mRNA_P-wetherbeei_contig7800.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7800.1.1 vs. uniprot
Match: A0A3C0TS02_9PROT (DUF2244 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TS02_9PROT) HSP 1 Score: 246 bits (627), Expect = 1.500e-80 Identity = 123/174 (70.69%), Postives = 143/174 (82.18%), Query Frame = 1
Query: 22 ASRITPEISADSAAGRTAGGLHFDAVLYPHRSLGPRGFMTLMTCLTVFSFVAGLSFYLMGAWPVLGFFGLDVVLIYFAFRINFRSGRIYETVQLDDACLLIRRFLPDGRILSWNLQAYWAQVELIAATPSAPLLAVRSHGKYLVFGNFLTAEERKEFATALRKALARNRTHLYA 543
A+ + PEI+ + AAGRTAGGL FDAVLYP+R+LGP GF+ +M ++ SF AG +L GAWPV+GFFGLDV+LIY AFRINFR+GRIYETVQLDDA LLIRRFLPDGRILSWN Q+YWA+VELI + PLLAVRSHGKYLVFGNFLT EER FA ALR+AL+R R +YA
Sbjct: 11 ANPLLPEITEEGAAGRTAGGLQFDAVLYPNRALGPAGFLLVMAGVSGLSFFAGAMAWLAGAWPVMGFFGLDVLLIYIAFRINFRAGRIYETVQLDDASLLIRRFLPDGRILSWNFQSYWAKVELIERAQNLPLLAVRSHGKYLVFGNFLTGEERAAFAAALRQALSRQRAMVYA 184
BLAST of mRNA_P-wetherbeei_contig7800.1.1 vs. uniprot
Match: A0A353LPS6_9PROT (DUF2244 domain-containing protein n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LPS6_9PROT) HSP 1 Score: 197 bits (500), Expect = 2.070e-61 Identity = 94/145 (64.83%), Postives = 118/145 (81.38%), Query Frame = 1
Query: 82 LHFDAVLYPHRSLGPRGFMTLMTCLTVFSFVAGLSFYLMGAWPVLGFFGLDVVLIYFAFRINFRSGRIYETVQLDDACLLIRRFLPDGRILSWNLQAYWAQVELIAATPSAPLLAVRSHGKYLVFGNFLTAEERKEFATALRKAL 516
L+FDAVL+PH SLG RGF+ LM ++ SF AGL+F+LMGAWPV+GFFGLDV+LIY AFR++FR R+YETV+L D+ L IRR LP+G+++ W Q YWA+VELI PLLA+RSHGKYLVFG+FLTA+ER +FA ALR+AL
Sbjct: 9 LYFDAVLHPHASLGRRGFLALMLFVSGVSFTAGLAFFLMGAWPVVGFFGLDVLLIYIAFRVSFRRARLYETVELSDSELAIRRHLPNGQVVKWTFQPYWARVELIGKAIGGPLLAIRSHGKYLVFGSFLTADERSDFADALREAL 153
BLAST of mRNA_P-wetherbeei_contig7800.1.1 vs. uniprot
Match: A0A2A5ELP9_9HYPH (Uncharacterized protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5ELP9_9HYPH) HSP 1 Score: 163 bits (413), Expect = 3.200e-48 Identity = 84/149 (56.38%), Postives = 101/149 (67.79%), Query Frame = 1
Query: 82 LHFDAVLYPHRSLGPRGFMTLMTCLTVFSFVAGLSFYLMGAWPVLGFFGLDVVLIYFAFRINFRSGRIYETVQLDDACLLIRRFLPDGRILSWNLQAYWAQVELIAATPSAPLLAVRSHGKYLVFGNFLTAEERKEFATALRKALARNR 528
LHFDA L PHR+LG RGF+ +M + SFVAGL+F LMGAWPV GFFGLDV LIYFAFR N+RS R YETVQL DA L IR+ DG L+W + YWA+V +A+ SHG+ ++ G+FL EER +F ALR LAR R
Sbjct: 14 LHFDARLSPHRALGRRGFLIVMALVISVSFVAGLTFTLMGAWPVFGFFGLDVALIYFAFRHNYRSARAYETVQLSDAALKIRKVAADGSALAWRFEPYWARVSFDRQAEDEVKVAITSHGQQVIVGDFLAPEERIQFGDALRGELARFR 162
BLAST of mRNA_P-wetherbeei_contig7800.1.1 vs. uniprot
Match: A0A6N6T2Z5_9HYPH (DUF2244 domain-containing protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T2Z5_9HYPH) HSP 1 Score: 158 bits (400), Expect = 2.560e-46 Identity = 78/143 (54.55%), Postives = 100/143 (69.93%), Query Frame = 1
Query: 88 FDAVLYPHRSLGPRGFMTLMTCLTVFSFVAGLSFYLMGAWPVLGFFGLDVVLIYFAFRINFRSGRIYETVQLDDACLLIRRFLPDGRILSWNLQAYWAQVELIAATPSAPLLAVRSHGKYLVFGNFLTAEERKEFATALRKAL 516
F AVL PHRSLGPRGF+ M + SF++G+ FYLMGAWPV GFFGLDV+++Y AFR+N+R+GRIYETV L A L +RR P GR ++ YWA+V L L + SHG+ L FG FLT +ER++FA AL++AL
Sbjct: 15 FHAVLTPHRSLGPRGFLLFMAAIAGISFISGVVFYLMGAWPVSGFFGLDVLVVYIAFRLNYRAGRIYETVDLTPAALTLRRVHPSGRTEQFDCNPYWARVNLREWPDGRTDLRIASHGRELAFGRFLTDDERRDFAGALKQAL 157
BLAST of mRNA_P-wetherbeei_contig7800.1.1 vs. uniprot
Match: A0A1E3WB36_9HYPH (Uncharacterized protein n=1 Tax=Methyloceanibacter marginalis TaxID=1774971 RepID=A0A1E3WB36_9HYPH) HSP 1 Score: 156 bits (395), Expect = 1.600e-45 Identity = 77/151 (50.99%), Postives = 99/151 (65.56%), Query Frame = 1
Query: 64 GRTAGGLHFDAVLYPHRSLGPRGFMTLMTCLTVFSFVAGLSFYLMGAWPVLGFFGLDVVLIYFAFRINFRSGRIYETVQLDDACLLIRRFLPDGRILSWNLQAYWAQVELIAATPSAPLLAVRSHGKYLVFGNFLTAEERKEFATALRKAL 516
G G F AVL P+RSLGPRGF+ M ++ SF GL FYLMGAWPV+GF GLDV+L+Y AFR+NFR+ R+YETV L + L + R P GR SW YW ++ L L++ SHG+ LVF +FLT ER++FA AL++AL
Sbjct: 10 GAANGDPQFSAVLTPNRSLGPRGFLVFMAAISTASFATGLMFYLMGAWPVMGFMGLDVLLVYIAFRVNFRALRLYETVDLTEDALTVTRVAPSGRAQSWRFNPYWVRLNLDERVGRTSELSIASHGERLVFASFLTDPEREDFAGALKEAL 160
BLAST of mRNA_P-wetherbeei_contig7800.1.1 vs. uniprot
Match: A0A2E6QE90_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QE90_9PROT) HSP 1 Score: 155 bits (393), Expect = 3.640e-45 Identity = 78/147 (53.06%), Postives = 102/147 (69.39%), Query Frame = 1
Query: 88 FDAVLYPHRSLGPRGFMTLMTCLTVFSFVAGLSFYLMGAWPVLGFFGLDVVLIYFAFRINFRSGRIYETVQLDDACLLIRRFLPDGRILSWNLQAYWAQVELIAATPSAPLLAVRSHGKYLVFGNFLTAEERKEFATALRKALARNR 528
FDAVLYPHRSLG RGF M+ + S G F+LMGAWPV GF GLDV+LI+ AFR N+R R+ ETV+L L ++RFLPDGR+ +W+ Q YW +VE+ L++ SHG+ L+ G+FL+ EER +FA ALR+AL+R R
Sbjct: 20 FDAVLYPHRSLGRRGFRIFMSAVIAVSLALGGGFWLMGAWPVFGFMGLDVLLIFLAFRSNYRHARLSETVRLTREKLTVQRFLPDGRVRAWDFQPYWLRVEIDRPEEHDCQLSIASHGQKLIIGSFLSPEERLDFAKALREALSRCR 166
BLAST of mRNA_P-wetherbeei_contig7800.1.1 vs. uniprot
Match: UPI000B4B4156 (DUF2244 domain-containing protein n=1 Tax=Rhodomicrobium TaxID=1068 RepID=UPI000B4B4156) HSP 1 Score: 155 bits (391), Expect = 5.380e-45 Identity = 75/144 (52.08%), Postives = 103/144 (71.53%), Query Frame = 1
Query: 85 HFDAVLYPHRSLGPRGFMTLMTCLTVFSFVAGLSFYLMGAWPVLGFFGLDVVLIYFAFRINFRSGRIYETVQLDDACLLIRRFLPDGRILSWNLQAYWAQVELIAATPSAPLLAVRSHGKYLVFGNFLTAEERKEFATALRKAL 516
HF AVL PHRSLG +GF+TLM+ ++ SF+ G++FYL GAWPV GFFGLDV+L+Y AF++N+R+ R+YETV+L D L + R P GR SW+ YW ++EL +A L++RSHG+ L G FL+ +E++ FA AL AL
Sbjct: 12 HFSAVLLPHRSLGRKGFITLMSVISGVSFLTGIAFYLKGAWPVFGFFGLDVLLVYGAFKLNYRAARLYETVELTDEQLTVTRIHPSGRAESWSFNPYWVRLELEEIDNAANRLSLRSHGRELRIGTFLSDDEKRGFAHALGAAL 155
BLAST of mRNA_P-wetherbeei_contig7800.1.1 vs. uniprot
Match: A0A0A8JY85_9HYPH (Uncharacterized protein n=3 Tax=Methyloceanibacter TaxID=1484898 RepID=A0A0A8JY85_9HYPH) HSP 1 Score: 155 bits (391), Expect = 6.270e-45 Identity = 77/143 (53.85%), Postives = 98/143 (68.53%), Query Frame = 1
Query: 88 FDAVLYPHRSLGPRGFMTLMTCLTVFSFVAGLSFYLMGAWPVLGFFGLDVVLIYFAFRINFRSGRIYETVQLDDACLLIRRFLPDGRILSWNLQAYWAQVELIAATPSAPLLAVRSHGKYLVFGNFLTAEERKEFATALRKAL 516
F AVL PHRSLGP+GF+ M ++ SF GL F+LMGAWP+LGF GLDV+L+Y AFRINFR+ R+YETV L D L + R P+G+ SW YW +V + + L++ SHGK LVFG FLT ER++FA AL+ AL
Sbjct: 18 FRAVLTPHRSLGPKGFVIFMAAISAVSFGTGLMFFLMGAWPILGFMGLDVLLVYVAFRINFRALRVYETVALTDEALTVTRVAPNGKEQSWRFNPYWVRVRVEERVGLSSELSLASHGKRLVFGAFLTDPEREDFADALKAAL 160
BLAST of mRNA_P-wetherbeei_contig7800.1.1 vs. uniprot
Match: A0A6I0EGT3_HYPSQ (DUF2244 domain-containing protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EGT3_HYPSQ) HSP 1 Score: 155 bits (391), Expect = 8.500e-45 Identity = 80/147 (54.42%), Postives = 95/147 (64.63%), Query Frame = 1
Query: 88 FDAVLYPHRSLGPRGFMTLMTCLTVFSFVAGLSFYLMGAWPVLGFFGLDVVLIYFAFRINFRSGRIYETVQLDDACLLIRRFLPDGRILSWNLQAYWAQVELIAATPSAPLLAVRSHGKYLVFGNFLTAEERKEFATALRKALARNR 528
F AVLYPHRSLGPRGF+ LM + SF+ G+ F LMGAWPV GFFGLDVVLIY AFR+N+RSGRIYE V+L L + R P GR S+ YW +V L L + SHG F FLT +ER++F+ AL ALAR R
Sbjct: 30 FRAVLYPHRSLGPRGFLILMLAIGAVSFITGMVFLLMGAWPVFGFFGLDVVLIYIAFRLNYRSGRIYEMVELTREALTVTRVHPSGRPESFAFNPYWVRVHLAEGPQGRTDLRLASHGDEFAFARFLTDDERRDFSNALSGALARTR 176
BLAST of mRNA_P-wetherbeei_contig7800.1.1 vs. uniprot
Match: UPI0019940B4D (DUF2244 domain-containing protein n=1 Tax=Methyloceanibacter sp. TaxID=1965321 RepID=UPI0019940B4D) HSP 1 Score: 154 bits (390), Expect = 9.740e-45 Identity = 77/148 (52.03%), Postives = 99/148 (66.89%), Query Frame = 1
Query: 88 FDAVLYPHRSLGPRGFMTLMTCLTVFSFVAGLSFYLMGAWPVLGFFGLDVVLIYFAFRINFRSGRIYETVQLDDACLLIRRFLPDGRILSWNLQAYWAQVELIAATPSAPLLAVRSHGKYLVFGNFLTAEERKEFATALRKALARNRT 531
F AVL PHRSLGP+GFM LM + SF GL FYL+GAWPV+GF GLDV LIY AFR+NFR+ R YETV L L + R P G++ SW+ YW ++ L + L++ SHG+ LV +FL+ EER++FA+AL ALA R+
Sbjct: 19 FSAVLTPHRSLGPKGFMVLMAAVCAVSFATGLFFYLLGAWPVIGFMGLDVALIYVAFRLNFRALRRYETVDLTQDALTVTRVAPSGKLQSWSFNPYWVRISLAPRLGRSSELSLASHGRRLVLASFLSDEEREDFASALSAALASARS 166 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7800.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7800.1.1 >prot_P-wetherbeei_contig7800.1.1 ID=prot_P-wetherbeei_contig7800.1.1|Name=mRNA_P-wetherbeei_contig7800.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=182bp MNAHTNIASRITPEISADSAAGRTAGGLHFDAVLYPHRSLGPRGFMTLMTback to top mRNA from alignment at P-wetherbeei_contig7800:999..1544- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7800.1.1 ID=mRNA_P-wetherbeei_contig7800.1.1|Name=mRNA_P-wetherbeei_contig7800.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=546bp|location=Sequence derived from alignment at P-wetherbeei_contig7800:999..1544- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7800:999..1544- >mRNA_P-wetherbeei_contig7800.1.1 ID=mRNA_P-wetherbeei_contig7800.1.1|Name=mRNA_P-wetherbeei_contig7800.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=546bp|location=Sequence derived from alignment at P-wetherbeei_contig7800:999..1544- (Phaeothamnion wetherbeei SAG_119_79)back to top |