKKGNLQDIKNWRPVSLLCVDYKLLSKVLASRLGRAMEQVIHRDQTNCVPGRSMVDNIHLIRDV---LEVSSSLDIDAGQISVDQEKAFDRVEHSFLWRVMESFGFSAGFIAKIQVLYRDIESVLKINGSLCAP 647
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A673YTB5_SALTR (Reverse transcriptase domain-containing protein n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A673YTB5_SALTR) HSP 1 Score: 102 bits (254), Expect = 8.890e-21 Identity = 54/134 (40.30%), Postives = 80/134 (59.70%), Query Frame = 1
Query: 13 PRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQINGRAAAP 414
P++GD + N+RP+ALL DYKIL+KA S L + I DQ+ VPGR I NI L+RD L + A ++ +D EKA+D VEH++LW LEA G F++ ++++Y + L++NG +AP
Sbjct: 48 PKKGDPREVKNWRPVALLCTDYKILSKALSNRLREVMGQIIHTDQSYCVPGRQIGDNISLIRDF---LDVSRAIGLDAGLISIDQEKAFDRVEHQYLWHTLEAFGFSSGFIVMIEVIYGDIESVLKVNGGLSAP 178
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Match: A0A388M631_CHABU (Reverse transcriptase domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388M631_CHABU) HSP 1 Score: 105 bits (261), Expect = 1.420e-20 Identity = 58/128 (45.31%), Postives = 78/128 (60.94%), Query Frame = 1
Query: 16 RRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTGFVPGRDIATNIILLRDLAAQLGAQASKDFTAAILFLDFEKAYDTVEHEFLWRALEARGLPKSFVLDVQLLYRGASATLQING 399
++GD + N+RP++LL+ YK+ AK + L LP + P QTGFVP R I TN+I++R++ L D A+L LDFEKAYD V FL R +E RG+ F L VQ L A+AT+QING
Sbjct: 347 KKGDPMEIRNWRPVSLLSAPYKLYAKVLANRLTEVLPDLVHPTQTGFVPTRQILTNVIMVREV---LRRAEESDPPLAVLLLDFEKAYDRVRWGFLLRGMEKRGIGPRFRLAVQDLLGSATATVQING 471 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8407.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8407.2.1 >prot_P-wetherbeei_contig8407.2.1 ID=prot_P-wetherbeei_contig8407.2.1|Name=mRNA_P-wetherbeei_contig8407.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=162bp SSCWPRRGDSFALANYRPIALLNVDYKILAKAWSQTLALWLPAAIDPDQTback to top mRNA from alignment at P-wetherbeei_contig8407:874..2199- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8407.2.1 ID=mRNA_P-wetherbeei_contig8407.2.1|Name=mRNA_P-wetherbeei_contig8407.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1326bp|location=Sequence derived from alignment at P-wetherbeei_contig8407:874..2199- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8407:874..2199- >mRNA_P-wetherbeei_contig8407.2.1 ID=mRNA_P-wetherbeei_contig8407.2.1|Name=mRNA_P-wetherbeei_contig8407.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig8407:874..2199- (Phaeothamnion wetherbeei SAG_119_79)back to top |