mRNA_P-wetherbeei_contig800.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: A0A4D9D361_9STRA (GSDH domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D361_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.990e-39 Identity = 94/267 (35.21%), Postives = 143/267 (53.56%), Query Frame = 3
Query: 510 IEKAVYELADHGPTGMLVHPDFPKTPSIFVFYTAD-PTDKWDDKCP-------LKPDADGFSYCDSKQRLERFDLKVTMTGTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDVCFNAAKKLPQGRWRSLRMDGFLQGKLLLIKAASLLKNSGLTLNNDYNIVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPLNFGWPCLEGSSDFANPTDDDFKWLK-NTC 1283
I + VY DHG VHPDFP+ P +F+ Y+A+ P W+D C + AD YC + ++ R + T A D++ L DWC+++ +H G + + +MI +GDG D+GQ Q D C + QG + S + DG+L+GK ++IK SLLK+ L N DY +++ G R P+ +T++P TGDV GDVGS +WEE+N I N + +NFGWPC+EG + ++ + K + +TC
Sbjct: 91 INEEVYSWWDHGLLSAAVHPDFPQKPYLFIAYSAEYPGKPWNDNCEVDYRLSHMTTPADTRPYCKTMAKIIRLTVDEDFTT------ATFDAE-LFHDWCTSTYTHHVGTMNFLEDGSMIYGAGDGSHFQGIDHGQPQ-DECTDPQGPKDQGVFLSQK-DGYLRGKFIVIKPESLLKDEHLQANVDYTVISRGARNPFRSTIDPMTGDVFFGDVGSSVWEEINHIPNP---LDLDYVMNFGWPCIEGENSVSDIFQNFLKMNRLDTC 345
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: A0A4D9D6I0_9STRA (GSDH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6I0_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.280e-36 Identity = 93/267 (34.83%), Postives = 137/267 (51.31%), Query Frame = 3
Query: 450 KSGNFIAFSDVADEKTFEFSIEKAVYELADHGPTGMLVHPDFPKTPSIFVFYTAD-PTDKWDDKCPLKPDA-------DGFSYCDSKQRLERFDLKVTMTGTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDVCFNAAKKLPQGRWRSLRMDGFLQGKLLLIKAASLLKNSGLTLNNDYNIVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPLNFGWPCLEG 1226
KS +++ D+ D+ VY DHG HP FP+ P +++ Y+++ P + W D+C P D YC + +L R + +T + Q L +DWCS++ +H G I W +MI +GDG D+GQ Q D C + QG + + + D +L+GK L I A++LKN L DY+ ++ G R P+ TV+P TGD+ IGDVGS +WEE+N I N +S P NFGWPC+EG
Sbjct: 71 KSQDYVTLLDIKDQ----------VYSWWDHGLLSASFHPQFPQQPYLYIAYSSESPGNPWQDQCVPDPKKVAMTNPPDTRPYCKTMAKLVRLKVDPDLTSAKF-------DQELFQDWCSSTYTHHVGTINWLEDGSMIYGAGDGSHFQGLDHGQPQ-DECTDPKGPKDQGVFTAQK-DAYLRGKFLHISPAAVLKNGYLQGGQDYSQISKGSRNPFRTTVDPKTGDIYIGDVGSSVWEEINRIPNP-LSADYRKP-NFGWPCVEG 316
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: A0A0G4IYG1_PLABS (PKD domain-containing protein (Fragment) n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYG1_PLABS) HSP 1 Score: 151 bits (381), Expect = 6.510e-36 Identity = 103/283 (36.40%), Postives = 142/283 (50.18%), Query Frame = 3
Query: 438 FVIDKSGNFIAFSDV-ADEKTFEFSIEKA---VYELADHGPTGMLVHPDFPKTPSIFVFYTADPTDKWD-------DK--CPLKPDADGFSYCDSKQRLERFDLKVTMT-GTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDVCFNAAKKLPQGRWRSLRMDGFLQGKLLLIKAASLLKNSGLTL-NNDYNIVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPLNFGWPCLEGSSDFA 1241
F+ +K G + + ADE F + ++ Y D G G+ V ++P P ++VFY+ + D DK CP AD SYC + L R + V GT QVL+ DWCS S SH G++ W + LT+GDG D G D C+N QG +RS M+ +LQGKLL SL+ + L+L NND+ I+A GLR PY TV+P+TGD+ +GDVGS WEE+N + N + NFGWPC EG+ +
Sbjct: 60 FLTEKDGRIRLYPSIEADENDFVYVFDQEYEKTYTWWDRGMLGVAVDQNYPDAPFLWVFYSVNRLPGLDGPDFNLFDKTTCP----ADRHSYCGTAAHLVRVRVDVPRRKGTI--------EQVLVSDWCSASGSHHIGDLVWAPDGGLYLTAGDGASFDFGDVGVPT-DRCYNHDDPRLQGSFRSQHME-YLQGKLLYFSKESLMADRVLSLKNNDFKILAKGLRNPYRFTVDPYTGDLYVGDVGSDYWEEINRVPNPLDPANAGKMPNFGWPCYEGNYPYV 328
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: A0A3P3Y1N1_PLABS (PKD domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y1N1_PLABS) HSP 1 Score: 151 bits (381), Expect = 7.080e-36 Identity = 103/283 (36.40%), Postives = 142/283 (50.18%), Query Frame = 3
Query: 438 FVIDKSGNFIAFSDV-ADEKTFEFSIEKA---VYELADHGPTGMLVHPDFPKTPSIFVFYTADPTDKWD-------DK--CPLKPDADGFSYCDSKQRLERFDLKVTMT-GTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDVCFNAAKKLPQGRWRSLRMDGFLQGKLLLIKAASLLKNSGLTL-NNDYNIVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPLNFGWPCLEGSSDFA 1241
F+ +K G + + ADE F + ++ Y D G G+ V ++P P ++VFY+ + D DK CP AD SYC + L R + V GT QVL+ DWCS S SH G++ W + LT+GDG D G D C+N QG +RS M+ +LQGKLL SL+ + L+L NND+ I+A GLR PY TV+P+TGD+ +GDVGS WEE+N + N + NFGWPC EG+ +
Sbjct: 60 FLTEKDGRIRLYPSIEADENDFVYVFDQEYEKTYTWWDRGMLGVAVDQNYPDAPFLWVFYSVNRLPGLDGPDFNLFDKTTCP----ADRHSYCGTAAHLVRVRVDVPRRKGTI--------EQVLVSDWCSASGSHHIGDLVWAPDGGLYLTAGDGASFDFGDVGVPT-DRCYNHDDPRLQGSFRSQHME-YLQGKLLYFSKESLMADRVLSLKNNDFKILAKGLRNPYRFTVDPYTGDLYVGDVGSDYWEEINRVPNPLDPANAGKMPNFGWPCYEGNYPYV 328
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: A0A8J4A6R5_9ACTN (PKD domain-containing protein n=1 Tax=Virgisporangium ochraceum TaxID=65505 RepID=A0A8J4A6R5_9ACTN) HSP 1 Score: 117 bits (292), Expect = 2.090e-24 Identity = 94/284 (33.10%), Postives = 124/284 (43.66%), Query Frame = 3
Query: 438 FVIDKSGNFIAFSDVADEKTFEFS-IEKAVYELADHGPTGMLVHPDFPKTPSIFVFYTADP-----TDKWDDKCPLKPDADGFSYCDSKQRLERFDLKV-TMTGTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDV----CFNAAKKLPQGRWRSLRMDGF---LQGKLLLIK-----AASLLKNSGLTLNNDYNIVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPLNFGWPCLEGSS 1232
FV +K G F D+AD F+ + V+ D G GM++ P+FP P ++V YT D W+D C D C RL R TMTGT QVL+ DWC SH G+I + + + +GDG + DYGQ C + A + R + LR G L G LL + AA NS + IVA GLR PY T+ P T + I D G WEEVN + + P+ NFGWPC EG++
Sbjct: 60 FVAEKGGRIKVFDDLADTTPTVFADLSANVHNQWDRGLLGMVLAPNFPTNPYVYVLYTYDAPPGQVAPVWNDVCANANDG----RCVVTGRLSRLQANGNTMTGTE---------QVLLHDWCQQFPSHSIGDIAFGADGMLYVAAGDGASFNAVDYGQLPSGAPTNPCGDPANEGGALRSQDLRTPGDETQLDGTLLRLDPATGAAAPGNPNSASADPDTRRIVAHGLRNPYRITMRPGTNETWISDTGWNTWEEVNRVPD-----PTTGVTNFGWPCWEGNA 325
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: A0A7W7WR06_9ACTN (Glucose/arabinose dehydrogenase n=1 Tax=Micromonospora polyrhachis TaxID=1282883 RepID=A0A7W7WR06_9ACTN) HSP 1 Score: 110 bits (275), Expect = 2.850e-22 Identity = 104/337 (30.86%), Postives = 145/337 (43.03%), Query Frame = 3
Query: 315 RGAEAANPKMLNPSFVFDSYNIPATGTRRMETRFSPCSDHTFVIDKSGNFIAFSDVADEKTFEFS-IEKAVYELADHGPTGMLVHPDFPKTPSIFVFYTAD-------PTDKWDDKCPLKPDADGFSYCDSKQRLERF--DLKVTMTGTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQ------GD--VCFNAAKKLPQGRWRSLRMDGF--------LQGKLLLIK--AASLLKNSGLTLNNDYN---IVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPL-NFGWPCLEGS 1229
R A+A P VF TR + FSP FV K+G F ++D F+ + VY+ D G G+ + PDFP P ++V Y+ D PT ++D C C + R+ R D V MTGT QVL+ DWC SH G++ + + +T GDG + +DYGQ GD A P +LR L G L+ I + L ++ + D N IVA GLR PY P T +V +GDVG ++WEE+N IT+ P+ P+ N+GWPC EG+
Sbjct: 20 RPAQATPPAGFTQQVVFSGL------TRPTKLVFSP-DGRIFVGQKNGIIKVFDGLSDTTATVFADLRSNVYDFEDLGLIGLALAPDFPADPWVYVSYSYDGMIGGSAPT--YNDACAA------IGSCPASSRVSRLRADGNV-MTGTE---------QVLLHDWCQQIESHSIGDLAFGPDGALYVTGGDGASGTFTDYGQAGNPTNPCGDPPAPIGGAMTPPTAEGGALRSQDVRTPADPTGLSGTLIRINPTTGAALPDNPWASSADANTRRIVAYGLRNPYRWAFRPGTSEVWLGDVGWRVWEEINRITD-----PAGGPVRNYGWPCYEGN 326
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: UPI001945A094 (PQQ-dependent sugar dehydrogenase n=1 Tax=Plantactinospora mayteni TaxID=566021 RepID=UPI001945A094) HSP 1 Score: 104 bits (259), Expect = 1.160e-20 Identity = 98/339 (28.91%), Postives = 144/339 (42.48%), Query Frame = 3
Query: 321 AEAANPKMLNPSFVFDSYNIPATGTRRMETRFSPCSDHTFVIDKSGNFIAFSDVADEKTFEFS-IEKAVYELADHGPTGMLVHPDFP-KTPSIFVFYTAD-------PTDKWDDKCPLKPDADGFSYCDSKQRLERFDLKVTMTGTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQ--KQGDVC------FNAAKKLPQGRWRSLRMDGF--------LQGKLLLIKAAS--LLKNSGLTLNNDYN---IVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPL-NFGWPCLEGSSDFAN 1244
A AA P VF P + FSP FV +KSG F +AD F+ + + V++ +D G G+ + P FP + P ++V YT D PT +DD+C C R+ R + N LV+ +VL+ DWC S +H G+I + + +++ GDG DYGQ + C A P +LR L G L+ + + ++ L + D N IVA GLR P+ P TG+V +GDVG + WEE++ + N P P+ N+GWPC EG+ N
Sbjct: 28 ARAALPPGFTDQVVFAGLTEPT------KVAFSP-DGRVFVAEKSGFVKVFDSLADSTPTVFADLRRQVFDYSDLGLVGLALPPGFPTRNPWVYVSYTYDAPIGGTAPT--YDDRCSTS------DRCLVSARVSRLVIS---------NRQLVE-RVLLNDWCQQSDTHSIGDIAFASDGALLVAGGDGASGDVVDYGQLGNPTNPCGDPPAPVGGAMTPPTAEGGALRAQDVRTPADPTGLSGTLVRVHETTGKAPADNPLVASPDLNTRRIVAYGLRNPFRFVFRPGTGEVWLGDVGFRTWEEIDRLVN-----PLASPVPNYGWPCYEGAGQQPN 336
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: A0A1H3RCP1_9ACTN (Alpha-amylase n=1 Tax=Asanoa ishikariensis TaxID=137265 RepID=A0A1H3RCP1_9ACTN) HSP 1 Score: 99.8 bits (247), Expect = 1.140e-18 Identity = 85/293 (29.01%), Postives = 129/293 (44.03%), Query Frame = 3
Query: 441 VIDKSGNFIAFSDVADEKTFEFS-IEKAVYELADHGPTGMLVHPDFPKTPSIFVFYTAD-------PTDKWDDKCPLKPDADGFSYCDSKQRLERFDLKVT-MTGTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDVCFNAAKKLPQG-------------RWRSLRMDGF---LQGKLLLIKAAS--LLKNSGLTLNNDYN---IVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPL-NFGWPCLEG 1226
+ K+G + ++D F+ + V+ D G M V PDFP +P ++V YT D PT ++D+C + D C R+ R + MTG+ QVL+ DWC +H GN+ + + ++ GDG PS DYGQ+ P G R + +R G L G + + A+ L ++ + ++D N I+A GLR PY P T +V GDVG ++WEE++ + P P+ NFGWPC EG
Sbjct: 64 IAQKNGVIKIYDSLSDTTPTVFADLSSEVFTYGDLGLLSMAVPPDFPDSPYVYVSYTYDGPIGGSAPT--YNDQCAVLGD------CVVSNRVSRLRIAGNVMTGSE---------QVLLHDWCHVYETHAVGNVGFGPDGALYVSGGDGASPSFPDYGQRGAVTNPCGDPGAPVGGTMTPPTAEGGALRSQDVRTPGDPTGLSGTFIRVDPATGAALPDNPMAGSSDPNTRRILAYGLRNPYRWVFRPGTSEVWFGDVGWRLWEEID-----RLPDPLNGPVENFGWPCYEG 334
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: UPI001A615B4B (PQQ-dependent sugar dehydrogenase n=1 Tax=Asanoa iriomotensis TaxID=234613 RepID=UPI001A615B4B) HSP 1 Score: 99.4 bits (246), Expect = 1.530e-18 Identity = 86/293 (29.35%), Postives = 130/293 (44.37%), Query Frame = 3
Query: 441 VIDKSGNFIAFSDVADEKTFEFS-IEKAVYELADHGPTGMLVHPDFPKTPSIFVFYTAD-------PTDKWDDKCPLKPDADGFSYCDSKQRLERFDLKV-TMTGTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDVCFNAAKKLPQG-------------RWRSLRMDGF---LQGKLLLIK---AASLLKN--SGLTLNNDYNIVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPL-NFGWPCLEG 1226
+ K+G + +++D F+ + + V+ D G G+ V PDFP TP ++V YT D PT ++D+C + D C R+ R + MTG+ QVL+ DWC +H G+I + + ++ GDG P+ DYGQ+ P G R + +R G L G + + A+L N +G + N I+A GLR PY P T +V GDVG ++WEE++ + P P+ NFGWPC EG
Sbjct: 65 IAQKNGVIKIYDNLSDTTPTVFADLSQQVFTYGDLGLLGLAVPPDFPATPWVYVSYTYDGQIGGSAPT--YNDRCAVLGD------CIVSNRVSRLRIAGDVMTGSE---------QVLLHDWCHLYETHAVGDIGFGPDGALYVSGGDGASPAFPDYGQRGTVTNACGDPGAPVGGTMTPPTAEGGALRSQDVRTPGDPTGLSGTFIRVDPNTGAALPDNPMAGSSDPNTRRILAYGLRNPYRWAFRPGTSEVWFGDVGWRLWEEID-----RLPDPLNSPVENFGWPCYEG 335
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Match: A0A7X0VBM4_9ACTN (PQQ-dependent sugar dehydrogenase n=2 Tax=Nocardioides luti TaxID=2761101 RepID=A0A7X0VBM4_9ACTN) HSP 1 Score: 98.2 bits (243), Expect = 2.910e-18 Identity = 87/294 (29.59%), Postives = 132/294 (44.90%), Query Frame = 3
Query: 414 FSPCSDHTFVIDKSGNFIAFSDVADEKTFEFS-IEKAVYELADHGPTGMLVHPDFPKTPSIFVFYTAD-------PTDKWD------DKCPLKPDADGFSYCDSKQRLERFDLKVTMTGTRCTNFALVDSQVLIEDWCSTSSSHGNGNIEWWNGANMILTSGDGGMPSTSDYGQKQGDVCFNAAKKLPQGRWRSLRMDGF---LQGKLLLIKAASLLKNSG--LTLNNDYN---IVASGLRQPYVNTVNPWTGDVLIGDVGSKIWEEVNVITNKEMSTPSLWPLNFGWPCLEGS 1229
F+P FV +K+G F + D F+ + V D G G+ + P+FP P ++V Y + P +W D CP P AD C R+ R +T G + T + QVL+ED+C SH G + + + ++G+G + DYGQ G+ C + + R + LR G L G ++ I + L G L + D N I+A G R P+ P T V++GDVGS +EE+N + +TP ++FGWPC EG+
Sbjct: 56 FAP-DGRVFVAEKTGVIKVFDGLDDTDADVFADLNVNVENFYDRGLLGLTLDPEFPARPYVYVSYAYNHVLGDPAPAPRWGEPGQYYDDCPDPPGADDQG-CVVSGRVSR----LTADGNQVTG----EEQVLVEDYCLQFPSHATGTVAFGPDGALYASAGEGANYNYEDYGQT-GNPCGDPVDEGGALRAQDLRTGGDPVGLNGTVIRIDPDTGLGAPGNPLASSPDLNARRIIADGFRNPFRFAFRPGTSQVVVGDVGSFQYEELNTLPT---TTPDQ-VVDFGWPCYEGA 334 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig800.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig800.1.1 >prot_P-wetherbeei_contig800.1.1 ID=prot_P-wetherbeei_contig800.1.1|Name=mRNA_P-wetherbeei_contig800.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=359bp MRDCQRGGRRGASSITSTNSMRAIVVGAGLGLAAVLRGAEAANPKMLNPSback to top mRNA from alignment at P-wetherbeei_contig800:3894..8184+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig800.1.1 ID=mRNA_P-wetherbeei_contig800.1.1|Name=mRNA_P-wetherbeei_contig800.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4291bp|location=Sequence derived from alignment at P-wetherbeei_contig800:3894..8184+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig800:3894..8184+ >mRNA_P-wetherbeei_contig800.1.1 ID=mRNA_P-wetherbeei_contig800.1.1|Name=mRNA_P-wetherbeei_contig800.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1077bp|location=Sequence derived from alignment at P-wetherbeei_contig800:3894..8184+ (Phaeothamnion wetherbeei SAG_119_79)back to top |