mRNA_P-wetherbeei_contig8113.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE) HSP 1 Score: 116 bits (290), Expect = 1.080e-26 Identity = 83/193 (43.01%), Postives = 114/193 (59.07%), Query Frame = 1
Query: 25 FCAQLLLALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGA---EGYRSYDTAVLTLFSAMLGNFEFEVFDGV-----------QHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV 561
F AQ LA S PLL+ RLL L+Q+ LGPM+Q +I ML + F V + VVM GF +AF A+F D G+ E Y S+ TA LT+F A LG F+FE FD V + AGT LL YL V+A+++LNLLIAVL+ A+ V +N KEF +++T L ++S + +P PFN++Q+
Sbjct: 1144 FVAQFFLAASAPLLFARLLRLSQIDSTLGPMIQ-IIWRMLSQTLRFGVFIVVVMAGFALAFNAVFGSC-----DAGSDLDESYGSFGTAFLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLVVLAVVMLNLLIAVLSTAHGEVYANGEKEFHLARTRLILQSARAVAHRRIPPPFNLVQL 1330
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 7.200e-20 Identity = 73/175 (41.71%), Postives = 101/175 (57.71%), Query Frame = 1
Query: 40 LLALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGAEGYRSYDTAVLTLFSAMLGNFEF-EVFDGVQHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV 561
L ALS PL++ RLL AQ+ R GPM+Q V + M EL F VV+ VVM+GF ++F ALF ++ LTLF AMLG +F F G Q+ T L YL V+A+MLLNLLIAVL+ +++ V ++EF+VS+ + +M LLP PFN++Q+
Sbjct: 901 LYALSAPLIFSRLLFFAQMLRFHGPMIQVVFS-MTAELVKFGVVIIVVMLGFAMSFHALFGDVD------------TFGGTCLTLFKAMLGEVDFFGSFPGNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQL 1062
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: D7FMR2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR2_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 7.410e-20 Identity = 71/189 (37.57%), Postives = 103/189 (54.50%), Query Frame = 1
Query: 16 QALFCAQLLLALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGAEGYRSYDTAVLTLFSAMLGNFEFEVFDGVQHGL---------AGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNIL 555
QA F A+ LA PLL+ R+LSLAQ+ GPM Q + N ML LA F V + VVM+ F +AF +L+S D+ E YR+ ++L +F +MLG+ F+ F+ ++ AG LL Y+ + AI++LNLLIAVL+ + V N EF ++++ S E LP P N+L
Sbjct: 1449 QAFFIARFSLAAIAPLLFARVLSLAQVDNTFGPMTQIIWN-MLFHLARFSVFMLVVMVSFALAFHSLYSDPNCSEGDELFESYRTLRESLLDMFRSMLGDANFDRFEADRNLTCTGPSWEFDAGITLLTIYIVLQAILMLNLLIAVLSTVHDTVSENAITEFHLARSQFIQASAASVEGGRLPPPLNLL 1636
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 1.560e-18 Identity = 70/153 (45.75%), Postives = 92/153 (60.13%), Query Frame = 1
Query: 25 FCAQLLLALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGA---EGYRSYDTAVLTLFSAMLGNFEFEVFDGV-----------QHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAY 441
F AQ LA+S PLL+ RLL L+Q+ LGPM+Q +I ML + F V + VVM GF +AF A+F D G+ E Y S+ TA+LT+F A LG F+FE FD V + AGT LL YL V+A+++LNLLIAVL+ A+
Sbjct: 1142 FVAQFFLAVSAPLLFARLLRLSQIDNTLGPMIQ-IIWRMLSQTLRFGVFIVVVMAGFALAFNAVFGSC-----DAGSGLDESYGSFGTALLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLIVLAVVMLNLLIAVLSTAH 1288
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 1.900e-17 Identity = 70/202 (34.65%), Postives = 106/202 (52.48%), Query Frame = 1
Query: 22 LFCAQLLLALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKG----------AEGYRSYDTAVLTLFSAMLGNFEFEVF------------DGVQHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV 561
LF AQ A S PLL+ RLL L+Q+ LGPM Q VI M+ + F + VVM+ F +AF A+F G + + ++ + +T+FSA LG +FE++ DG Q AG L+ Y+ +MA++LLNLLIAVL+ A++ V N +KEF +++ L +S + P P N+++V
Sbjct: 1212 LFHAQFFYAASAPLLFSRLLVLSQIDATLGPMTQ-VIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEFEDPTCNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCKLPDGAQE--AGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNGDKEFHLARAKLIYQSARVVTRRRPPPPLNLVKV 1410
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: D7FMG5_ECTSI (Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG5_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 1.130e-16 Identity = 65/176 (36.93%), Postives = 100/176 (56.82%), Query Frame = 1
Query: 40 LLALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGAEGYRSYDTAVLTLFSAMLGNFEF--EVFDGVQHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV 561
L ALS PL++ R+L Q +R G +V Q++ ++ E+ F +VLG +MMGFTV+F ALF E +SY L +F AMLG E+++ + VLL YLTV+A+MLLNLLIAVL+ + V + F+ S+ + ++ + ++LP+PFN+ Q+
Sbjct: 586 LFALSAPLVFSRVLFFGQFLKRQG-LVIQMMTILFGEMLQFALVLGTIMMGFTVSFYALF------------EEAKSYGDVWLDVFKAMLGEVSVFSEIYEDSVYRDVARVLLVVYLTVVAVMLLNLLIAVLSTEHAKVDEQQDIAFRESKVRIMKLYVRIVDSDVLPSPFNLPQI 748
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: D7FNX2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX2_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 2.570e-14 Identity = 58/158 (36.71%), Postives = 86/158 (54.43%), Query Frame = 1
Query: 124 QVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKG-AEGYRSYDTAVLTLFSAMLGNFEFEVFDGV-----------QHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV 561
Q+I M+ + F V + VVM GF +AF +F G D E + S+ TA L++F A LG F FE F V + AGT LL YL V+A+++LNLL+AVL A+ V +N KEF +++T L ++S + +P P N++Q+
Sbjct: 3 QIIWRMMSQTLRFGVFIVVVMAGFALAFTTVF---GSCNADSLLGESFGSFGTAFLSVFEAPLGEFSFEDFHDVGTQCPDNPAPGRASDAGTFLLVAYLVVLAVVMLNLLVAVLTTAHGEVNANGEKEFHLARTRLILQSARAVAHRRIPPPLNLVQL 157
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 1.360e-13 Identity = 62/173 (35.84%), Postives = 92/173 (53.18%), Query Frame = 1
Query: 46 ALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGAEGYRSYDTAVLTLFSAMLGNFEF-EVFDGVQHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV 561
ALS PL+ R+L AQ+ + GPMVQ VI M L F V+ VVM+GFT+A +F + +L LF AMLG F + F G ++ T+L+ YL ++ +MLLNLLIA+L+ + V N F+VS+ + + ++LP PFN++Q+
Sbjct: 841 ALSAPLVVARVLFFAQILQFQGPMVQ-VIFRMTATLLQFGAVMLVVMIGFTMALHVIF------------RDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQL 1000
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: A0A835SSP9_CHLIN (Ion_trans domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SSP9_CHLIN) HSP 1 Score: 72.0 bits (175), Expect = 2.590e-11 Identity = 50/168 (29.76%), Postives = 93/168 (55.36%), Query Frame = 1
Query: 67 WYRLLSLA-QLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGAEGYRSYDTAVLTLFSAMLGNFEFEVFDGVQHG--LAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV 561
W R L +A ++ LGP++ V +M +E+ F+ + +++ GF+ A+F + + Y ++ ++LTLFS+MLGNF+ +FDG+ L G ++ +L + AI+LLNLL+A++ Y +F+ +Q + ++ NL+ +PF++LQV
Sbjct: 1110 WVRALGMAVPVYPTLGPLLNTVARMM-EEVVAFLFPMLIILTGFSTMMSAVFQ-------ESVPDSYGNFAASMLTLFSSMLGNFDLTIFDGLPTAQRLYGIIMSVIFLVISAILLLNLLVAIITNRYRPEEVEAETKFKKAQIVNYYQT--QVSRNLICSPFSLLQV 1267
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: A0A8J4AKS7_9CHLO (Ion_trans domain-containing protein (Fragment) n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AKS7_9CHLO) HSP 1 Score: 70.9 bits (172), Expect = 6.260e-11 Identity = 53/168 (31.55%), Postives = 89/168 (52.98%), Query Frame = 1
Query: 67 WYRLLSLA-QLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGAEGYRSYDTAVLTLFSAMLGNFEFEVFDGVQ--HGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV 561
W R L +A ++ LGP++ V +M +E+ F+ + +VM GF+ A+ Y A Y S+ A+L LFS+MLGNF+F FD + L G ++L +L + AI+L+NLLIA++ Y +F+ +Q + ++ NL+ +PF + Q+
Sbjct: 934 WVRALGMAVPVYPSLGPLLNTVARMM-EEVIAFLFPMLIVMTGFSTMMAAI--------YQDLASEYNSFPQAMLQLFSSMLGNFDFTAFDNLTTLQKLYGIIILVIFLVISAILLMNLLIAIITNRYRPQEVEAESQFKKAQVVSYYQT--QVTRNLVCSPFCLSQL 1090 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8113.1.1 >prot_P-wetherbeei_contig8113.1.1 ID=prot_P-wetherbeei_contig8113.1.1|Name=mRNA_P-wetherbeei_contig8113.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=187bp MSEGKQALFCAQLLLALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKEback to top mRNA from alignment at P-wetherbeei_contig8113:939..2119- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8113.1.1 ID=mRNA_P-wetherbeei_contig8113.1.1|Name=mRNA_P-wetherbeei_contig8113.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1181bp|location=Sequence derived from alignment at P-wetherbeei_contig8113:939..2119- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8113:939..2119- >mRNA_P-wetherbeei_contig8113.1.1 ID=mRNA_P-wetherbeei_contig8113.1.1|Name=mRNA_P-wetherbeei_contig8113.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=561bp|location=Sequence derived from alignment at P-wetherbeei_contig8113:939..2119- (Phaeothamnion wetherbeei SAG_119_79)back to top |