prot_P-wetherbeei_contig8113.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig8113.1.1
Unique Nameprot_P-wetherbeei_contig8113.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length187
Homology
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 1.080e-26
Identity = 83/193 (43.01%), Postives = 114/193 (59.07%), Query Frame = 0
Query:    9 FCAQLLLALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGA---EGYRSYDTAVLTLFSAMLGNFEFEVFDGV-----------QHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV 187
            F AQ  LA S PLL+ RLL L+Q+   LGPM+Q +I  ML +   F V + VVM GF +AF A+F        D G+   E Y S+ TA LT+F A LG F+FE FD V           +   AGT LL  YL V+A+++LNLLIAVL+ A+  V +N  KEF +++T L ++S +      +P PFN++Q+
Sbjct: 1144 FVAQFFLAASAPLLFARLLRLSQIDSTLGPMIQ-IIWRMLSQTLRFGVFIVVVMAGFALAFNAVFGSC-----DAGSDLDESYGSFGTAFLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLVVLAVVMLNLLIAVLSTAHGEVYANGEKEFHLARTRLILQSARAVAHRRIPPPFNLVQL 1330          
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 7.200e-20
Identity = 73/175 (41.71%), Postives = 101/175 (57.71%), Query Frame = 0
Query:   14 LLALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGAEGYRSYDTAVLTLFSAMLGNFEF-EVFDGVQHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV 187
            L ALS PL++ RLL  AQ+ R  GPM+Q V + M  EL  F VV+ VVM+GF ++F ALF                ++    LTLF AMLG  +F   F G Q+    T L   YL V+A+MLLNLLIAVL+ +++ V    ++EF+VS+  +        +M LLP PFN++Q+
Sbjct:  901 LYALSAPLIFSRLLFFAQMLRFHGPMIQVVFS-MTAELVKFGVVIIVVMLGFAMSFHALFGDVD------------TFGGTCLTLFKAMLGEVDFFGSFPGNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQL 1062          
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: D7FMR2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR2_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 7.410e-20
Identity = 71/189 (37.57%), Postives = 103/189 (54.50%), Query Frame = 0
Query:    6 QALFCAQLLLALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGAEGYRSYDTAVLTLFSAMLGNFEFEVFDGVQHGL---------AGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNIL 185
            QA F A+  LA   PLL+ R+LSLAQ+    GPM Q + N ML  LA F V + VVM+ F +AF +L+S       D+  E YR+   ++L +F +MLG+  F+ F+  ++           AG  LL  Y+ + AI++LNLLIAVL+  +  V  N   EF ++++     S    E   LP P N+L
Sbjct: 1449 QAFFIARFSLAAIAPLLFARVLSLAQVDNTFGPMTQIIWN-MLFHLARFSVFMLVVMVSFALAFHSLYSDPNCSEGDELFESYRTLRESLLDMFRSMLGDANFDRFEADRNLTCTGPSWEFDAGITLLTIYIVLQAILMLNLLIAVLSTVHDTVSENAITEFHLARSQFIQASAASVEGGRLPPPLNLL 1636          
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 1.560e-18
Identity = 70/153 (45.75%), Postives = 92/153 (60.13%), Query Frame = 0
Query:    9 FCAQLLLALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGA---EGYRSYDTAVLTLFSAMLGNFEFEVFDGV-----------QHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAY 147
            F AQ  LA+S PLL+ RLL L+Q+   LGPM+Q +I  ML +   F V + VVM GF +AF A+F        D G+   E Y S+ TA+LT+F A LG F+FE FD V           +   AGT LL  YL V+A+++LNLLIAVL+ A+
Sbjct: 1142 FVAQFFLAVSAPLLFARLLRLSQIDNTLGPMIQ-IIWRMLSQTLRFGVFIVVVMAGFALAFNAVFGSC-----DAGSGLDESYGSFGTALLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLIVLAVVMLNLLIAVLSTAH 1288          
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.900e-17
Identity = 70/202 (34.65%), Postives = 106/202 (52.48%), Query Frame = 0
Query:    8 LFCAQLLLALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKG----------AEGYRSYDTAVLTLFSAMLGNFEFEVF------------DGVQHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV 187
            LF AQ   A S PLL+ RLL L+Q+   LGPM Q VI  M+ +   F   + VVM+ F +AF A+F   G                  + + ++  + +T+FSA LG  +FE++            DG Q   AG  L+  Y+ +MA++LLNLLIAVL+ A++ V  N +KEF +++  L  +S +       P P N+++V
Sbjct: 1212 LFHAQFFYAASAPLLFSRLLVLSQIDATLGPMTQ-VIWRMISDTLRFSAFISVVMLSFALAFHAVFHTCGEFEDPTCNTNDDPDFPLRDAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCKLPDGAQE--AGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNGDKEFHLARAKLIYQSARVVTRRRPPPPLNLVKV 1410          
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: D7FMG5_ECTSI (Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG5_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 1.130e-16
Identity = 65/176 (36.93%), Postives = 100/176 (56.82%), Query Frame = 0
Query:   14 LLALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGAEGYRSYDTAVLTLFSAMLGNFEF--EVFDGVQHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV 187
            L ALS PL++ R+L   Q  +R G +V Q++ ++  E+  F +VLG +MMGFTV+F ALF            E  +SY    L +F AMLG      E+++   +     VLL  YLTV+A+MLLNLLIAVL+  +  V    +  F+ S+  +    ++  + ++LP+PFN+ Q+
Sbjct:  586 LFALSAPLVFSRVLFFGQFLKRQG-LVIQMMTILFGEMLQFALVLGTIMMGFTVSFYALF------------EEAKSYGDVWLDVFKAMLGEVSVFSEIYEDSVYRDVARVLLVVYLTVVAVMLLNLLIAVLSTEHAKVDEQQDIAFRESKVRIMKLYVRIVDSDVLPSPFNLPQI 748          
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.870e-16
Identity = 65/173 (37.57%), Postives = 92/173 (53.18%), Query Frame = 0
Query:   16 ALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGAEGYRSYDTAVLTLFSAMLGNFEF-EVFDGVQHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV 187
            ALS PLL  R L   Q+H   GPMV   I  M   L  F  V+ VVM+GFT+AF  LF              + S+  + L LF AM G   F   F G  +    T+LL  YL+++ I+LLNLL+A+L+ +++ V  NI++EF+ S   +          ++LP PFN+LQ+
Sbjct:  664 ALSAPLLVSRALFFVQIHPLQGPMV---IFRMTTVLLKFGFVMAVVMIGFTMAFHVLF------------RDFDSFGESFLELFKAMFGETTFFNAFSGDTYDAVATMLLVVYLSIVTILLLNLLVAILSTSHSKVQKNIDREFKASIARMMDHYQLVVTNDILPAPFNLLQL 821          
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 5.310e-16
Identity = 72/175 (41.14%), Postives = 98/175 (56.00%), Query Frame = 0
Query:   14 LLALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGAEGYRSYDTAVLTLFSAMLGNFE-FEVFDGVQHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV 187
            L A+  PL+++RLL  AQ+    G  +Q V+  M  EL  F VV+GVV++GF ++F ALF        D   E  R    A+L  F AMLG    F+ F G +H LA TVLL +YL VM IMLLNLLIAVL+ A+  V   +    +VS+  ++         + LP PFN+ Q+
Sbjct:  753 LYAVGSPLMYWRLLYYAQVIPSQGSTIQ-VLYSMASELGQFFVVMGVVILGFAMSFFALFR-------DVKGETLRG---ALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLLVMTIMLLNLLIAVLSTAHGKVEEAVL--IRVSRARVYTHYRWVVATDALPAPFNLAQL 914          
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 7.140e-16
Identity = 72/175 (41.14%), Postives = 98/175 (56.00%), Query Frame = 0
Query:   14 LLALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGAEGYRSYDTAVLTLFSAMLGNFE-FEVFDGVQHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV 187
            L A+  PL+++RLL  AQ+    G  +Q V+  M  EL  F VV+GVV++GF ++F ALF        D   E  R    A+L  F AMLG    F+ F G +H LA TVLL +YL VM IMLLNLLIAVL+ A+  V   +    +VS+  ++         + LP PFN+ Q+
Sbjct:  662 LYAVGSPLMYWRLLYYAQVIPSQGSTIQ-VLYGMASELGQFFVVMGVVILGFAMSFFALFR-------DVKGETIRG---ALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLVVMTIMLLNLLIAVLSTAHGKVEEAVL--IRVSRARVYTHYRWVVATDALPAPFNLAQL 823          
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Match: D7FNX2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX2_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 2.570e-14
Identity = 58/158 (36.71%), Postives = 86/158 (54.43%), Query Frame = 0
Query:   42 QVINLMLKELATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKG-AEGYRSYDTAVLTLFSAMLGNFEFEVFDGV-----------QHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAVMSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV 187
            Q+I  M+ +   F V + VVM GF +AF  +F   G    D    E + S+ TA L++F A LG F FE F  V           +   AGT LL  YL V+A+++LNLL+AVL  A+  V +N  KEF +++T L ++S +      +P P N++Q+
Sbjct:    3 QIIWRMMSQTLRFGVFIVVVMAGFALAFTTVF---GSCNADSLLGESFGSFGTAFLSVFEAPLGEFSFEDFHDVGTQCPDNPAPGRASDAGTFLLVAYLVVLAVVMLNLLVAVLTTAHGEVNANGEKEFHLARTRLILQSARAVAHRRIPPPLNLVQL 157          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8113.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JB40_9PHAE1.080e-2643.01Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FLB1_ECTSI7.200e-2041.71Ankyrin Repeat Transient Receptor Potential Channe... [more]
D7FMR2_ECTSI7.410e-2037.57Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FX79_ECTSI1.560e-1845.75Ankyrin Repeat Transient Receptor Potential Channe... [more]
D8LHA0_ECTSI1.900e-1734.65Transient Receptor Potential Channel. Partial sequ... [more]
D7FMG5_ECTSI1.130e-1636.93Transient receptor potential channel n=1 Tax=Ectoc... [more]
A0A6H5JG42_9PHAE3.870e-1637.57Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JMG8_9PHAE5.310e-1641.14Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FR83_ECTSI7.140e-1641.14Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
D7FNX2_ECTSI2.570e-1436.71Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002153Transient receptor potential channel, canonicalPRINTSPR01097TRNSRECEPTRPcoord: 177..187
score: 39.92
coord: 125..146
score: 38.77
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 19..150
e-value: 2.4E-11
score: 43.0
NoneNo IPR availableGENE3D1.10.287.70coord: 43..172
e-value: 9.4E-6
score: 27.1
NoneNo IPR availablePANTHERPTHR10582:SF2INACTIVEcoord: 12..160
IPR024862Transient receptor potential cation channel subfamily VPANTHERPTHR10582TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEINcoord: 12..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8113contigP-wetherbeei_contig8113:939..2119 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8113.1.1mRNA_P-wetherbeei_contig8113.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig8113 939..2119 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig8113.1.1 ID=prot_P-wetherbeei_contig8113.1.1|Name=mRNA_P-wetherbeei_contig8113.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=187bp
MSEGKQALFCAQLLLALSGPLLWYRLLSLAQLHRRLGPMVQQVINLMLKE
LATFMVVLGVVMMGFTVAFVALFSPSGVIRYDKGAEGYRSYDTAVLTLFS
AMLGNFEFEVFDGVQHGLAGTVLLCTYLTVMAIMLLNLLIAVLAAAYTAV
MSNINKEFQVSQTFLFMESIKGAEMNLLPTPFNILQV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002153TRPC_channel
IPR013122PKD1_2_channel
IPR024862TRPV