mRNA_P-wetherbeei_contig7369.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: A0A3C0TRQ7_9PROT (Cytochrome b (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TRQ7_9PROT) HSP 1 Score: 471 bits (1212), Expect = 2.810e-166 Identity = 218/247 (88.26%), Postives = 237/247 (95.95%), Query Frame = 1
Query: 1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF 741
MSGH+E+QP SAPAKWLERRLPILS +HG+ +AFPTP NLNYWWTFGGILMFCL+TQIITG++LVMH+TPHVDLAF+SVEHIMRDVNYGWLIRYIH+NGASMFF+AVYIHMFRGLYYGSYKEPRE+IWILG+VIYLLM AAAFFGYVLVWGQMSFWGATVITNLFGAIP+VGD LL++LWGGFSVDNPTLNR FSLHYLVPFLI GVVVLHIWALHVPGNNNP+GIDVKGPQDTV FHPYY+ KDTF
Sbjct: 1 MSGHSEYQPVSAPAKWLERRLPILSFIHGSFVAFPTPANLNYWWTFGGILMFCLVTQIITGIVLVMHYTPHVDLAFSSVEHIMRDVNYGWLIRYIHANGASMFFIAVYIHMFRGLYYGSYKEPREMIWILGVVIYLLMMAAAFFGYVLVWGQMSFWGATVITNLFGAIPLVGDYLLSLLWGGFSVDNPTLNRFFSLHYLVPFLIFGVVVLHIWALHVPGNNNPMGIDVKGPQDTVPFHPYYSAKDTF 247
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: A0A352KBA9_9PROT (Cytochrome b n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KBA9_9PROT) HSP 1 Score: 457 bits (1177), Expect = 1.680e-159 Identity = 212/247 (85.83%), Postives = 231/247 (93.52%), Query Frame = 1
Query: 1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF 741
MSG F+P SAPAKWLE RLPI+ L+H + +AFPTPKNLNYWWTFGGILMFCL+TQIITG++LVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIH+NGASMFF+AVYIHMFRGLYYGSYKEPREL+WILG+VIYLLM AAAFFGYV+VWGQMSFWGATVITNLFGAIPV+GD LL++LWGGF+VDNPTLNR FSLHYLVPFLI GVV+LHIWALHVPGNNNP GIDVKG QDTV FHPYYT+KD F
Sbjct: 1 MSGAPTFEPQSAPAKWLESRLPIMGLVHSSFVAFPTPKNLNYWWTFGGILMFCLITQIITGIVLVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHANGASMFFIAVYIHMFRGLYYGSYKEPRELLWILGVVIYLLMMAAAFFGYVIVWGQMSFWGATVITNLFGAIPVIGDPLLSLLWGGFAVDNPTLNRFFSLHYLVPFLIFGVVILHIWALHVPGNNNPAGIDVKGEQDTVPFHPYYTVKDLF 247
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: A0A2E6U299_9HYPH (Cytochrome b n=2 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E6U299_9HYPH) HSP 1 Score: 415 bits (1067), Expect = 5.250e-143 Identity = 191/247 (77.33%), Postives = 216/247 (87.45%), Query Frame = 1
Query: 1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF 741
MSG + + P S AKW++ RLPIL L H + + +PTPKNLNYWWTFGGIL FCL+TQIITG+IL MH+TPHVD AF SVEHIMR+VNYGWLIRYIHSNGASMFFLAVYIH+FRGLYYGSYK PRE++WILG++IYLLM AAAF GYVL WGQMS WGATVITNLFGAIPVVG+++ LWGG+S+DNPTLNR FSLHYL+PFLI GVV+LHIWALHVPGNNNP+GI VK QDTV FHPYYT+KD F
Sbjct: 1 MSGESTYNPRSGFAKWMDSRLPILRLAHDSFVDYPTPKNLNYWWTFGGILTFCLVTQIITGIILAMHYTPHVDFAFNSVEHIMRNVNYGWLIRYIHSNGASMFFLAVYIHIFRGLYYGSYKAPREVLWILGVIIYLLMMAAAFMGYVLPWGQMSLWGATVITNLFGAIPVVGESVAIWLWGGYSIDNPTLNRFFSLHYLIPFLIMGVVILHIWALHVPGNNNPVGISVKSKQDTVPFHPYYTVKDGF 247
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: J9DI98_9PROT (Cytochrome b n=8 Tax=Alphaproteobacteria TaxID=28211 RepID=J9DI98_9PROT) HSP 1 Score: 410 bits (1054), Expect = 5.480e-141 Identity = 187/247 (75.71%), Postives = 217/247 (87.85%), Query Frame = 1
Query: 1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF 741
MSG + +QP++ +W++ RLP+L L H + + +PTPKNLNYWWTFGGIL FCL+TQIITG+IL MH+TPHVD AF SVEHIMR+VN+GWLIRYIH+NGASMFFLAVYIH+FRG+YYGSYK PRE++WILG++IYLLM AAAF GYVL WGQMS WGATVITNLFGAIP+VGD++ LWGGFSVDNPTLNR FSLHYL+PFLI GVV+LHIWALHVPGNNNP+GI VK QDTV FHPYYT+KD F
Sbjct: 1 MSGESTYQPSNGFTQWMDTRLPLLRLAHDSFVDYPTPKNLNYWWTFGGILTFCLVTQIITGIILAMHYTPHVDHAFNSVEHIMRNVNHGWLIRYIHANGASMFFLAVYIHIFRGMYYGSYKAPREVLWILGVIIYLLMMAAAFMGYVLPWGQMSLWGATVITNLFGAIPLVGDSIATWLWGGFSVDNPTLNRFFSLHYLIPFLIFGVVILHIWALHVPGNNNPVGISVKSEQDTVPFHPYYTVKDGF 247
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: G8PH81_PSEUV (Cytochrome b n=4 Tax=Pseudovibrio TaxID=258255 RepID=G8PH81_PSEUV) HSP 1 Score: 409 bits (1050), Expect = 2.630e-140 Identity = 182/247 (73.68%), Postives = 215/247 (87.04%), Query Frame = 1
Query: 1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF 741
M+GH+ ++P +A AKWLERRLP+LSL+HG+ +AFPTPKNLNYWWTFGGI F L+ Q+ITG++LVMH+TPH LAF SVEHIMRDVNYGWLIRY+H NGASMFF+AVYIH+FRGLYYGSYKEPRE+ WILG++++LLM A AF GYVL WGQMS WGATVITNLF AIP+VGD++ LWGGFSV NPTLNR FSLHYL+PF+I G+V+LHIWA HV GNNNP+G+D K +DT+ FHPYYTMKD F
Sbjct: 1 MAGHSTYEPQNAGAKWLERRLPVLSLVHGSFVAFPTPKNLNYWWTFGGIAFFMLVVQLITGIVLVMHYTPHETLAFLSVEHIMRDVNYGWLIRYLHMNGASMFFIAVYIHIFRGLYYGSYKEPREIAWILGVLLFLLMMATAFMGYVLPWGQMSLWGATVITNLFSAIPIVGDSITTWLWGGFSVGNPTLNRFFSLHYLLPFVIVGIVILHIWAFHVAGNNNPVGVDPKSEKDTIPFHPYYTMKDLF 247
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: A0A1M7ZDY4_9HYPH (Cytochrome b n=1 Tax=Pseudoxanthobacter soli DSM 19599 TaxID=1123029 RepID=A0A1M7ZDY4_9HYPH) HSP 1 Score: 407 bits (1046), Expect = 1.220e-139 Identity = 186/245 (75.92%), Postives = 219/245 (89.39%), Query Frame = 1
Query: 1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKD 735
MSGH+ ++P SAPAKWLE+RLPI+SL+HG AIAFPTPKNLNY+WTFGGIL+F L+ QIITGV+LVMH+ P+ +AF+ VE IMRDVNYGWL+RY+H+NGASMFF+AVYIH+FRGLYYGSYKEPRE++WILG++I+LLM A F GYVL WGQMSFWGATVITNLF AIP+VG++++ LWGGFSVDN TLNR FSLHYL+PF+IAGVVVLHIWALH+ GNNNP GI V+ QDTVTFHPYYT KD
Sbjct: 1 MSGHSTYEPKSAPAKWLEKRLPIISLVHGQAIAFPTPKNLNYFWTFGGILVFMLVAQIITGVVLVMHYAPNTLVAFSGVEAIMRDVNYGWLLRYLHANGASMFFIAVYIHIFRGLYYGSYKEPREVLWILGVIIFLLMMATGFMGYVLPWGQMSFWGATVITNLFSAIPIVGESVVTWLWGGFSVDNATLNRFFSLHYLLPFMIAGVVVLHIWALHIAGNNNPTGISVQSKQDTVTFHPYYTTKD 245
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: A0A2D7FRL2_9HYPH (Cytochrome b n=6 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2D7FRL2_9HYPH) HSP 1 Score: 405 bits (1042), Expect = 3.520e-139 Identity = 185/247 (74.90%), Postives = 213/247 (86.23%), Query Frame = 1
Query: 1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF 741
MSG + + PT+ A+W++ RLPI+ L+H +PTPKN+NYWWTFGGIL FCL+TQI+TG+IL MH+TPHVD AF SVEHIMR+VNYGWLIRYIHSNGASMFFLAVYIH+FRG+YYGSYK PRE++WILG++IYLLM AAAF GY+L WGQMS WGATVITNLFGAIPVVGD + LWGG S+DNPTLNR FSLHYL+PFLI GVV+LHIWALHVPGNNNP+GI VK QDTV FHPY T+KD F
Sbjct: 1 MSGESTYNPTNGFARWMDTRLPIMRLVHDNITDYPTPKNINYWWTFGGILTFCLVTQIVTGIILAMHYTPHVDHAFNSVEHIMRNVNYGWLIRYIHSNGASMFFLAVYIHIFRGMYYGSYKAPREVLWILGVIIYLLMIAAAFLGYMLPWGQMSLWGATVITNLFGAIPVVGDNIALWLWGGVSIDNPTLNRFFSLHYLLPFLIFGVVILHIWALHVPGNNNPIGISVKSKQDTVPFHPYITVKDAF 247
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: A0A1U7JLJ5_9HYPH (Cytochrome b n=1 Tax=Pseudovibrio exalbescens TaxID=197461 RepID=A0A1U7JLJ5_9HYPH) HSP 1 Score: 405 bits (1042), Expect = 3.650e-139 Identity = 181/245 (73.88%), Postives = 214/245 (87.35%), Query Frame = 1
Query: 1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKD 735
M+GHT++ P SAPAKWLE RLP++SL+ G+ + FPTPKNLNYWWTFGGI F L+ QI+TG++LVMH+TPHVD+AFASVEHIMRDVNYGWLIRY+H+NGASMFF+AVYIH+FRG+YYGSYK PRE+ WILG++I+LLM A AF GYVL WGQMS WGATVITNLF AIPVVG+ ++ LWGGFSV NPTLNR FSLHYL+PF+I GVV+LHIWA H GNNNP+G+D K +DT+ FHPYYTMKD
Sbjct: 1 MAGHTKYVPQSAPAKWLEARLPVISLIRGSFVDFPTPKNLNYWWTFGGIAFFVLVVQIVTGIVLVMHYTPHVDMAFASVEHIMRDVNYGWLIRYLHANGASMFFIAVYIHIFRGMYYGSYKAPREISWILGVIIFLLMMATAFMGYVLPWGQMSLWGATVITNLFSAIPVVGEGIVTWLWGGFSVGNPTLNRFFSLHYLLPFVIVGVVLLHIWAFHTTGNNNPVGVDPKSDKDTIPFHPYYTMKD 245
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: UPI0017AC502C (Cytochrome b/b6 n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=UPI0017AC502C) HSP 1 Score: 401 bits (1030), Expect = 4.010e-139 Identity = 180/247 (72.87%), Postives = 209/247 (84.62%), Query Frame = 1
Query: 1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF 741
MSGH+ + P SA AKWLE RLP++SL+ G+ + FPTPKNLNYWWTFGGIL F L+ QIITGV+L MH+TPH LAF SVEHIMRDVN+GW++RY+H+NGASMFF+AVYIH+FRGLYYGSYK PRE+ WILG++I+LLM AF GYVL WGQMSFWGATVITNLF AIPVVGD + +LWGGFSVDNPTLNR FSLHYL+PF+I GVV+LH+WA H GNNNP G+ K QDTV FHPYYT+KD F
Sbjct: 1 MSGHSNYVPQSAAAKWLESRLPVISLVRGSFVDFPTPKNLNYWWTFGGILAFALVAQIITGVVLAMHYTPHTSLAFDSVEHIMRDVNFGWMLRYLHANGASMFFIAVYIHIFRGLYYGSYKAPREISWILGVIIFLLMMGTAFMGYVLPWGQMSFWGATVITNLFSAIPVVGDAIKTLLWGGFSVDNPTLNRFFSLHYLLPFMIVGVVILHVWAFHTTGNNNPTGVQPKSKQDTVPFHPYYTIKDLF 247
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: A0A7S8C6H4_9HYPH (Cytochrome b n=1 Tax=Kaustia mangrovi TaxID=2593653 RepID=A0A7S8C6H4_9HYPH) HSP 1 Score: 405 bits (1040), Expect = 8.390e-139 Identity = 182/247 (73.68%), Postives = 214/247 (86.64%), Query Frame = 1
Query: 1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF 741
MSGH+ FQP +A KWL++RLPI+SLM A+ FPTPKNLNYWWTFGGILM CL+ QI+TG++LVMH+TPH DLAF SVE IMRDVNYGWL+RY+H+NGAS FF+AVYIH+FRGLYYGSYK PRE++WILG++I L+M A AF GYVL WGQMSFWGA VITNLF A+P VGD+++ LWGGFSVDNPTL R FSLHYL+PF++AG+VVLH+WALHVPGNNNP G+DVK DTV FHPYYT+KD F
Sbjct: 1 MSGHSTFQPKNAAVKWLDQRLPIISLMTEHAMDFPTPKNLNYWWTFGGILMLCLVLQIVTGIVLVMHYTPHTDLAFRSVEQIMRDVNYGWLLRYMHANGASFFFIAVYIHIFRGLYYGSYKAPREVLWILGVIILLVMMATAFMGYVLPWGQMSFWGAKVITNLFSAVPFVGDSIVTWLWGGFSVDNPTLQRFFSLHYLLPFVLAGIVVLHVWALHVPGNNNPTGVDVKSGADTVPFHPYYTIKDGF 247 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7369.1.1 >prot_P-wetherbeei_contig7369.1.1 ID=prot_P-wetherbeei_contig7369.1.1|Name=mRNA_P-wetherbeei_contig7369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILback to top mRNA from alignment at P-wetherbeei_contig7369:1..741- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7369.1.1 ID=mRNA_P-wetherbeei_contig7369.1.1|Name=mRNA_P-wetherbeei_contig7369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig7369:1..741- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7369:1..741- >mRNA_P-wetherbeei_contig7369.1.1 ID=mRNA_P-wetherbeei_contig7369.1.1|Name=mRNA_P-wetherbeei_contig7369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig7369:1..741- (Phaeothamnion wetherbeei SAG_119_79)back to top |