mRNA_P-wetherbeei_contig7021.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7021.3.1 vs. uniprot
Match: A0A835YZJ0_9STRA (Copper chaperone n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZJ0_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.120e-25 Identity = 49/70 (70.00%), Postives = 53/70 (75.71%), Query Frame = 1
Query: 37 EKVTFKVGMTCEGCGNACKRILGRLDGVSEVTVDVDTKMVVVTSDGVTPPQTMLEALMKWSAASGKTVEL 246
E V FKVGMTCEGC NACKRILG++ GVS V DV K V V+SDG T PQ ML+AL WSAASGK VEL
Sbjct: 4 ETVVFKVGMTCEGCANACKRILGKMSGVSAVNTDVAAKTVTVSSDGTTSPQAMLDALKVWSAASGKPVEL 73
BLAST of mRNA_P-wetherbeei_contig7021.3.1 vs. uniprot
Match: A0A6H5L5L5_9PHAE (HMA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5L5_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 2.440e-22 Identity = 44/71 (61.97%), Postives = 53/71 (74.65%), Query Frame = 1
Query: 34 AEKVTFKVGMTCEGCGNACKRILGRLDGVSEVTVDVDTKMVVVTSDGVTPPQTMLEALMKWSAASGKTVEL 246
+E F VGMTC+GC NA KRIL +++GVS V DV K V V+SDG T Q ML+AL+KWSAASGK+VEL
Sbjct: 2 SETTVFNVGMTCDGCANATKRILSKMEGVSAVEADVSAKTVTVSSDGSTTKQAMLDALLKWSAASGKSVEL 72
BLAST of mRNA_P-wetherbeei_contig7021.3.1 vs. uniprot
Match: A0A024GKA2_9STRA (HMA domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GKA2_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.790e-20 Identity = 44/84 (52.38%), Postives = 58/84 (69.05%), Query Frame = 1
Query: 1 HRFSPLLPFAQAEKVTFKVGMTCEGCGNACKRILGRLDGVSEVTVDVDTKMVVVTSDGVTPPQTMLEALMKWSAASGKTVELVQ 252
H F+ A+ + V FKVGMTCEGC +AC RIL ++ GVSEV D++ K++ V +G P MLEAL KWSA SGK+VEL++
Sbjct: 22 HHFTFYDQMAEGKAVKFKVGMTCEGCSSACTRILTKIQGVSEVKCDMEEKIIEV--NGTADPNEMLEALKKWSAVSGKSVELLE 103
BLAST of mRNA_P-wetherbeei_contig7021.3.1 vs. uniprot
Match: A0A1E7FHB0_9STRA (Copper chaperone-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHB0_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.280e-19 Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 40 KVTFKVGMTCEGCGNACKRILGRLDGVSEVTVDVDTKMVVVTSDGVTPPQTMLEALMKWSAASGKTVEL 246
+ TF VGMTCEGC NA KRI +++GVS D++TK VVVT+D P+ MLE L KWS+ASGK+V L
Sbjct: 3 ETTFDVGMTCEGCANAVKRIFKKMEGVSSCETDLETKKVVVTADDSVTPEAMLEKLQKWSSASGKSVAL 71
BLAST of mRNA_P-wetherbeei_contig7021.3.1 vs. uniprot
Match: A0A1V9YG83_9STRA (HMA domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YG83_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.280e-19 Identity = 45/72 (62.50%), Postives = 53/72 (73.61%), Query Frame = 1
Query: 34 AEKVT-FKVGMTCEGCGNACKRILGRLDGVSEVTVDVDTKMVVVTSDGVTPPQTMLEALMKWSAASGKTVEL 246
A+ VT F VGMTC GC +AC+RIL ++DGV V D+D K VVVT G PQ ML AL+KWSAASGK+VEL
Sbjct: 2 ADVVTVFNVGMTCGGCSSACERILLKIDGVKSVACDIDAKTVVVT--GTADPQVMLAALLKWSAASGKSVEL 71
BLAST of mRNA_P-wetherbeei_contig7021.3.1 vs. uniprot
Match: A0A448ZPP4_9STRA (HMA domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZPP4_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.860e-19 Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 49 FKVGMTCEGCGNACKRILGRLDGVSEVTVDVDTKMVVVTSDGVTPPQTMLEALMKWSAASGKTVEL 246
F +GMTC+GC NA KRIL ++DGV+++ DV+ K VVT D PP MLE L+KWS+ASGK+V L
Sbjct: 6 FDIGMTCDGCANAVKRILMKMDGVTDIVTDVEAKSAVVTHDESVPPSLMLEKLLKWSSASGKSVAL 71
BLAST of mRNA_P-wetherbeei_contig7021.3.1 vs. uniprot
Match: A0A7S4MV96_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MV96_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 6.230e-19 Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 1
Query: 49 FKVGMTCEGCGNACKRILGRLDGVSEVTVDVDTKMVVVTSDGVTPPQTMLEALMKWSAASGKTVELVQ 252
F+VGMTC+GC NA KRILG++DGVS V +V+ K VVVT+D P+ MLE L KW A+GK+V L Q
Sbjct: 51 FEVGMTCDGCANAVKRILGKIDGVSNVDTNVEAKTVVVTADDSISPEFMLEKLQKWGNAAGKSVALAQ 118
BLAST of mRNA_P-wetherbeei_contig7021.3.1 vs. uniprot
Match: A0A1Z5KFX7_FISSO (HMA domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFX7_FISSO) HSP 1 Score: 80.5 bits (197), Expect = 3.070e-18 Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 49 FKVGMTCEGCGNACKRILGRLDGVSEVTVDVDTKMVVVTSDGVTPPQTMLEALMKWSAASGKTVEL 246
F VGMTCEGC A KRILG+++GVS++ DV K+V+V +D P+ MLE L KW A+GKTVEL
Sbjct: 6 FNVGMTCEGCAAAVKRILGKIEGVSDIDTDVANKIVIVQADESVTPEMMLEKLEKWGQAAGKTVEL 71
BLAST of mRNA_P-wetherbeei_contig7021.3.1 vs. uniprot
Match: A0A024U6W9_9STRA (HMA domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6W9_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 3.120e-18 Identity = 44/74 (59.46%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 34 AEKVT-FKVGMTCEGCGNACKRILGRLDGVSEVTVDVDTKMVVVTSDGVTPPQTMLEALMKWSAASGKTVELVQ 252
A+ VT FKVGMTCEGC AC+RIL ++ GV+ V+ D+ + V+VT G P MLEAL+KWS ASGK+VELVQ
Sbjct: 69 ADVVTEFKVGMTCEGCSGACERILKKIAGVTSVSCDIPGQQVLVT--GTADPAVMLEALLKWSKASGKSVELVQ 140
BLAST of mRNA_P-wetherbeei_contig7021.3.1 vs. uniprot
Match: A0A6A3XNT5_9STRA (HMA domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XNT5_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 3.130e-18 Identity = 42/83 (50.60%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 1 HRFSPLLPFAQAEKVT-FKVGMTCEGCGNACKRILGRLDGVSEVTVDVDTKMVVVTSDGVTPPQTMLEALMKWSAASGKTVEL 246
H+F P + KVT FKVGMTC+GC +AC RIL +++GV+ V DV+ + ++V D MLEAL+KWS ASGK+VEL
Sbjct: 32 HKFDPQTTRSNMVKVTEFKVGMTCDGCSSACTRILNKIEGVTSVKCDVEKQQILVEGDA--DENAMLEALLKWSKASGKSVEL 112 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7021.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7021.3.1 >prot_P-wetherbeei_contig7021.3.1 ID=prot_P-wetherbeei_contig7021.3.1|Name=mRNA_P-wetherbeei_contig7021.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=85bp HRFSPLLPFAQAEKVTFKVGMTCEGCGNACKRILGRLDGVSEVTVDVDTKback to top mRNA from alignment at P-wetherbeei_contig7021:2559..3096- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7021.3.1 ID=mRNA_P-wetherbeei_contig7021.3.1|Name=mRNA_P-wetherbeei_contig7021.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=538bp|location=Sequence derived from alignment at P-wetherbeei_contig7021:2559..3096- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7021:2559..3096- >mRNA_P-wetherbeei_contig7021.3.1 ID=mRNA_P-wetherbeei_contig7021.3.1|Name=mRNA_P-wetherbeei_contig7021.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=255bp|location=Sequence derived from alignment at P-wetherbeei_contig7021:2559..3096- (Phaeothamnion wetherbeei SAG_119_79)back to top |