mRNA_P-wetherbeei_contig800.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig800.1.1
Unique NamemRNA_P-wetherbeei_contig800.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: A0A4D9D361_9STRA (GSDH domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D361_9STRA)

HSP 1 Score: 160 bits (404), Expect = 2.990e-39
Identity = 94/267 (35.21%), Postives = 143/267 (53.56%), Query Frame = 3
Query:  510 IEKAVYELADHGPTGMLVHPDFPKTPSIFVFYTAD-PTDKWDDKCP-------LKPDADGFSYCDSKQRLERFDLKVTMTGTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDVCFNAAKKLPQGRWRSLRMDGFLQGKLLLIKAASLLKNSGLTLNNDYNIVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPLNFGWPCLEGSSDFANPTDDDFKWLK-NTC 1283
            I + VY   DHG     VHPDFP+ P +F+ Y+A+ P   W+D C        +   AD   YC +  ++ R  +    T       A  D++ L  DWC+++ +H  G + +    +MI  +GDG      D+GQ Q D C +      QG + S + DG+L+GK ++IK  SLLK+  L  N DY +++ G R P+ +T++P TGDV  GDVGS +WEE+N I N        + +NFGWPC+EG +  ++   +  K  + +TC
Sbjct:   91 INEEVYSWWDHGLLSAAVHPDFPQKPYLFIAYSAEYPGKPWNDNCEVDYRLSHMTTPADTRPYCKTMAKIIRLTVDEDFTT------ATFDAE-LFHDWCTSTYTHHVGTMNFLEDGSMIYGAGDGSHFQGIDHGQPQ-DECTDPQGPKDQGVFLSQK-DGYLRGKFIVIKPESLLKDEHLQANVDYTVISRGARNPFRSTIDPMTGDVFFGDVGSSVWEEINHIPNP---LDLDYVMNFGWPCIEGENSVSDIFQNFLKMNRLDTC 345          
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: A0A4D9D6I0_9STRA (GSDH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6I0_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.280e-36
Identity = 93/267 (34.83%), Postives = 137/267 (51.31%), Query Frame = 3
Query:  450 KSGNFIAFSDVADEKTFEFSIEKAVYELADHGPTGMLVHPDFPKTPSIFVFYTAD-PTDKWDDKCPLKPDA-------DGFSYCDSKQRLERFDLKVTMTGTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDVCFNAAKKLPQGRWRSLRMDGFLQGKLLLIKAASLLKNSGLTLNNDYNIVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPLNFGWPCLEG 1226
            KS +++   D+ D+          VY   DHG      HP FP+ P +++ Y+++ P + W D+C   P         D   YC +  +L R  +   +T  +         Q L +DWCS++ +H  G I W    +MI  +GDG      D+GQ Q D C +      QG + + + D +L+GK L I  A++LKN  L    DY+ ++ G R P+  TV+P TGD+ IGDVGS +WEE+N I N  +S     P NFGWPC+EG
Sbjct:   71 KSQDYVTLLDIKDQ----------VYSWWDHGLLSASFHPQFPQQPYLYIAYSSESPGNPWQDQCVPDPKKVAMTNPPDTRPYCKTMAKLVRLKVDPDLTSAKF-------DQELFQDWCSSTYTHHVGTINWLEDGSMIYGAGDGSHFQGLDHGQPQ-DECTDPKGPKDQGVFTAQK-DAYLRGKFLHISPAAVLKNGYLQGGQDYSQISKGSRNPFRTTVDPKTGDIYIGDVGSSVWEEINRIPNP-LSADYRKP-NFGWPCVEG 316          
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: A0A0G4IYG1_PLABS (PKD domain-containing protein (Fragment) n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYG1_PLABS)

HSP 1 Score: 151 bits (381), Expect = 6.510e-36
Identity = 103/283 (36.40%), Postives = 142/283 (50.18%), Query Frame = 3
Query:  438 FVIDKSGNFIAFSDV-ADEKTFEFSIEKA---VYELADHGPTGMLVHPDFPKTPSIFVFYTADPTDKWD-------DK--CPLKPDADGFSYCDSKQRLERFDLKVTMT-GTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDVCFNAAKKLPQGRWRSLRMDGFLQGKLLLIKAASLLKNSGLTL-NNDYNIVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPLNFGWPCLEGSSDFA 1241
            F+ +K G    +  + ADE  F +  ++     Y   D G  G+ V  ++P  P ++VFY+ +     D       DK  CP    AD  SYC +   L R  + V    GT          QVL+ DWCS S SH  G++ W     + LT+GDG      D G    D C+N      QG +RS  M+ +LQGKLL     SL+ +  L+L NND+ I+A GLR PY  TV+P+TGD+ +GDVGS  WEE+N + N      +    NFGWPC EG+  + 
Sbjct:   60 FLTEKDGRIRLYPSIEADENDFVYVFDQEYEKTYTWWDRGMLGVAVDQNYPDAPFLWVFYSVNRLPGLDGPDFNLFDKTTCP----ADRHSYCGTAAHLVRVRVDVPRRKGTI--------EQVLVSDWCSASGSHHIGDLVWAPDGGLYLTAGDGASFDFGDVGVPT-DRCYNHDDPRLQGSFRSQHME-YLQGKLLYFSKESLMADRVLSLKNNDFKILAKGLRNPYRFTVDPYTGDLYVGDVGSDYWEEINRVPNPLDPANAGKMPNFGWPCYEGNYPYV 328          
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: A0A3P3Y1N1_PLABS (PKD domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y1N1_PLABS)

HSP 1 Score: 151 bits (381), Expect = 7.080e-36
Identity = 103/283 (36.40%), Postives = 142/283 (50.18%), Query Frame = 3
Query:  438 FVIDKSGNFIAFSDV-ADEKTFEFSIEKA---VYELADHGPTGMLVHPDFPKTPSIFVFYTADPTDKWD-------DK--CPLKPDADGFSYCDSKQRLERFDLKVTMT-GTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDVCFNAAKKLPQGRWRSLRMDGFLQGKLLLIKAASLLKNSGLTL-NNDYNIVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPLNFGWPCLEGSSDFA 1241
            F+ +K G    +  + ADE  F +  ++     Y   D G  G+ V  ++P  P ++VFY+ +     D       DK  CP    AD  SYC +   L R  + V    GT          QVL+ DWCS S SH  G++ W     + LT+GDG      D G    D C+N      QG +RS  M+ +LQGKLL     SL+ +  L+L NND+ I+A GLR PY  TV+P+TGD+ +GDVGS  WEE+N + N      +    NFGWPC EG+  + 
Sbjct:   60 FLTEKDGRIRLYPSIEADENDFVYVFDQEYEKTYTWWDRGMLGVAVDQNYPDAPFLWVFYSVNRLPGLDGPDFNLFDKTTCP----ADRHSYCGTAAHLVRVRVDVPRRKGTI--------EQVLVSDWCSASGSHHIGDLVWAPDGGLYLTAGDGASFDFGDVGVPT-DRCYNHDDPRLQGSFRSQHME-YLQGKLLYFSKESLMADRVLSLKNNDFKILAKGLRNPYRFTVDPYTGDLYVGDVGSDYWEEINRVPNPLDPANAGKMPNFGWPCYEGNYPYV 328          
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: A0A8J4A6R5_9ACTN (PKD domain-containing protein n=1 Tax=Virgisporangium ochraceum TaxID=65505 RepID=A0A8J4A6R5_9ACTN)

HSP 1 Score: 117 bits (292), Expect = 2.090e-24
Identity = 94/284 (33.10%), Postives = 124/284 (43.66%), Query Frame = 3
Query:  438 FVIDKSGNFIAFSDVADEKTFEFS-IEKAVYELADHGPTGMLVHPDFPKTPSIFVFYTADP-----TDKWDDKCPLKPDADGFSYCDSKQRLERFDLKV-TMTGTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDV----CFNAAKKLPQGRWRSLRMDGF---LQGKLLLIK-----AASLLKNSGLTLNNDYNIVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPLNFGWPCLEGSS 1232
            FV +K G    F D+AD     F+ +   V+   D G  GM++ P+FP  P ++V YT D         W+D C    D      C    RL R      TMTGT          QVL+ DWC    SH  G+I +     + + +GDG   +  DYGQ         C + A +    R + LR  G    L G LL +      AA    NS     +   IVA GLR PY  T+ P T +  I D G   WEEVN + +     P+    NFGWPC EG++
Sbjct:   60 FVAEKGGRIKVFDDLADTTPTVFADLSANVHNQWDRGLLGMVLAPNFPTNPYVYVLYTYDAPPGQVAPVWNDVCANANDG----RCVVTGRLSRLQANGNTMTGTE---------QVLLHDWCQQFPSHSIGDIAFGADGMLYVAAGDGASFNAVDYGQLPSGAPTNPCGDPANEGGALRSQDLRTPGDETQLDGTLLRLDPATGAAAPGNPNSASADPDTRRIVAHGLRNPYRITMRPGTNETWISDTGWNTWEEVNRVPD-----PTTGVTNFGWPCWEGNA 325          
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: A0A7W7WR06_9ACTN (Glucose/arabinose dehydrogenase n=1 Tax=Micromonospora polyrhachis TaxID=1282883 RepID=A0A7W7WR06_9ACTN)

HSP 1 Score: 110 bits (275), Expect = 2.850e-22
Identity = 104/337 (30.86%), Postives = 145/337 (43.03%), Query Frame = 3
Query:  315 RGAEAANPKMLNPSFVFDSYNIPATGTRRMETRFSPCSDHTFVIDKSGNFIAFSDVADEKTFEFS-IEKAVYELADHGPTGMLVHPDFPKTPSIFVFYTAD-------PTDKWDDKCPLKPDADGFSYCDSKQRLERF--DLKVTMTGTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQ------GD--VCFNAAKKLPQGRWRSLRMDGF--------LQGKLLLIK--AASLLKNSGLTLNNDYN---IVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPL-NFGWPCLEGS 1229
            R A+A  P       VF         TR  +  FSP     FV  K+G    F  ++D     F+ +   VY+  D G  G+ + PDFP  P ++V Y+ D       PT  ++D C           C +  R+ R   D  V MTGT          QVL+ DWC    SH  G++ +     + +T GDG   + +DYGQ        GD       A   P     +LR            L G L+ I     + L ++    + D N   IVA GLR PY     P T +V +GDVG ++WEE+N IT+     P+  P+ N+GWPC EG+
Sbjct:   20 RPAQATPPAGFTQQVVFSGL------TRPTKLVFSP-DGRIFVGQKNGIIKVFDGLSDTTATVFADLRSNVYDFEDLGLIGLALAPDFPADPWVYVSYSYDGMIGGSAPT--YNDACAA------IGSCPASSRVSRLRADGNV-MTGTE---------QVLLHDWCQQIESHSIGDLAFGPDGALYVTGGDGASGTFTDYGQAGNPTNPCGDPPAPIGGAMTPPTAEGGALRSQDVRTPADPTGLSGTLIRINPTTGAALPDNPWASSADANTRRIVAYGLRNPYRWAFRPGTSEVWLGDVGWRVWEEINRITD-----PAGGPVRNYGWPCYEGN 326          
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: UPI001945A094 (PQQ-dependent sugar dehydrogenase n=1 Tax=Plantactinospora mayteni TaxID=566021 RepID=UPI001945A094)

HSP 1 Score: 104 bits (259), Expect = 1.160e-20
Identity = 98/339 (28.91%), Postives = 144/339 (42.48%), Query Frame = 3
Query:  321 AEAANPKMLNPSFVFDSYNIPATGTRRMETRFSPCSDHTFVIDKSGNFIAFSDVADEKTFEFS-IEKAVYELADHGPTGMLVHPDFP-KTPSIFVFYTAD-------PTDKWDDKCPLKPDADGFSYCDSKQRLERFDLKVTMTGTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQ--KQGDVC------FNAAKKLPQGRWRSLRMDGF--------LQGKLLLIKAAS--LLKNSGLTLNNDYN---IVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPL-NFGWPCLEGSSDFAN 1244
            A AA P       VF     P       +  FSP     FV +KSG    F  +AD     F+ + + V++ +D G  G+ + P FP + P ++V YT D       PT  +DD+C           C    R+ R  +          N  LV+ +VL+ DWC  S +H  G+I + +   +++  GDG      DYGQ     + C         A   P     +LR            L G L+ +   +     ++ L  + D N   IVA GLR P+     P TG+V +GDVG + WEE++ + N     P   P+ N+GWPC EG+    N
Sbjct:   28 ARAALPPGFTDQVVFAGLTEPT------KVAFSP-DGRVFVAEKSGFVKVFDSLADSTPTVFADLRRQVFDYSDLGLVGLALPPGFPTRNPWVYVSYTYDAPIGGTAPT--YDDRCSTS------DRCLVSARVSRLVIS---------NRQLVE-RVLLNDWCQQSDTHSIGDIAFASDGALLVAGGDGASGDVVDYGQLGNPTNPCGDPPAPVGGAMTPPTAEGGALRAQDVRTPADPTGLSGTLVRVHETTGKAPADNPLVASPDLNTRRIVAYGLRNPFRFVFRPGTGEVWLGDVGFRTWEEIDRLVN-----PLASPVPNYGWPCYEGAGQQPN 336          
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: A0A1H3RCP1_9ACTN (Alpha-amylase n=1 Tax=Asanoa ishikariensis TaxID=137265 RepID=A0A1H3RCP1_9ACTN)

HSP 1 Score: 99.8 bits (247), Expect = 1.140e-18
Identity = 85/293 (29.01%), Postives = 129/293 (44.03%), Query Frame = 3
Query:  441 VIDKSGNFIAFSDVADEKTFEFS-IEKAVYELADHGPTGMLVHPDFPKTPSIFVFYTAD-------PTDKWDDKCPLKPDADGFSYCDSKQRLERFDLKVT-MTGTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDVCFNAAKKLPQG-------------RWRSLRMDGF---LQGKLLLIKAAS--LLKNSGLTLNNDYN---IVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPL-NFGWPCLEG 1226
            +  K+G    +  ++D     F+ +   V+   D G   M V PDFP +P ++V YT D       PT  ++D+C +  D      C    R+ R  +    MTG+          QVL+ DWC    +H  GN+ +     + ++ GDG  PS  DYGQ+            P G             R + +R  G    L G  + +  A+   L ++ +  ++D N   I+A GLR PY     P T +V  GDVG ++WEE++      +  P   P+ NFGWPC EG
Sbjct:   64 IAQKNGVIKIYDSLSDTTPTVFADLSSEVFTYGDLGLLSMAVPPDFPDSPYVYVSYTYDGPIGGSAPT--YNDQCAVLGD------CVVSNRVSRLRIAGNVMTGSE---------QVLLHDWCHVYETHAVGNVGFGPDGALYVSGGDGASPSFPDYGQRGAVTNPCGDPGAPVGGTMTPPTAEGGALRSQDVRTPGDPTGLSGTFIRVDPATGAALPDNPMAGSSDPNTRRILAYGLRNPYRWVFRPGTSEVWFGDVGWRLWEEID-----RLPDPLNGPVENFGWPCYEG 334          
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: UPI001A615B4B (PQQ-dependent sugar dehydrogenase n=1 Tax=Asanoa iriomotensis TaxID=234613 RepID=UPI001A615B4B)

HSP 1 Score: 99.4 bits (246), Expect = 1.530e-18
Identity = 86/293 (29.35%), Postives = 130/293 (44.37%), Query Frame = 3
Query:  441 VIDKSGNFIAFSDVADEKTFEFS-IEKAVYELADHGPTGMLVHPDFPKTPSIFVFYTAD-------PTDKWDDKCPLKPDADGFSYCDSKQRLERFDLKV-TMTGTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDVCFNAAKKLPQG-------------RWRSLRMDGF---LQGKLLLIK---AASLLKN--SGLTLNNDYNIVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPL-NFGWPCLEG 1226
            +  K+G    + +++D     F+ + + V+   D G  G+ V PDFP TP ++V YT D       PT  ++D+C +  D      C    R+ R  +    MTG+          QVL+ DWC    +H  G+I +     + ++ GDG  P+  DYGQ+            P G             R + +R  G    L G  + +     A+L  N  +G +  N   I+A GLR PY     P T +V  GDVG ++WEE++      +  P   P+ NFGWPC EG
Sbjct:   65 IAQKNGVIKIYDNLSDTTPTVFADLSQQVFTYGDLGLLGLAVPPDFPATPWVYVSYTYDGQIGGSAPT--YNDRCAVLGD------CIVSNRVSRLRIAGDVMTGSE---------QVLLHDWCHLYETHAVGDIGFGPDGALYVSGGDGASPAFPDYGQRGTVTNACGDPGAPVGGTMTPPTAEGGALRSQDVRTPGDPTGLSGTFIRVDPNTGAALPDNPMAGSSDPNTRRILAYGLRNPYRWAFRPGTSEVWFGDVGWRLWEEID-----RLPDPLNSPVENFGWPCYEG 335          
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: A0A7X0VBM4_9ACTN (PQQ-dependent sugar dehydrogenase n=2 Tax=Nocardioides luti TaxID=2761101 RepID=A0A7X0VBM4_9ACTN)

HSP 1 Score: 98.2 bits (243), Expect = 2.910e-18
Identity = 87/294 (29.59%), Postives = 132/294 (44.90%), Query Frame = 3
Query:  414 FSPCSDHTFVIDKSGNFIAFSDVADEKTFEFS-IEKAVYELADHGPTGMLVHPDFPKTPSIFVFYTAD-------PTDKWD------DKCPLKPDADGFSYCDSKQRLERFDLKVTMTGTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDVCFNAAKKLPQGRWRSLRMDGF---LQGKLLLIKAASLLKNSG--LTLNNDYN---IVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPLNFGWPCLEGS 1229
            F+P     FV +K+G    F  + D     F+ +   V    D G  G+ + P+FP  P ++V Y  +       P  +W       D CP  P AD    C    R+ R    +T  G + T     + QVL+ED+C    SH  G + +     +  ++G+G   +  DYGQ  G+ C +   +    R + LR  G    L G ++ I   + L   G  L  + D N   I+A G R P+     P T  V++GDVGS  +EE+N +     +TP    ++FGWPC EG+
Sbjct:   56 FAP-DGRVFVAEKTGVIKVFDGLDDTDADVFADLNVNVENFYDRGLLGLTLDPEFPARPYVYVSYAYNHVLGDPAPAPRWGEPGQYYDDCPDPPGADDQG-CVVSGRVSR----LTADGNQVTG----EEQVLVEDYCLQFPSHATGTVAFGPDGALYASAGEGANYNYEDYGQT-GNPCGDPVDEGGALRAQDLRTGGDPVGLNGTVIRIDPDTGLGAPGNPLASSPDLNARRIIADGFRNPFRFAFRPGTSQVVVGDVGSFQYEELNTLPT---TTPDQ-VVDFGWPCYEGA 334          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D9D361_9STRA2.990e-3935.21GSDH domain-containing protein n=1 Tax=Nannochloro... [more]
A0A4D9D6I0_9STRA1.280e-3634.83GSDH domain-containing protein n=2 Tax=Monodopsida... [more]
A0A0G4IYG1_PLABS6.510e-3636.40PKD domain-containing protein (Fragment) n=1 Tax=P... [more]
A0A3P3Y1N1_PLABS7.080e-3636.40PKD domain-containing protein n=1 Tax=Plasmodiopho... [more]
A0A8J4A6R5_9ACTN2.090e-2433.10PKD domain-containing protein n=1 Tax=Virgisporang... [more]
A0A7W7WR06_9ACTN2.850e-2230.86Glucose/arabinose dehydrogenase n=1 Tax=Micromonos... [more]
UPI001945A0941.160e-2028.91PQQ-dependent sugar dehydrogenase n=1 Tax=Plantact... [more]
A0A1H3RCP1_9ACTN1.140e-1829.01Alpha-amylase n=1 Tax=Asanoa ishikariensis TaxID=1... [more]
UPI001A615B4B1.530e-1829.35PQQ-dependent sugar dehydrogenase n=1 Tax=Asanoa i... [more]
A0A7X0VBM4_9ACTN2.910e-1829.59PQQ-dependent sugar dehydrogenase n=2 Tax=Nocardio... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig800contigP-wetherbeei_contig800:3894..8184 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog58123.JOFJ01000005_gene1413
PFAMsBig_5,CBM_6,CarboxypepD_reg,DUF1080,DUF1349,F5_F8_type_C,GSDH,PA14,PKD,Ricin_B_lectin,ThuA
Model size1284
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categorysignal peptide
Exons10
Evalue3.5e-29
EggNOG OGsCOG2133@1|root,COG3291@1|root,COG3828@1|root,COG2133@2|Bacteria,COG3291@2|Bacteria,COG3828@2|Bacteria,2GJFY@201174|Actinobacteria,4EKGY@85012|Streptosporangiales
DescriptionRepeats in polycystic kidney disease 1 (PKD1) and other proteins
Cds size1077
COG categoryG
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig800.1.1prot_P-wetherbeei_contig800.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig800 4100..8184 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187014.6252553-UTR-P-wetherbeei_contig800:3893..40991683187014.6252553-UTR-P-wetherbeei_contig800:3893..4099Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig800 3894..4099 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187014.637159-CDS-P-wetherbeei_contig800:4099..43721683187014.637159-CDS-P-wetherbeei_contig800:4099..4372Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig800 4100..4372 +
1683187014.6458604-CDS-P-wetherbeei_contig800:4822..48861683187014.6458604-CDS-P-wetherbeei_contig800:4822..4886Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig800 4823..4886 +
1683187014.6550152-CDS-P-wetherbeei_contig800:5213..52921683187014.6550152-CDS-P-wetherbeei_contig800:5213..5292Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig800 5214..5292 +
1683187014.665094-CDS-P-wetherbeei_contig800:5523..56141683187014.665094-CDS-P-wetherbeei_contig800:5523..5614Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig800 5524..5614 +
1683187014.674942-CDS-P-wetherbeei_contig800:5904..59951683187014.674942-CDS-P-wetherbeei_contig800:5904..5995Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig800 5905..5995 +
1683187014.6847155-CDS-P-wetherbeei_contig800:6385..64501683187014.6847155-CDS-P-wetherbeei_contig800:6385..6450Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig800 6386..6450 +
1683187014.697053-CDS-P-wetherbeei_contig800:6658..67811683187014.697053-CDS-P-wetherbeei_contig800:6658..6781Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig800 6659..6781 +
1683187014.7061126-CDS-P-wetherbeei_contig800:7062..72261683187014.7061126-CDS-P-wetherbeei_contig800:7062..7226Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig800 7063..7226 +
1683187014.7297843-CDS-P-wetherbeei_contig800:7659..77651683187014.7297843-CDS-P-wetherbeei_contig800:7659..7765Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig800 7660..7765 +
1683187014.7463913-CDS-P-wetherbeei_contig800:8163..81841683187014.7463913-CDS-P-wetherbeei_contig800:8163..8184Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig800 8164..8184 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig800.1.1

>prot_P-wetherbeei_contig800.1.1 ID=prot_P-wetherbeei_contig800.1.1|Name=mRNA_P-wetherbeei_contig800.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=359bp
MRDCQRGGRRGASSITSTNSMRAIVVGAGLGLAAVLRGAEAANPKMLNPS
FVFDSYNIPATGTRRMETRFSPCSDHTFVIDKSGNFIAFSDVADEKTFEF
SIEKAVYELADHGPTGMLVHPDFPKTPSIFVFYTADPTDKWDDKCPLKPD
ADGFSYCDSKQRLERFDLKVTMTGTRCTNFALVDSQVLIEDWCSTSSSHG
NGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDVCFNAAKKLPQGRWRSL
RMDGFLQGKLLLIKAASLLKNSGLTLNNDYNIVASGLRQPYVNTVNPWTG
DVLIGDVGSKIWEEVNVITNKEMSTPSLWPLNFGWPCLEGSSDFANPTDD
DFKWLKNTC
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mRNA from alignment at P-wetherbeei_contig800:3894..8184+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig800.1.1 ID=mRNA_P-wetherbeei_contig800.1.1|Name=mRNA_P-wetherbeei_contig800.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4291bp|location=Sequence derived from alignment at P-wetherbeei_contig800:3894..8184+ (Phaeothamnion wetherbeei SAG_119_79)
CGATGATCCGCTCGGGTCGTAATGAAAACACAACTGGGCGGATCGCTTCT TTCGTCTTTGAAACGGACAAGTGGTCGACAGAGGCAGCCGACGAGATTGA ATCCCGCCACCGAAGTGCGGTGGCTTCACCCAGAAAGTGCAGGGAAGAGA CTTGGGGAACACTGACAATCCAGAAAGTCTAGTGGCGAGACCCGAGTAGC AAGAGAATGCGGGATTGTCAGCGAGGAGGAAGAAGAGGCGCTAGCAGCAT CACCAGCACCAACAGCATGCGGGCTATAGTCGTTGGCGCAGGGCTTGGCC TCGCCGCGGTCCTTCGCGGTGCCGAAGCCGCAAATCCCAAAATGCTCAAC CCGTCCTTTGTCTTTGACAGCTACAACATCCCCGCGACGGGAACTCGCCG TATGGAGACGCGATTTTCTCCTTGTAGCGATCACACCTTCGTAATCGATA AATCGGGGAACTTCATCGCCTTCTCAGACGTGAGTCAGTGCGGCGGTCGC CGTCATGGTTACGTTAGATCCGTCCTTTGCGCTTGTTTTTCCATGTCGTG CCCTGTGAGGGGGATTGTGTGGGCCCCCTTTCCCCAGCACGTTGTAGCGC GCAGGGTTTCGGAGCTGCGTCAGAGCAGGTTTGCCTATGCCTGCTGCGAG CTTTCATTTCCTTTGTGGGAATATTTCAGGGTGCTCTACTCTTTTCTTTC CTTCTGAGGTCTTTATCAGCAGCTGTAGCGCAGAGACATGTGACAGCTAG TGGTGCCAAAAGTTACCCCAAGCGAGAACATTTTGAGCTCGCACCCTTAA CATCCGATACCTTTGTCGCTTGCCACGTCTTGCCGGCCTTCCTCACAATC GTGTGTCTGCTCTTTCTTCCCCTTTTTCTGTTTTTTCGCCCTTCGTTTTT TCGCTCTTTCCTCTTTTTCCCCCGTACAGGTGGCGGACGAAAAGACTTTT GAGTTCTCCATCGAAAAGGCCGTGTACGAGCTCGCCGACCACGGTACGCT CCCGAAAACTTCTTGCAATCTGCCACCCGTTTTCCAGTTTCAAGCCCTCG ACGCAGCGCCCAATTCACGACATCGCCGGCCCTATCGTTACCGCCACAAC TTATACTCATCGCACGTCGCTGTCGTGACCGCCGCTGCCCGCCATTGTTG CATGCCGTTTGCCATTGCTAGCACTGCTGCCACCACCGAATCCCATCAAA TCTGCCGTCGTTCGTACCTCTACCGCCAAGTCCGCCCTCCCTCCCTCTTA CCTCTTCCACCGCGTAACCGCTGTAACCACCATATGCAACCGTCGTAACC GCTCCGGACTCACTCTTCAGGCCCGACGGGCATGCTGGTCCATCCCGACT TCCCCAAGACGCCGTCCATCTTCGTCTTCTACACCGCCGACCCCACCGAG TGAGTGTCTTCGGAAAATTCGTTTCAGAAATTGGTTTCTTTTGTGTGGAG CAAACGGCAGTGGACTTTGCATTGAATCACCTGTTTCTGCGCTGCCTTGA TGAAACACCGACGTAGCCACGTCTCCAAAAACGGTCCTGACAAATGAACG GCCCCGGGAATCGCCCCTCAGAACTGTATCGTAAACCGGCCGAATACTGC CCTGAACTCGTTAAAAAATGTTCTTTGCAGCAAGTGGGACGACAAGTGCC CACTCAAGCCGGACGCTGACGGCTTCTCTTACTGCGACTCCAAGCAGCGG CTGGAGCGCTTTGACCTCAAGGTGGCCAACCCTGAATCCCTTTAAACCTT GACTAGGGTCCCCATAGCCACCGCGACAGGCTGGGGCCCGCTGTGCACTG CAGCAAGAGTGTGGAACCCAGCCCTTGTGTGCAGGAGAAGAACAGAGAAT GGGCCATTCCCCCTCGCTGCCATGATTTTTCCCACTCCATTTCCATTTGC TGGCCTAGATTTGAGTGCTCGCCAAAGACACGGCGGCCGACCGCGCTGGG CTCTGCGCTTTAACTCTCTAAGACCCCGTCCTAATCCAAAACTCGTTGAA CTTTTACGCAGGTGACCATGACCGGCACCCGCTGCACCAACTTCGCGCTC GTGGACAGCCAGGTCCTGATCGAGGACTGGTGCTCGACGTCTTCCTCCCA CGGTGAGGTCAAATCAGTTACGACTGAGTTACGGCGGTTACAGACTGAGG CAAAGTTGAGGCTCGCGGAGCTTCGATGGTTTGTTTCGCAGGCGCGGCGG TCTTGTGAGCCCATTCACGTCTCACGGCTGATTGAGTTACGAAGGCCATC TATAAAGTGATTTTGATCGGGTTTTCTCGTGCCGTGCGAAGTTGAGAAAG CCATCCTTTGCTCTGTCTCGGCTTCGCCTCATCCCGTGCCTTCACTTCCT CCCCGCCACCGGCGCCGGCGCCGCTGTGGCCGCCGCCCACGCCGCTGCCG ATATTCCTGCCGATGCTACTGCCGTCGCTGCCGCCCATTTCTCTGCGCCC CAAAATGACCAAAATCGTCACGTTCGAACCGAAAACAAAAAGGCAACGGC AACATTGAGTGGTGGAATGGCGCCAACATGATTCTGACCTCTGGCGACGG CGGCATGGTGAGTGAAAGCTGCCGGCAGGTTTCGGATTATTTATTCTTCT TTAGGGGAAGACGAAGACTAAGAGCGGTCTAACGAAAAGGCCGGCTACTG CTGCGGGTCAAACGAATGAATCGTTTGAAGAACACAAAACCCTCCCTTTG TGCTGACTTTGTACCCCCGCCCCAATTCCGAAACCGCCAAAACCGTCAAA ACTGTTTTGATACAGCCGTCGACAAGCGACTACGGGCAGAAGCAGGGCGA CGTGTGCTTCAACGCGGCCAAGAAGCTTCCGCAGGGCCGCTGGCGCTCGC TACGCATGGACGGTTTCCTACAGGGCAAGCTTTTGCTGGTGAGCGTATTT CTCTCTGTTTTTGTTTTTCCGCTTCTGTCCTCCTGGAAATGAAGGGTAAT TGTTTGGGGATTCGGGGATTCGAATTTTGCAATCATTCTTGTGGACGGGA GGGCTTTCCACATATCTTGGCGTATCGGAACTATCTTTGCTGCTGGCGTT TTCTTGTTGTCTGCCCTTGCTCGGGACTGACCTCCTCATGTCTGGCCTGC TTTCCCCCCGGAACGGAATCGTTAATCGTCGAATCGGAAATCCTCAAACC GGCGGGGGCTACCAAACAGATCAAGGCGGCGTCGCTCCTAAAGAATTCGG GCCTCACCCTCAACAACGATTACAACATTGTCGCGAGCGGCCTCCGGCAG CCGTACGTCAACACGGTGAACCCGTGGACGGGCGACGTTCTGATCGGCGA CGTCGGCAGCAAAATCTGGGAAGAGGTCAACGTGTGAGTTTAGTCTAGAA GCGGCAGATGGAAGGATGTCCGCTTTCTAGCAGGAGCGTCGCCTATCCAT TGCTCGTTTGCGAGGAAAGGCGCGCTCGATTCTCCGCGTGGAGGGGTTGT GCCGTTTGACGGATTTGACTGCGCTCTCGGTTAAGGGTTCTCTGTTCACT CCCCATCGGTTCTTTCGCCCTTTTTCCAATGATGTTCCAGCACGGCTCGG TCCTCGCCTTCCTCCTCCTGTTCCGTCGTTTCCTTTTGATGTTTTTGGTT TTTCCTTCTCACTTTTTTCCTCGGCATGGCGGCTGCGGCGGCAAGACCTA TCTATCCCCAAATCACTTACCCCGCATCCTCTCCGCCGTCATGTCCATGC GCGTTTCTGCCCTCTTTTGACTCCATTTCGTCCCGGTTTCGGCGGTTTCG CCCTTCACTGCAACAGCATCACCAATAAGGAAATGTCGACTCCGTCCCTG TGGCCGCTCAACTTCGGCTGGCCGTGCCTTGAGGGGAGCTCTGACTTCGC CAACCCAACCGACGACGACTTTGTGAGTTTCAGAAAAGAGGGAAACGTAA CGGTTTTGCGGGTTCAACATTTTGCCGGGGGTGGGTTCGATTTCGGCTGG CCGAGCCTCGAAGGGGGAAATCAGACGTCGAGCGTCGAAGGGCCAAATCA GACGTTAACAGATGCCGTTCGACTTGGCGGGGAACGGCCGTTTTGAACGA ACATGCCGTCTCGCCATTTGTCGGGACGGAATTATTTACGCGTCCTGCAA TTGTTGTGTCCTGCCGCCCCGGCACTAACCCTTCAACGCTCTCCGTCCTG CTTGCCCGCTGCCCGCTGCTCTGCCACTGCCGGCAATATTGCTCTCCCCG CCTGCCATCCTTCATTCTTCTGCTGGCCGTTCGCCCACCGCCCCGGCTTG GATCTGCCATCTGCCCGCAGAAATGGCTCAAAAACACGTGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig800:3894..8184+

>mRNA_P-wetherbeei_contig800.1.1 ID=mRNA_P-wetherbeei_contig800.1.1|Name=mRNA_P-wetherbeei_contig800.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1077bp|location=Sequence derived from alignment at P-wetherbeei_contig800:3894..8184+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGGATTGTCAGCGAGGAGGAAGAAGAGGCGCTAGCAGCATCACCAG
CACCAACAGCATGCGGGCTATAGTCGTTGGCGCAGGGCTTGGCCTCGCCG
CGGTCCTTCGCGGTGCCGAAGCCGCAAATCCCAAAATGCTCAACCCGTCC
TTTGTCTTTGACAGCTACAACATCCCCGCGACGGGAACTCGCCGTATGGA
GACGCGATTTTCTCCTTGTAGCGATCACACCTTCGTAATCGATAAATCGG
GGAACTTCATCGCCTTCTCAGACGTGGCGGACGAAAAGACTTTTGAGTTC
TCCATCGAAAAGGCCGTGTACGAGCTCGCCGACCACGGCCCGACGGGCAT
GCTGGTCCATCCCGACTTCCCCAAGACGCCGTCCATCTTCGTCTTCTACA
CCGCCGACCCCACCGACAAGTGGGACGACAAGTGCCCACTCAAGCCGGAC
GCTGACGGCTTCTCTTACTGCGACTCCAAGCAGCGGCTGGAGCGCTTTGA
CCTCAAGGTGACCATGACCGGCACCCGCTGCACCAACTTCGCGCTCGTGG
ACAGCCAGGTCCTGATCGAGGACTGGTGCTCGACGTCTTCCTCCCACGGC
AACGGCAACATTGAGTGGTGGAATGGCGCCAACATGATTCTGACCTCTGG
CGACGGCGGCATGCCGTCGACAAGCGACTACGGGCAGAAGCAGGGCGACG
TGTGCTTCAACGCGGCCAAGAAGCTTCCGCAGGGCCGCTGGCGCTCGCTA
CGCATGGACGGTTTCCTACAGGGCAAGCTTTTGCTGATCAAGGCGGCGTC
GCTCCTAAAGAATTCGGGCCTCACCCTCAACAACGATTACAACATTGTCG
CGAGCGGCCTCCGGCAGCCGTACGTCAACACGGTGAACCCGTGGACGGGC
GACGTTCTGATCGGCGACGTCGGCAGCAAAATCTGGGAAGAGGTCAACGT
CATCACCAATAAGGAAATGTCGACTCCGTCCCTGTGGCCGCTCAACTTCG
GCTGGCCGTGCCTTGAGGGGAGCTCTGACTTCGCCAACCCAACCGACGAC
GACTTTAAATGGCTCAAAAACACGTGC
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