mRNA_P-wetherbeei_contig7887.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7887.3.1 vs. uniprot
Match: A0A1F2ZZW9_9PROT (DUF4440 domain-containing protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1F2ZZW9_9PROT) HSP 1 Score: 280 bits (715), Expect = 3.740e-95 Identity = 133/143 (93.01%), Postives = 136/143 (95.10%), Query Frame = 1
Query: 13 MTAELRALNARFIHNFITNDVPSHDAILHKDFICITPAGGRVGRADYLKAWATGFDAERIPYFDYRDELIHVFGATALLRSTNKSIRVKDGVESIGMTMYTDAYVHQDGAWKCIQAQITPVAPANYPPDETIVKKYVRGKLQP 441
MTAELRALNARFIHNFITNDVPSHDAILHKDFICITP GGRVGRADYLKAWATGFD ERIPYFDYRDELIHVFGATALLRSTNKSIR+ DGVE+ GMTMYTD YVHQDGAWKCIQAQITPVAPANYPPDETIVKKYV+GK P
Sbjct: 1 MTAELRALNARFIHNFITNDVPSHDAILHKDFICITPTGGRVGRADYLKAWATGFDPERIPYFDYRDELIHVFGATALLRSTNKSIRMVDGVETTGMTMYTDTYVHQDGAWKCIQAQITPVAPANYPPDETIVKKYVKGKALP 143
BLAST of mRNA_P-wetherbeei_contig7887.3.1 vs. uniprot
Match: A0A521KX29_9HYPH (Nuclear transport factor 2 family protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521KX29_9HYPH) HSP 1 Score: 265 bits (677), Expect = 3.280e-89 Identity = 127/146 (86.99%), Postives = 135/146 (92.47%), Query Frame = 1
Query: 1 RRLAMTAELRALNARFIHNFITNDVPSHDAILHKDFICITPAGGRVGRADYLKAWATGFDAERIPYFDYRDELIHVFGATALLRSTNKSIRVKDGVESIGMTMYTDAYVHQDGAWKCIQAQITPVAPANYPPDETIVKKYVRGKLQ 438
RRLAMTAELRALNARFIHNFITNDVPSHDAILH+ FICITPAG RVGRADYLKAWATGFD +RIPYFDYRDE I +FG TALLRSTNKSIR+ DGVE+ GMTMYTD YV QDGAWKCIQAQITPVAPANYPPDETIV+KYVRG+ +
Sbjct: 7 RRLAMTAELRALNARFIHNFITNDVPSHDAILHEGFICITPAGARVGRADYLKAWATGFDPDRIPYFDYRDEKIDLFGDTALLRSTNKSIRMLDGVETTGMTMYTDIYVRQDGAWKCIQAQITPVAPANYPPDETIVRKYVRGRAE 152
BLAST of mRNA_P-wetherbeei_contig7887.3.1 vs. uniprot
Match: UPI001C21976E (DUF4440 domain-containing protein n=1 Tax=Reyranella sp. MMS21-HV4-11 TaxID=2849149 RepID=UPI001C21976E) HSP 1 Score: 246 bits (629), Expect = 4.860e-82 Identity = 117/143 (81.82%), Postives = 125/143 (87.41%), Query Frame = 1
Query: 13 MTAELRALNARFIHNFITNDVPSHDAILHKDFICITPAGGRVGRADYLKAWATGFDAERIPYFDYRDELIHVFGATALLRSTNKSIRVKDGVESIGMTMYTDAYVHQDGAWKCIQAQITPVAPANYPPDETIVKKYVRGKLQP 441
MTAELRALNARFIHNFITNDVP HDAILH+DFICI+PAG R+ RADYL+ WA GFD RIPYFDYRDE I VFG TALLRSTNKS+RV+DGVE GMTMYTD YV +DG WKCIQAQITPV PA+YPPDETIVKKYVRG QP
Sbjct: 1 MTAELRALNARFIHNFITNDVPGHDAILHEDFICISPAGLRISRADYLEEWADGFDPARIPYFDYRDEKIDVFGDTALLRSTNKSVRVRDGVEITGMTMYTDVYVRRDGVWKCIQAQITPVQPAHYPPDETIVKKYVRGMAQP 143
BLAST of mRNA_P-wetherbeei_contig7887.3.1 vs. uniprot
Match: UPI001E5672B3 (nuclear transport factor 2 family protein n=1 Tax=Reyranella aquatilis TaxID=2035356 RepID=UPI001E5672B3) HSP 1 Score: 245 bits (626), Expect = 1.390e-81 Identity = 118/143 (82.52%), Postives = 124/143 (86.71%), Query Frame = 1
Query: 13 MTAELRALNARFIHNFITNDVPSHDAILHKDFICITPAGGRVGRADYLKAWATGFDAERIPYFDYRDELIHVFGATALLRSTNKSIRVKDGVESIGMTMYTDAYVHQDGAWKCIQAQITPVAPANYPPDETIVKKYVRGKLQP 441
MTAELRALNARFIHNFITNDV HDAILH FICI+PAG RV RADYL WA GFDAERIPYFDYRDE I VFG TALLRSTNKS+R+KDGVE+ GMTMYTD YV QDG WKC+QAQITPV PA+YPPDETIVKKYVRG QP
Sbjct: 1 MTAELRALNARFIHNFITNDVAGHDAILHPAFICISPAGLRVSRADYLAEWAHGFDAERIPYFDYRDERIDVFGDTALLRSTNKSVRLKDGVETTGMTMYTDTYVRQDGTWKCVQAQITPVQPAHYPPDETIVKKYVRGMAQP 143
BLAST of mRNA_P-wetherbeei_contig7887.3.1 vs. uniprot
Match: A0A537MZQ3_9PROT (Nuclear transport factor 2 family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MZQ3_9PROT) HSP 1 Score: 241 bits (615), Expect = 6.610e-80 Identity = 113/142 (79.58%), Postives = 126/142 (88.73%), Query Frame = 1
Query: 13 MTAELRALNARFIHNFITNDVPSHDAILHKDFICITPAGGRVGRADYLKAWATGFDAERIPYFDYRDELIHVFGATALLRSTNKSIRVKDGVESIGMTMYTDAYVHQDGAWKCIQAQITPVAPANYPPDETIVKKYVRGKLQ 438
MT ELRALNARFIHNFITNDV SHDAILH DFICITP G RVGRA+YL+AWATGFDA RIPY+DYRDE I VFG TAL+RSTNK + KDGVE++GMTMYTD YV +DGAWKCIQAQITPVAPA+YPPD+TIV+KY++G Q
Sbjct: 1 MTDELRALNARFIHNFITNDVGSHDAILHPDFICITPTGARVGRANYLEAWATGFDAGRIPYYDYRDEKIDVFGDTALVRSTNKRVGSKDGVETVGMTMYTDIYVRRDGAWKCIQAQITPVAPAHYPPDDTIVRKYIKGHAQ 142
BLAST of mRNA_P-wetherbeei_contig7887.3.1 vs. uniprot
Match: A0A1H8NQL6_9PROT (DUF4440 domain-containing protein n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8NQL6_9PROT) HSP 1 Score: 235 bits (600), Expect = 1.280e-77 Identity = 110/142 (77.46%), Postives = 123/142 (86.62%), Query Frame = 1
Query: 13 MTAELRALNARFIHNFITNDVPSHDAILHKDFICITPAGGRVGRADYLKAWATGFDAERIPYFDYRDELIHVFGATALLRSTNKSIRVKDGVESIGMTMYTDAYVHQDGAWKCIQAQITPVAPANYPPDETIVKKYVRGKLQ 438
MTAELRALNARFI+NFITNDV HDAILH+ FICI P G RV RADYLKAWATGFDA RIPY+DYRDE I VFG TAL+RSTNK + +KDGVE++ MTMYTD YV GAWKC+QAQITPV PANYPPDETIV+KYV+G++Q
Sbjct: 1 MTAELRALNARFINNFITNDVAGHDAILHEGFICIAPTGARVSRADYLKAWATGFDAGRIPYYDYRDEKIDVFGDTALVRSTNKRVGLKDGVETVSMTMYTDIYVRDGGAWKCVQAQITPVQPANYPPDETIVRKYVKGEVQ 142
BLAST of mRNA_P-wetherbeei_contig7887.3.1 vs. uniprot
Match: A0A5C5T5C7_9HYPH (Nuclear transport factor 2 family protein n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5T5C7_9HYPH) HSP 1 Score: 200 bits (509), Expect = 1.100e-63 Identity = 94/139 (67.63%), Postives = 109/139 (78.42%), Query Frame = 1
Query: 22 ELRALNARFIHNFITNDVPSHDAILHKDFICITPAGGRVGRADYLKAWATGFDAERIPYFDYRDELIHVFGATALLRSTNKSIRVKDGVESIGMTMYTDAYVHQDGAWKCIQAQITPVAPANYPPDETIVKKYVRGKLQ 438
+LRALNA+FI+NF+TNDVPSHD + HKDF+CIT G RVGR+ YL WATGFD IPY+DYR E I VFG+TAL+RS NK VKDGVE+ MT YTD Y+H+ G W CIQAQ TPVAP NYP DETIVKK++RG Q
Sbjct: 9 QLRALNAQFINNFVTNDVPSHDRLTHKDFVCITSKGERVGRSTYLDRWATGFDPAVIPYWDYRGESISVFGSTALVRSVNKHTVVKDGVETTSMTAYTDTYIHEAGEWTCIQAQSTPVAPENYPGDETIVKKWIRGVPQ 147
BLAST of mRNA_P-wetherbeei_contig7887.3.1 vs. uniprot
Match: A0A7Z2PTF8_9BRAD (DUF4440 domain-containing protein n=3 Tax=Bradyrhizobium TaxID=374 RepID=A0A7Z2PTF8_9BRAD) HSP 1 Score: 191 bits (484), Expect = 9.700e-60 Identity = 94/140 (67.14%), Postives = 107/140 (76.43%), Query Frame = 1
Query: 22 ELRALNARFIHNFITNDVPSHDAILHKDFICITPAGGRVGRADYLKAWATGFDAERIPYFDYRDELIHVFGATALLRSTNKSIRVKDGVESIGMTMYTDAYVHQDGAWKCIQAQITPVAPANYPPDETIVKKYVRGKLQP 441
ELRALNARFIHNF+T+DVPSHDAILH FI I P G R RA YLK WAT FD + I Y+D RDELI V G AL+RSTNK IR +DG E GMT YTD Y+ ++GAWKCIQAQ+T VAP +YP D+TIV Y+ GKLQP
Sbjct: 16 ELRALNARFIHNFVTSDVPSHDAILHPSFINIWPTGQRWDRATYLKYWATAFDPDVIVYWDVRDELITVVGDVALVRSTNKYIRRRDGSEVTGMTTYTDTYLFENGAWKCIQAQLTAVAPEHYPADDTIVSVYIEGKLQP 155
BLAST of mRNA_P-wetherbeei_contig7887.3.1 vs. uniprot
Match: UPI001BA76A95 (DUF4440 domain-containing protein n=8 Tax=Bradyrhizobium TaxID=374 RepID=UPI001BA76A95) HSP 1 Score: 191 bits (484), Expect = 9.700e-60 Identity = 95/140 (67.86%), Postives = 105/140 (75.00%), Query Frame = 1
Query: 22 ELRALNARFIHNFITNDVPSHDAILHKDFICITPAGGRVGRADYLKAWATGFDAERIPYFDYRDELIHVFGATALLRSTNKSIRVKDGVESIGMTMYTDAYVHQDGAWKCIQAQITPVAPANYPPDETIVKKYVRGKLQP 441
ELRALNARFIHNF+TNDV SHDAILH FI I P G R RA YLK WAT FD + IPY+D RDELI V G AL+RSTNK+ R DG E GMTMYTD Y+ ++GAWKCIQAQI VAP YP D+TIV Y+ GKLQP
Sbjct: 16 ELRALNARFIHNFVTNDVASHDAILHPAFISIWPTGKRWDRATYLKYWATAFDPKLIPYWDVRDELITVIGDVALVRSTNKATRRSDGNEVTGMTMYTDTYLFENGAWKCIQAQIQAVAPEFYPADDTIVSVYIEGKLQP 155
BLAST of mRNA_P-wetherbeei_contig7887.3.1 vs. uniprot
Match: UPI001BADBFF7 (DUF4440 domain-containing protein n=1 Tax=Bradyrhizobium liaoningense TaxID=43992 RepID=UPI001BADBFF7) HSP 1 Score: 190 bits (483), Expect = 1.330e-59 Identity = 91/140 (65.00%), Postives = 108/140 (77.14%), Query Frame = 1
Query: 22 ELRALNARFIHNFITNDVPSHDAILHKDFICITPAGGRVGRADYLKAWATGFDAERIPYFDYRDELIHVFGATALLRSTNKSIRVKDGVESIGMTMYTDAYVHQDGAWKCIQAQITPVAPANYPPDETIVKKYVRGKLQP 441
ELRA+NARFIHNF+T+DV SHDA+LH DFI I P G R RA YLK WAT FD + I Y+D RDELI V G AL+RSTNK +R +DG + GMT YTD Y+ ++GAWKCIQAQ+TPVAP +YP D+TIV Y+ GKLQP
Sbjct: 15 ELRAINARFIHNFVTSDVASHDALLHPDFINIWPTGQRWDRASYLKYWATAFDPKIIIYWDVRDELITVIGDVALVRSTNKHVRRRDGKDVTGMTTYTDTYLFENGAWKCIQAQLTPVAPEHYPADDTIVSVYIEGKLQP 154 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7887.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7887.3.1 >prot_P-wetherbeei_contig7887.3.1 ID=prot_P-wetherbeei_contig7887.3.1|Name=mRNA_P-wetherbeei_contig7887.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp MTAELRALNARFIHNFITNDVPSHDAILHKDFICITPAGGRVGRADYLKAback to top mRNA from alignment at P-wetherbeei_contig7887:2384..2827+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7887.3.1 ID=mRNA_P-wetherbeei_contig7887.3.1|Name=mRNA_P-wetherbeei_contig7887.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig7887:2384..2827+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7887:2384..2827+ >mRNA_P-wetherbeei_contig7887.3.1 ID=mRNA_P-wetherbeei_contig7887.3.1|Name=mRNA_P-wetherbeei_contig7887.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig7887:2384..2827+ (Phaeothamnion wetherbeei SAG_119_79)back to top |