mRNA_P-wetherbeei_contig7686.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7686.1.1 vs. uniprot
Match: A0A024UKQ3_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKQ3_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.220e-25 Identity = 56/137 (40.88%), Postives = 75/137 (54.74%), Query Frame = 2
Query: 5 CRKCRRVLFGASQLEDHQPARHDFSKRKVGNLVVKAEVK*AFGIGVKFQHLSRPAALITQLKAGASKYACSSYFLAERALWMGDMGDVEGKIVCATASCGARLGSYKWAGSQCSCGTWVTPAIQITGSRVDERLPMA 415
CR CR +LF + L +H+P RH S+RK + + K GA + CSSYFL++ WM + EGK+ C A C +RLGS+ W+GSQCSCGTWVTP++Q T SRVD ++ MA
Sbjct: 47 CRMCRALLFTSDDLMEHEPQRHQISQRKK----------------------------LKEAKLGAVE--CSSYFLSDTKEWMDEASLAEGKLFCPVAKCNSRLGSFGWSGSQCSCGTWVTPSVQFTKSRVDVKVKMA 153
BLAST of mRNA_P-wetherbeei_contig7686.1.1 vs. uniprot
Match: D0N5N4_PHYIT (C2H2-type domain-containing protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0N5N4_PHYIT) HSP 1 Score: 107 bits (267), Expect = 1.230e-25 Identity = 62/151 (41.06%), Postives = 79/151 (52.32%), Query Frame = 2
Query: 2 ACRKCRRVLFGASQLEDHQPARHDFSKRKVGNLVVKAEVK*AFGIGVKFQHLSRPAALITQLKAGASKYACSSYFLAERALWMGDMGDVEGKIVCATASCGARLGSYKWAGSQCSCGTWVTPAIQITGSRVD-----ERLPMASGVDTPGA 439
AC+KCR VLF + QL H+P +H S R+ K + L ++ ACSSYFL E WM + EGKI C T C +RLG+ +W+GSQCSCGTWVTP+I+IT SRVD L + +GV P A
Sbjct: 18 ACKKCRSVLFKSDQLTPHEPEQHQISTRR------------------KLKDLKHQV---------SAHVACSSYFLEETLPWMDEALLAEGKIHCPTLKCQSRLGALQWSGSQCSCGTWVTPSIKITKSRVDAVFKQSNLNIVTGVGLPNA 141
BLAST of mRNA_P-wetherbeei_contig7686.1.1 vs. uniprot
Match: H3GIL9_PHYRM (C2H2-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIL9_PHYRM) HSP 1 Score: 107 bits (267), Expect = 1.460e-25 Identity = 64/150 (42.67%), Postives = 82/150 (54.67%), Query Frame = 2
Query: 2 ACRKCRRVLFGASQLEDHQPARHDFS-KRKVGNLVVKAEVK*AFGIGVKFQHLSRPAALITQLKAGASKYACSSYFLAERALWMGDMGDVEGKIVCATASCGARLGSYKWAGSQCSCGTWVTPAIQITGSRVDERLPMAS-----GVDTP 433
AC+KCR +LF + QL H+P RH S +RK+ +L Q + P CSSYFL E WM + EGKI C TA C +RLG+ +W+GSQCSCGTWVTP+I+IT SRVD LP ++ GV+ P
Sbjct: 29 ACKKCRCMLFTSEQLAPHEPERHQISTRRKLKDLK---------------QQVGGPV-------------DCSSYFLDETLPWMDEALLAEGKIHCPTAKCQSRLGALQWSGSQCSCGTWVTPSIKITKSRVDPVLPQSNVKIVTGVELP 150
BLAST of mRNA_P-wetherbeei_contig7686.1.1 vs. uniprot
Match: W4G7N2_9STRA (C2H2-type domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7N2_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.110e-25 Identity = 62/163 (38.04%), Postives = 80/163 (49.08%), Query Frame = 2
Query: 5 CRKCRRVLFGASQLEDHQPARHDFSKRKVGNLVVKAEVK*AFGIGVKFQHLSRPAALITQLKAGASKYACSSYFLAERALWMGDMGDVEGKIVCATASCGARLGSYKWAGSQCSCGTWVTPAIQITGSRVDERLPM-------------ASGVDTPGAVVHAS 454
CR CR +LF + L H+P +H S+RK + + K GA CSS+FL + WM + EGK++C A C ARLGS+ W+GSQCSCGTWVTP++Q T SRVD +L M + V P AVV AS
Sbjct: 13 CRMCRVLLFTSDDLLQHEPQKHQISQRKK----------------------------LKESKLGAVD--CSSFFLVDTKEWMDEASLAEGKLLCPVAKCNARLGSFGWSGSQCSCGTWVTPSVQFTKSRVDVKLKMNIQAVYVPVVESAVAAVGAPAAVVEAS 145
BLAST of mRNA_P-wetherbeei_contig7686.1.1 vs. uniprot
Match: A0A6G0X4R1_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X4R1_9STRA) HSP 1 Score: 106 bits (264), Expect = 3.170e-25 Identity = 63/167 (37.72%), Postives = 84/167 (50.30%), Query Frame = 2
Query: 5 CRKCRRVLFGASQLEDHQPARHDFSKRKVGNLVVKAEVK*AFGIGVKFQHLSRPAALITQLKAGASKYA-CSSYFLAERALWMGDMGDVEGKIVCATASCGARLGSYKWAGSQCSCGTWVTPAIQITGSRVDERLPM-ASGVDTPGAVVHASVLKTERLGNEKDATK 499
CR CR LF + L +H+P +H S RK +LK G C+S+FLAE WM + EGK+ C A C +RLGS+ W+GSQCSCGTWVTP+IQIT SRVD ++ M V P V+ +V TE + ++T+
Sbjct: 12 CRMCRTKLFTSDDLMEHEPQKHQISTRK-------------------------------KLKEGKIGIVDCNSFFLAETKEWMDEAHLAEGKLFCPLAKCNSRLGSFDWSGSQCSCGTWVTPSIQITKSRVDPKIKMHIPSVFVP--VIAPTVAATEEVNQAVESTE 145
BLAST of mRNA_P-wetherbeei_contig7686.1.1 vs. uniprot
Match: V9G2Z6_PHYPR (C2H2-type domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=V9G2Z6_PHYPR) HSP 1 Score: 105 bits (263), Expect = 8.120e-25 Identity = 65/152 (42.76%), Postives = 82/152 (53.95%), Query Frame = 2
Query: 2 ACRKCRRVLFGASQLEDHQPARHDFS-KRKVGNLVVKAEVK*AFGIGVKFQHLSRPAALITQLKAGASKYACSSYFLAERALWMGDMGDVEGKIVCATASCGARLGSYKWAGSQCSCGTWVTPAIQITGSRVD-----ERLPMASGVDTPGA 439
AC+KCR VLF + QL H+P +H S +RK+ +L K + G V ACSSYFL E WM + EGKI C T C +RLG+ +W+GSQCSCGTWVTP+I+IT SRVD L + +GV P A
Sbjct: 32 ACKKCRCVLFTSEQLMPHEPEQHQISARRKLKDL------KHSVGANV----------------------ACSSYFLEETLSWMDEALLAEGKIHCPTLKCQSRLGALQWSGSQCSCGTWVTPSIKITKSRVDAVFKQSNLNIVTGVVLPNA 155
BLAST of mRNA_P-wetherbeei_contig7686.1.1 vs. uniprot
Match: A0A485L5N9_9STRA (Aste57867_16448 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L5N9_9STRA) HSP 1 Score: 105 bits (261), Expect = 8.830e-25 Identity = 57/136 (41.91%), Postives = 71/136 (52.21%), Query Frame = 2
Query: 5 CRKCRRVLFGASQLEDHQPARHDFSKRKVGNLVVKAEVK*AFGIGVKFQHLSRPAALITQLKAGASKYACSSYFLAERALWMGDMGDVEGKIVCATASCGARLGSYKWAGSQCSCGTWVTPAIQITGSRVDERLPM 412
CR CR LF + L +H P +H S RK I + K GA + CSSYFLA+ WM + +GKI C A C +RLGS+ W+GSQCSCGTW+TP+IQ T SRVD +L M
Sbjct: 12 CRMCRHHLFTSDDLMEHAPQQHQISMRKK----------------------------IKEGKLGAPE--CSSYFLADTKDWMDENAVADGKIFCPVAKCNSRLGSFNWSGSQCSCGTWITPSIQFTKSRVDVKLKM 117
BLAST of mRNA_P-wetherbeei_contig7686.1.1 vs. uniprot
Match: A0A225V835_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V835_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.030e-24 Identity = 64/151 (42.38%), Postives = 81/151 (53.64%), Query Frame = 2
Query: 2 ACRKCRRVLFGASQLEDHQPARHDFSKRKVGNLVVKAEVK*AFGIGVKFQHLSRPAALITQLKAGASKYACSSYFLAERALWMGDMGDVEGKIVCATASCGARLGSYKWAGSQCSCGTWVTPAIQITGSRVD-----ERLPMASGVDTPGA 439
AC+KCR VLF + QL H+P +H S R+ K + L AGA+ ACSS FL E WM + EGK+ C TA C +RLG+ +W+GSQCSCGTWVTP+I+IT SRVD L + +GV P A
Sbjct: 28 ACKKCRCVLFTSEQLAPHEPEQHQISTRR------------------KLKDLRH--------SAGAN-VACSSLFLEETLPWMDEALLAEGKVHCPTAKCHSRLGALQWSGSQCSCGTWVTPSIKITKSRVDAVFKQSNLNIVTGVVLPNA 151
BLAST of mRNA_P-wetherbeei_contig7686.1.1 vs. uniprot
Match: G4YYY9_PHYSP (C2H2-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YYY9_PHYSP) HSP 1 Score: 103 bits (258), Expect = 4.120e-24 Identity = 62/152 (40.79%), Postives = 78/152 (51.32%), Query Frame = 2
Query: 2 ACRKCRRVLFGASQLEDHQPARHDFSKRKVGNLVVKAEVK*AFGIGVKFQHLSRPAALITQLKAGASKYA-CSSYFLAERALWMGDMGDVEGKIVCATASCGARLGSYKWAGSQCSCGTWVTPAIQITGSRVD-----ERLPMASGVDTPGA 439
AC+KCR VLF + QL H+P RH S R+ + LK + CSS+FL E WM + EGKI C TA C +RLG+ +W+GSQCSCGTWVTP+I+IT SRVD L + +GV P A
Sbjct: 27 ACKKCRCVLFTSEQLTPHEPERHQISARR----------------------------RLKDLKHQVGGHVDCSSFFLEETLPWMDEALLAEGKIHCPTAKCQSRLGALQWSGSQCSCGTWVTPSIKITQSRVDAVIKQSNLNIVTGVVLPNA 150
BLAST of mRNA_P-wetherbeei_contig7686.1.1 vs. uniprot
Match: A0A2P4XRV7_9STRA (Tyrosine protein phosphatase 2 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRV7_9STRA) HSP 1 Score: 103 bits (256), Expect = 6.570e-24 Identity = 65/152 (42.76%), Postives = 81/152 (53.29%), Query Frame = 2
Query: 2 ACRKCRRVLFGASQLEDHQPARHDFS-KRKVGNLVVKAEVK*AFGIGVKFQHLSRPAALITQLKAGASKYACSSYFLAERALWMGDMGDVEGKIVCATASCGARLGSYKWAGSQCSCGTWVTPAIQITGSRVDE-----RLPMASGVDTPGA 439
AC+KCR VLF + QL H+P +H S +RK+ +L K G V+ CSSYFL E WM + EGKI C +A C ARLG+ +W+GSQCSCGTWVTP+I+IT SRVD L + GV P A
Sbjct: 24 ACKKCRCVLFTSEQLALHEPEQHQISARRKLKDL------KHHVGTNVE----------------------CSSYFLEETLSWMDEALLAEGKIHCPSAKCQARLGALQWSGSQCSCGTWVTPSIKITKSRVDAVVKQTNLNIVHGVVLPSA 147 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7686.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7686.1.1 >prot_P-wetherbeei_contig7686.1.1 ID=prot_P-wetherbeei_contig7686.1.1|Name=mRNA_P-wetherbeei_contig7686.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp MGDMGDVEGKIVCATASCGARLGSYKWAGSQCSCGTWVTPAIQITGSRVDback to top mRNA from alignment at P-wetherbeei_contig7686:1194..2389- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7686.1.1 ID=mRNA_P-wetherbeei_contig7686.1.1|Name=mRNA_P-wetherbeei_contig7686.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1196bp|location=Sequence derived from alignment at P-wetherbeei_contig7686:1194..2389- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7686:1194..2389- >mRNA_P-wetherbeei_contig7686.1.1 ID=mRNA_P-wetherbeei_contig7686.1.1|Name=mRNA_P-wetherbeei_contig7686.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=411bp|location=Sequence derived from alignment at P-wetherbeei_contig7686:1194..2389- (Phaeothamnion wetherbeei SAG_119_79)back to top |