mRNA_P-wetherbeei_contig7369.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7369.1.1
Unique NamemRNA_P-wetherbeei_contig7369.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: A0A3C0TRQ7_9PROT (Cytochrome b (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TRQ7_9PROT)

HSP 1 Score: 471 bits (1212), Expect = 2.810e-166
Identity = 218/247 (88.26%), Postives = 237/247 (95.95%), Query Frame = 1
Query:    1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF 741
            MSGH+E+QP SAPAKWLERRLPILS +HG+ +AFPTP NLNYWWTFGGILMFCL+TQIITG++LVMH+TPHVDLAF+SVEHIMRDVNYGWLIRYIH+NGASMFF+AVYIHMFRGLYYGSYKEPRE+IWILG+VIYLLM AAAFFGYVLVWGQMSFWGATVITNLFGAIP+VGD LL++LWGGFSVDNPTLNR FSLHYLVPFLI GVVVLHIWALHVPGNNNP+GIDVKGPQDTV FHPYY+ KDTF
Sbjct:    1 MSGHSEYQPVSAPAKWLERRLPILSFIHGSFVAFPTPANLNYWWTFGGILMFCLVTQIITGIVLVMHYTPHVDLAFSSVEHIMRDVNYGWLIRYIHANGASMFFIAVYIHMFRGLYYGSYKEPREMIWILGVVIYLLMMAAAFFGYVLVWGQMSFWGATVITNLFGAIPLVGDYLLSLLWGGFSVDNPTLNRFFSLHYLVPFLIFGVVVLHIWALHVPGNNNPMGIDVKGPQDTVPFHPYYSAKDTF 247          
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: A0A352KBA9_9PROT (Cytochrome b n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KBA9_9PROT)

HSP 1 Score: 457 bits (1177), Expect = 1.680e-159
Identity = 212/247 (85.83%), Postives = 231/247 (93.52%), Query Frame = 1
Query:    1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF 741
            MSG   F+P SAPAKWLE RLPI+ L+H + +AFPTPKNLNYWWTFGGILMFCL+TQIITG++LVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIH+NGASMFF+AVYIHMFRGLYYGSYKEPREL+WILG+VIYLLM AAAFFGYV+VWGQMSFWGATVITNLFGAIPV+GD LL++LWGGF+VDNPTLNR FSLHYLVPFLI GVV+LHIWALHVPGNNNP GIDVKG QDTV FHPYYT+KD F
Sbjct:    1 MSGAPTFEPQSAPAKWLESRLPIMGLVHSSFVAFPTPKNLNYWWTFGGILMFCLITQIITGIVLVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHANGASMFFIAVYIHMFRGLYYGSYKEPRELLWILGVVIYLLMMAAAFFGYVIVWGQMSFWGATVITNLFGAIPVIGDPLLSLLWGGFAVDNPTLNRFFSLHYLVPFLIFGVVILHIWALHVPGNNNPAGIDVKGEQDTVPFHPYYTVKDLF 247          
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: A0A2E6U299_9HYPH (Cytochrome b n=2 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E6U299_9HYPH)

HSP 1 Score: 415 bits (1067), Expect = 5.250e-143
Identity = 191/247 (77.33%), Postives = 216/247 (87.45%), Query Frame = 1
Query:    1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF 741
            MSG + + P S  AKW++ RLPIL L H + + +PTPKNLNYWWTFGGIL FCL+TQIITG+IL MH+TPHVD AF SVEHIMR+VNYGWLIRYIHSNGASMFFLAVYIH+FRGLYYGSYK PRE++WILG++IYLLM AAAF GYVL WGQMS WGATVITNLFGAIPVVG+++   LWGG+S+DNPTLNR FSLHYL+PFLI GVV+LHIWALHVPGNNNP+GI VK  QDTV FHPYYT+KD F
Sbjct:    1 MSGESTYNPRSGFAKWMDSRLPILRLAHDSFVDYPTPKNLNYWWTFGGILTFCLVTQIITGIILAMHYTPHVDFAFNSVEHIMRNVNYGWLIRYIHSNGASMFFLAVYIHIFRGLYYGSYKAPREVLWILGVIIYLLMMAAAFMGYVLPWGQMSLWGATVITNLFGAIPVVGESVAIWLWGGYSIDNPTLNRFFSLHYLIPFLIMGVVILHIWALHVPGNNNPVGISVKSKQDTVPFHPYYTVKDGF 247          
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: J9DI98_9PROT (Cytochrome b n=8 Tax=Alphaproteobacteria TaxID=28211 RepID=J9DI98_9PROT)

HSP 1 Score: 410 bits (1054), Expect = 5.480e-141
Identity = 187/247 (75.71%), Postives = 217/247 (87.85%), Query Frame = 1
Query:    1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF 741
            MSG + +QP++   +W++ RLP+L L H + + +PTPKNLNYWWTFGGIL FCL+TQIITG+IL MH+TPHVD AF SVEHIMR+VN+GWLIRYIH+NGASMFFLAVYIH+FRG+YYGSYK PRE++WILG++IYLLM AAAF GYVL WGQMS WGATVITNLFGAIP+VGD++   LWGGFSVDNPTLNR FSLHYL+PFLI GVV+LHIWALHVPGNNNP+GI VK  QDTV FHPYYT+KD F
Sbjct:    1 MSGESTYQPSNGFTQWMDTRLPLLRLAHDSFVDYPTPKNLNYWWTFGGILTFCLVTQIITGIILAMHYTPHVDHAFNSVEHIMRNVNHGWLIRYIHANGASMFFLAVYIHIFRGMYYGSYKAPREVLWILGVIIYLLMMAAAFMGYVLPWGQMSLWGATVITNLFGAIPLVGDSIATWLWGGFSVDNPTLNRFFSLHYLIPFLIFGVVILHIWALHVPGNNNPVGISVKSEQDTVPFHPYYTVKDGF 247          
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: G8PH81_PSEUV (Cytochrome b n=4 Tax=Pseudovibrio TaxID=258255 RepID=G8PH81_PSEUV)

HSP 1 Score: 409 bits (1050), Expect = 2.630e-140
Identity = 182/247 (73.68%), Postives = 215/247 (87.04%), Query Frame = 1
Query:    1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF 741
            M+GH+ ++P +A AKWLERRLP+LSL+HG+ +AFPTPKNLNYWWTFGGI  F L+ Q+ITG++LVMH+TPH  LAF SVEHIMRDVNYGWLIRY+H NGASMFF+AVYIH+FRGLYYGSYKEPRE+ WILG++++LLM A AF GYVL WGQMS WGATVITNLF AIP+VGD++   LWGGFSV NPTLNR FSLHYL+PF+I G+V+LHIWA HV GNNNP+G+D K  +DT+ FHPYYTMKD F
Sbjct:    1 MAGHSTYEPQNAGAKWLERRLPVLSLVHGSFVAFPTPKNLNYWWTFGGIAFFMLVVQLITGIVLVMHYTPHETLAFLSVEHIMRDVNYGWLIRYLHMNGASMFFIAVYIHIFRGLYYGSYKEPREIAWILGVLLFLLMMATAFMGYVLPWGQMSLWGATVITNLFSAIPIVGDSITTWLWGGFSVGNPTLNRFFSLHYLLPFVIVGIVILHIWAFHVAGNNNPVGVDPKSEKDTIPFHPYYTMKDLF 247          
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: A0A1M7ZDY4_9HYPH (Cytochrome b n=1 Tax=Pseudoxanthobacter soli DSM 19599 TaxID=1123029 RepID=A0A1M7ZDY4_9HYPH)

HSP 1 Score: 407 bits (1046), Expect = 1.220e-139
Identity = 186/245 (75.92%), Postives = 219/245 (89.39%), Query Frame = 1
Query:    1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKD 735
            MSGH+ ++P SAPAKWLE+RLPI+SL+HG AIAFPTPKNLNY+WTFGGIL+F L+ QIITGV+LVMH+ P+  +AF+ VE IMRDVNYGWL+RY+H+NGASMFF+AVYIH+FRGLYYGSYKEPRE++WILG++I+LLM A  F GYVL WGQMSFWGATVITNLF AIP+VG++++  LWGGFSVDN TLNR FSLHYL+PF+IAGVVVLHIWALH+ GNNNP GI V+  QDTVTFHPYYT KD
Sbjct:    1 MSGHSTYEPKSAPAKWLEKRLPIISLVHGQAIAFPTPKNLNYFWTFGGILVFMLVAQIITGVVLVMHYAPNTLVAFSGVEAIMRDVNYGWLLRYLHANGASMFFIAVYIHIFRGLYYGSYKEPREVLWILGVIIFLLMMATGFMGYVLPWGQMSFWGATVITNLFSAIPIVGESVVTWLWGGFSVDNATLNRFFSLHYLLPFMIAGVVVLHIWALHIAGNNNPTGISVQSKQDTVTFHPYYTTKD 245          
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: A0A2D7FRL2_9HYPH (Cytochrome b n=6 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2D7FRL2_9HYPH)

HSP 1 Score: 405 bits (1042), Expect = 3.520e-139
Identity = 185/247 (74.90%), Postives = 213/247 (86.23%), Query Frame = 1
Query:    1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF 741
            MSG + + PT+  A+W++ RLPI+ L+H     +PTPKN+NYWWTFGGIL FCL+TQI+TG+IL MH+TPHVD AF SVEHIMR+VNYGWLIRYIHSNGASMFFLAVYIH+FRG+YYGSYK PRE++WILG++IYLLM AAAF GY+L WGQMS WGATVITNLFGAIPVVGD +   LWGG S+DNPTLNR FSLHYL+PFLI GVV+LHIWALHVPGNNNP+GI VK  QDTV FHPY T+KD F
Sbjct:    1 MSGESTYNPTNGFARWMDTRLPIMRLVHDNITDYPTPKNINYWWTFGGILTFCLVTQIVTGIILAMHYTPHVDHAFNSVEHIMRNVNYGWLIRYIHSNGASMFFLAVYIHIFRGMYYGSYKAPREVLWILGVIIYLLMIAAAFLGYMLPWGQMSLWGATVITNLFGAIPVVGDNIALWLWGGVSIDNPTLNRFFSLHYLLPFLIFGVVILHIWALHVPGNNNPIGISVKSKQDTVPFHPYITVKDAF 247          
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: A0A1U7JLJ5_9HYPH (Cytochrome b n=1 Tax=Pseudovibrio exalbescens TaxID=197461 RepID=A0A1U7JLJ5_9HYPH)

HSP 1 Score: 405 bits (1042), Expect = 3.650e-139
Identity = 181/245 (73.88%), Postives = 214/245 (87.35%), Query Frame = 1
Query:    1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKD 735
            M+GHT++ P SAPAKWLE RLP++SL+ G+ + FPTPKNLNYWWTFGGI  F L+ QI+TG++LVMH+TPHVD+AFASVEHIMRDVNYGWLIRY+H+NGASMFF+AVYIH+FRG+YYGSYK PRE+ WILG++I+LLM A AF GYVL WGQMS WGATVITNLF AIPVVG+ ++  LWGGFSV NPTLNR FSLHYL+PF+I GVV+LHIWA H  GNNNP+G+D K  +DT+ FHPYYTMKD
Sbjct:    1 MAGHTKYVPQSAPAKWLEARLPVISLIRGSFVDFPTPKNLNYWWTFGGIAFFVLVVQIVTGIVLVMHYTPHVDMAFASVEHIMRDVNYGWLIRYLHANGASMFFIAVYIHIFRGMYYGSYKAPREISWILGVIIFLLMMATAFMGYVLPWGQMSLWGATVITNLFSAIPVVGEGIVTWLWGGFSVGNPTLNRFFSLHYLLPFVIVGVVLLHIWAFHTTGNNNPVGVDPKSDKDTIPFHPYYTMKD 245          
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: UPI0017AC502C (Cytochrome b/b6 n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=UPI0017AC502C)

HSP 1 Score: 401 bits (1030), Expect = 4.010e-139
Identity = 180/247 (72.87%), Postives = 209/247 (84.62%), Query Frame = 1
Query:    1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF 741
            MSGH+ + P SA AKWLE RLP++SL+ G+ + FPTPKNLNYWWTFGGIL F L+ QIITGV+L MH+TPH  LAF SVEHIMRDVN+GW++RY+H+NGASMFF+AVYIH+FRGLYYGSYK PRE+ WILG++I+LLM   AF GYVL WGQMSFWGATVITNLF AIPVVGD +  +LWGGFSVDNPTLNR FSLHYL+PF+I GVV+LH+WA H  GNNNP G+  K  QDTV FHPYYT+KD F
Sbjct:    1 MSGHSNYVPQSAAAKWLESRLPVISLVRGSFVDFPTPKNLNYWWTFGGILAFALVAQIITGVVLAMHYTPHTSLAFDSVEHIMRDVNFGWMLRYLHANGASMFFIAVYIHIFRGLYYGSYKAPREISWILGVIIFLLMMGTAFMGYVLPWGQMSFWGATVITNLFSAIPVVGDAIKTLLWGGFSVDNPTLNRFFSLHYLLPFMIVGVVILHVWAFHTTGNNNPTGVQPKSKQDTVPFHPYYTIKDLF 247          
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Match: A0A7S8C6H4_9HYPH (Cytochrome b n=1 Tax=Kaustia mangrovi TaxID=2593653 RepID=A0A7S8C6H4_9HYPH)

HSP 1 Score: 405 bits (1040), Expect = 8.390e-139
Identity = 182/247 (73.68%), Postives = 214/247 (86.64%), Query Frame = 1
Query:    1 MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGILMFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGASMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVWGQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLVPFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF 741
            MSGH+ FQP +A  KWL++RLPI+SLM   A+ FPTPKNLNYWWTFGGILM CL+ QI+TG++LVMH+TPH DLAF SVE IMRDVNYGWL+RY+H+NGAS FF+AVYIH+FRGLYYGSYK PRE++WILG++I L+M A AF GYVL WGQMSFWGA VITNLF A+P VGD+++  LWGGFSVDNPTL R FSLHYL+PF++AG+VVLH+WALHVPGNNNP G+DVK   DTV FHPYYT+KD F
Sbjct:    1 MSGHSTFQPKNAAVKWLDQRLPIISLMTEHAMDFPTPKNLNYWWTFGGILMLCLVLQIVTGIVLVMHYTPHTDLAFRSVEQIMRDVNYGWLLRYMHANGASFFFIAVYIHIFRGLYYGSYKAPREVLWILGVIILLVMMATAFMGYVLPWGQMSFWGAKVITNLFSAVPFVGDSIVTWLWGGFSVDNPTLQRFFSLHYLLPFVLAGIVVLHVWALHVPGNNNPTGVDVKSGADTVPFHPYYTIKDGF 247          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7369.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TRQ7_9PROT2.810e-16688.26Cytochrome b (Fragment) n=1 Tax=Alphaproteobacteri... [more]
A0A352KBA9_9PROT1.680e-15985.83Cytochrome b n=2 Tax=Alphaproteobacteria bacterium... [more]
A0A2E6U299_9HYPH5.250e-14377.33Cytochrome b n=2 Tax=Rhodobiaceae bacterium TaxID=... [more]
J9DI98_9PROT5.480e-14175.71Cytochrome b n=8 Tax=Alphaproteobacteria TaxID=282... [more]
G8PH81_PSEUV2.630e-14073.68Cytochrome b n=4 Tax=Pseudovibrio TaxID=258255 Rep... [more]
A0A1M7ZDY4_9HYPH1.220e-13975.92Cytochrome b n=1 Tax=Pseudoxanthobacter soli DSM 1... [more]
A0A2D7FRL2_9HYPH3.520e-13974.90Cytochrome b n=6 Tax=Hyphomicrobiales TaxID=356 Re... [more]
A0A1U7JLJ5_9HYPH3.650e-13973.88Cytochrome b n=1 Tax=Pseudovibrio exalbescens TaxI... [more]
UPI0017AC502C4.010e-13972.87Cytochrome b/b6 n=1 Tax=Rhodobacteraceae bacterium... [more]
A0A7S8C6H4_9HYPH8.390e-13973.68Cytochrome b n=1 Tax=Kaustia mangrovi TaxID=259365... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7369contigP-wetherbeei_contig7369:1..741 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1397666.RS24_01102
Preferred namepetB
PFAMsCytochrom_B_C,Cytochrom_C1,Cytochrome_B
Model size741
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K00410,ko:K00412
KEGG Pathwayko00190,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016
KEGG ModuleM00151,M00152
Hectar predicted targeting categorysignal anchor
Exons1
Evalue3.15e-142
EggNOG OGsCOG1290@1|root,COG1290@2|Bacteria,1MV97@1224|Proteobacteria,2TSZ3@28211|Alphaproteobacteria,4BPD0@82117|unclassified Alphaproteobacteria
DescriptionComponent of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
Cds size741
COG categoryC
BRITEko00000,ko00001,ko00002,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186976.7037714-CDS-P-wetherbeei_contig7369:0..7411683186976.7037714-CDS-P-wetherbeei_contig7369:0..741Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7369 1..741 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7369.1.1prot_P-wetherbeei_contig7369.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7369 1..741 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7369.1.1

>prot_P-wetherbeei_contig7369.1.1 ID=prot_P-wetherbeei_contig7369.1.1|Name=mRNA_P-wetherbeei_contig7369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp
MSGHTEFQPTSAPAKWLERRLPILSLMHGAAIAFPTPKNLNYWWTFGGIL
MFCLMTQIITGVILVMHFTPHVDLAFASVEHIMRDVNYGWLIRYIHSNGA
SMFFLAVYIHMFRGLYYGSYKEPRELIWILGMVIYLLMTAAAFFGYVLVW
GQMSFWGATVITNLFGAIPVVGDTLLAMLWGGFSVDNPTLNRLFSLHYLV
PFLIAGVVVLHIWALHVPGNNNPLGIDVKGPQDTVTFHPYYTMKDTF
back to top

mRNA from alignment at P-wetherbeei_contig7369:1..741-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7369.1.1 ID=mRNA_P-wetherbeei_contig7369.1.1|Name=mRNA_P-wetherbeei_contig7369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig7369:1..741- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCGGACATACAGAATTCCAACCCACCAGCGCGCCCGCCAAATGGCT GGAGCGGCGGCTGCCGATCCTGAGCCTGATGCATGGCGCGGCCATCGCCT TTCCGACGCCCAAAAATCTGAATTACTGGTGGACCTTTGGCGGCATTTTG ATGTTCTGCCTGATGACGCAGATCATTACCGGCGTCATTCTGGTGATGCA TTTCACGCCGCATGTGGACCTGGCCTTCGCCAGTGTCGAGCACATCATGC GCGATGTGAATTATGGCTGGCTGATCCGCTATATTCATTCCAACGGCGCG TCGATGTTCTTTCTCGCCGTGTATATCCATATGTTCCGTGGCCTGTATTA CGGTTCGTATAAGGAGCCGCGTGAGCTGATCTGGATTCTGGGCATGGTGA TTTACCTGCTGATGACGGCGGCGGCGTTCTTTGGCTATGTGCTGGTCTGG GGGCAGATGAGCTTCTGGGGCGCCACCGTGATCACCAATCTGTTCGGCGC GATCCCGGTGGTGGGCGACACGCTGCTGGCCATGCTCTGGGGCGGCTTTT CGGTCGATAATCCGACGCTGAACCGCCTGTTCAGCCTGCATTATCTGGTG CCGTTCCTGATTGCGGGCGTGGTGGTGCTGCATATCTGGGCGCTGCATGT GCCGGGCAACAACAACCCGCTGGGCATCGATGTAAAAGGTCCGCAGGATA CGGTGACGTTCCATCCCTATTACACGATGAAGGATACGTTC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig7369:1..741-

>mRNA_P-wetherbeei_contig7369.1.1 ID=mRNA_P-wetherbeei_contig7369.1.1|Name=mRNA_P-wetherbeei_contig7369.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig7369:1..741- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCGGACATACAGAATTCCAACCCACCAGCGCGCCCGCCAAATGGCT
GGAGCGGCGGCTGCCGATCCTGAGCCTGATGCATGGCGCGGCCATCGCCT
TTCCGACGCCCAAAAATCTGAATTACTGGTGGACCTTTGGCGGCATTTTG
ATGTTCTGCCTGATGACGCAGATCATTACCGGCGTCATTCTGGTGATGCA
TTTCACGCCGCATGTGGACCTGGCCTTCGCCAGTGTCGAGCACATCATGC
GCGATGTGAATTATGGCTGGCTGATCCGCTATATTCATTCCAACGGCGCG
TCGATGTTCTTTCTCGCCGTGTATATCCATATGTTCCGTGGCCTGTATTA
CGGTTCGTATAAGGAGCCGCGTGAGCTGATCTGGATTCTGGGCATGGTGA
TTTACCTGCTGATGACGGCGGCGGCGTTCTTTGGCTATGTGCTGGTCTGG
GGGCAGATGAGCTTCTGGGGCGCCACCGTGATCACCAATCTGTTCGGCGC
GATCCCGGTGGTGGGCGACACGCTGCTGGCCATGCTCTGGGGCGGCTTTT
CGGTCGATAATCCGACGCTGAACCGCCTGTTCAGCCTGCATTATCTGGTG
CCGTTCCTGATTGCGGGCGTGGTGGTGCTGCATATCTGGGCGCTGCATGT
GCCGGGCAACAACAACCCGCTGGGCATCGATGTAAAAGGTCCGCAGGATA
CGGTGACGTTCCATCCCTATTACACGATGAAGGATACGTTC
back to top