mRNA_P-wetherbeei_contig7018.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7018.1.1
Unique NamemRNA_P-wetherbeei_contig7018.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: D7FRR5_ECTSI (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR5_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 2.280e-112
Identity = 167/260 (64.23%), Postives = 209/260 (80.38%), Query Frame = 1
Query:    1 QDDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADRV 780
            QDDP K + LLEVYG+ IQLC+ T N+ LMK+VYPK + LNA+VEDPRIMGVIREQGGKMYM M NW  AYNEFYEGFRNYQEAGN  AK CLKYVVLANML LS INPFAAREAKV+ EEKEI+AM +LR+AYEGNDL +FERTL ++ N+I +DPFVM Y+ PLR+R+ E VL+ L +PY+KIT+ F+A EL L   EVE LLI +ILD R+ G+IDQ+EG+LLL     + +++++DA+ RW+++L  L++ +A RV
Sbjct:   97 QDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARV 356          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A6H5JKQ1_9PHAE (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ1_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 6.150e-111
Identity = 166/260 (63.85%), Postives = 211/260 (81.15%), Query Frame = 1
Query:    1 QDDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADRV 780
            QDDP K + LLEVYG+ IQLC+ T N+ LMK+VYPK + LNA+VEDPRIMGVIREQGGKMYM M NW  AYNEFYEGFRNYQEAGN  AK CLKYVVLANML LS INPFAAREAKV+ EEKEI+AM +LR+AYEGNDL +FERTL ++ N+I +DPFVM Y+ PLR+R+ E VL+ L +PY+KIT+ F+A EL L   EVE LLI++ILD R+ G+I+Q+EG+LLL   + + +++++DA+ RW+++L  L++ +A RV
Sbjct:  189 QDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTTEVEKLLINLILDRRLNGKINQIEGFLLLDGPQETATSRKHDAMERWSNSLRSLSSFVAARV 448          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A6V1ITC2_HETAK (COP9 signalosome complex subunit 2 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1ITC2_HETAK)

HSP 1 Score: 335 bits (860), Expect = 8.450e-111
Identity = 162/261 (62.07%), Postives = 210/261 (80.46%), Query Frame = 1
Query:    4 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADRVSV 786
            DDP K + LLEVY L IQLC+ T+N+A M++VYPK + LNAAV DPRIMGVIRE+GGKM+M    W  AYNEFYEGFR++QEAGNA A++CLKYVVLANMLALSDINPFAAREAKVY E++EI AM  LR AY+ N+L +FERTLR   N+ILDDPF+M YI+PLR +M EQVL++LV+PY K+++ F+++ELK+  +EVE L+++MILD R  G+IDQ+ G L+LG  + S++ K+Y+A+ RW+DAL GL  AL  ++ V
Sbjct:  189 DDPAKGTSLLEVYALEIQLCTATRNAARMREVYPKTLNLNAAVADPRIMGVIREEGGKMHMAAGRWAEAYNEFYEGFRSHQEAGNARARDCLKYVVLANMLALSDINPFAAREAKVYQEDREITAMMALRQAYDANELAKFERTLREDRNRILDDPFIMSYIEPLRHKMREQVLISLVQPYNKVSMKFLSQELKMEGKEVEQLIVNMILDGRFEGKIDQINGVLVLGGQKQSIATKKYEALQRWSDALEGLRNALPQKIQV 449          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A7S2BKS2_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKS2_9STRA)

HSP 1 Score: 333 bits (855), Expect = 1.010e-109
Identity = 166/260 (63.85%), Postives = 207/260 (79.62%), Query Frame = 1
Query:    4 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADRVS 783
            DDP K +YLLEVY L IQLC+ TK+S+ MKQ+YPK + LNAAV DPRIMGVIRE+GGKMYM    WD AYNEFYEGFR +QEAGN  AK+ LKYVVLANMLALS+INPF+AREA  Y E+ EI+AMR LR AYE NDL  FE+TL +++NKI+ DPF+M Y++PLRRRM EQVLLAL+RPY++I + FVA+ELKL    VE LL+ MI+D+RI G+IDQ++G+LLL   + S+S+K+YDA+ +W   L  LT  L+ RV+
Sbjct:  214 DDPTKGTYLLEVYALEIQLCTATKSSSRMKQIYPKTLNLNAAVADPRIMGVIREEGGKMYMSESRWDDAYNEFYEGFRGFQEAGNPRAKDALKYVVLANMLALSEINPFSAREAIAYQEDPEIVAMRNLRSAYEANDLGSFEKTLLDKSNKIIADPFIMTYVEPLRRRMREQVLLALLRPYKRIRIEFVAQELKLEVMAVELLLVDMIMDKRIDGKIDQIQGFLLLSGDQTSVSSKKYDALEKWCTTLESLTNNLSARVT 473          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A7S2W4K8_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4K8_9STRA)

HSP 1 Score: 333 bits (855), Expect = 1.950e-109
Identity = 168/256 (65.62%), Postives = 206/256 (80.47%), Query Frame = 1
Query:    4 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALA 771
            DDP K +YLLEVY L IQLC+ TK++A MK +YPK + LNAAV DPRIMGVIRE+GGKMYM    W+ AYNEFYEGFR YQEAGN  AK+ LKYVVLANMLALSDINPFAAREA  + EEKEI+AMR LR AYE NDL  FE TL++++N+IL+DPF+M Y+ PLRRRM EQVLLALVRPY +I L+F+AREL+L  EEVE L++ MIL+ R++G+IDQ++G+LLLGD    L+ K++DA+A WA +L  L   L+
Sbjct:  236 DDPAKGTYLLEVYALEIQLCTATKDTARMKALYPKTLNLNAAVADPRIMGVIREEGGKMYMAEGRWNEAYNEFYEGFRGYQEAGNPRAKDALKYVVLANMLALSDINPFAAREAIAFQEEKEIVAMRSLRTAYEANDLTTFESTLKDKSNRILEDPFIMTYVAPLRRRMREQVLLALVRPYHRIQLSFIARELELSDEEVERLVVDMILEGRVQGKIDQIKGFLLLGDRSNVLAVKKFDAMASWAKSLEALHAGLS 491          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A836CJA4_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA4_9STRA)

HSP 1 Score: 315 bits (807), Expect = 3.040e-103
Identity = 159/261 (60.92%), Postives = 198/261 (75.86%), Query Frame = 1
Query:    4 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADRVSV 786
            DD  K +YLLEVYGL+IQLC+ TK++A M++VYP++M+LNA                 MYM    W  AYNEFYEGFRNYQEAGN  AK+CLKYVVLANMLALSDINPFAAREAKVY EEKE+ AM ELR+AYE NDL RFE+TL+N+ N+ILDD F+M Y++PL+RRM EQVLLA+VRPY +I LAF+AREL LP   VE LL+ +ILDER+ G IDQ++G+L +G+  A  S K+Y+A+  W+D L   TTAL  R+++
Sbjct:  166 DDQSKGTYLLEVYGLIIQLCTATKDTARMREVYPRVMQLNA-----------------MYMATGQWSMAYNEFYEGFRNYQEAGNKRAKDCLKYVVLANMLALSDINPFAAREAKVYQEEKEVAAMMELRMAYETNDLARFEKTLQNKANRILDDNFIMAYVEPLKRRMREQVLLAIVRPYRRINLAFMARELNLPEPAVEGLLVELILDERLSGSIDQLQGFLQVGEDDADNSPKKYEALMGWSDELRKATTALTSRIAL 409          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A7S3M6V7_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6V7_9STRA)

HSP 1 Score: 299 bits (766), Expect = 1.380e-97
Identity = 156/268 (58.21%), Postives = 199/268 (74.25%), Query Frame = 1
Query:    4 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLL--------GDGRASLSNKR------------YDAIARWADAL 747
            DD  K + LLE+Y L IQLC+V+ NS  MKQ+YPK M LNAAV DPRIMG+IRE+GGKM M   NW+ AYNE YE FRNYQEAGNA A++ LKYVV+A+ML +SDINPFAAREAKV+ ++KEI+AM +LR   E NDL RFERT++N+ NKILD+PF+M YI PLRRRM EQVLL L RPY+K+T+AF+AREL L  +EVESLL+ MILD+++   IDQ++G+++L          G+AS + +             + +I +WADAL
Sbjct:   96 DDLSKGTLLLEIYCLEIQLCAVSHNSLRMKQIYPKTMNLNAAVADPRIMGIIREEGGKMQMSEGNWEDAYNELYESFRNYQEAGNARARDILKYVVVASMLTVSDINPFAAREAKVFSDDKEIVAMSDLRQCLEANDLARFERTIKNKQNKILDEPFLMTYIQPLRRRMREQVLLNLTRPYKKVTVAFLARELALNVDEVESLLVDMILDQKLSAHIDQIKGHVILEQSATADGASGQASSAGQNLSRNSQNAQDALFASINKWADAL 363          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: W7U093_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U093_9STRA)

HSP 1 Score: 290 bits (743), Expect = 4.630e-93
Identity = 147/249 (59.04%), Postives = 197/249 (79.12%), Query Frame = 1
Query:    4 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLG-DGRASLSNKRYDAIARWADAL 747
            DD  K++YL+EVY L I  C+ T + A MK++ P+ ++LNAAV DPRIMG+IRE+GGK++M    W  AY+EF EGFR YQEAGN+ AK+CLKY  L+N+LA S INPFAA EAKVY +++E+MAM ELR+AY+ NDL RFERTL ++ N ILDD F+  YI+ LRRRM EQVLL++ +PY K+TLA VA+EL+L  EE+ESLL+ +ILD+RI+G+IDQ+ G++LL  +GR+S  + ++ A+ARWADAL
Sbjct:  191 DDESKATYLMEVYALEISYCTHTCDMARMKEILPRTLKLNAAVSDPRIMGIIREEGGKLHMRQCQWSDAYSEFNEGFRAYQEAGNSRAKQCLKYAALSNILANSSINPFAATEAKVYQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGGFVLLRPEGRSS--SGKHAALARWADAL 437          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A7R9YB37_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YB37_9STRA)

HSP 1 Score: 288 bits (738), Expect = 1.960e-92
Identity = 142/260 (54.62%), Postives = 193/260 (74.23%), Query Frame = 1
Query:    4 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDG-RASLSNKRYDAIARWADALGGLTTALADRV 780
            DD  K SYLLE Y L IQLC+ T N++ MK++YPK   LNAAV DPRIMG+IRE+GGKM+MG+ +W  AYNEFY  FRNYQE GN  AK CLKYVVL+NMLALSDINPFAAREAKV+ +++EIMAM +LR+AYE +D++ F+R L+N++NKIL+D ++  +++ LR RM E VLLA+V+PY +I +  VA+EL + ++ VE +++++ILD R++GRIDQV G ++L  G  A    K Y+ +  W  AL      +  +V
Sbjct:  185 DDLPKGSYLLEAYALEIQLCTQTHNTSRMKEIYPKTEALNAAVADPRIMGIIREEGGKMFMGLGSWSEAYNEFYAAFRNYQEGGNPRAKTCLKYVVLSNMLALSDINPFAAREAKVFQDDREIMAMMDLRMAYESSDMQGFDRILQNKSNKILEDEYLKMFVERLRNRMRESVLLAMVKPYVRIEMRSVAQELNIESDAVEKIVVNLILDGRVKGRIDQVHGCIILDKGTEAQTVGKEYEGLRGWCKALHDFNEHICAKV 444          
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A7S4ECH3_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECH3_9STRA)

HSP 1 Score: 288 bits (736), Expect = 4.400e-92
Identity = 144/258 (55.81%), Postives = 192/258 (74.42%), Query Frame = 1
Query:    4 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADR 777
            DD  K + LLE Y L I LC+ T+++  MK++YP+ + LNAAV DPRIMGVIRE+GG+M+M   N+  AYNEFY GFR YQEAGN+ AK+CLKYVVLANMLALSDINPF AREAK Y EE E+ AMR LR++Y+ NDL +FE TL ++ N I  DPF+M+Y+DPLRRRM EQVLL+LV+PY ++ L F+A +L+L   +VE ++++MILD+RI G +D +E +L+L         K++  +A+WA AL  L   +A+R
Sbjct:  193 DDSSKGTSLLEAYALEISLCAATRDARRMKRIYPRTLNLNAAVADPRIMGVIREEGGRMHMRDANFAEAYNEFYAGFRAYQEAGNSRAKDCLKYVVLANMLALSDINPFDAREAKAYQEETEVAAMRRLRVSYDANDLRQFETTLTDKRNNIQSDPFLMEYVDPLRRRMREQVLLSLVKPYRRVKLDFLAGKLQLSESDVEQIVVAMILDDRIEGEVDMLEKHLVLSGKE---EGKKHRELAKWAGALESLAKGMANR 447          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRR5_ECTSI2.280e-11264.23COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A6H5JKQ1_9PHAE6.150e-11163.85COP9 signalosome complex subunit 2 n=1 Tax=Ectocar... [more]
A0A6V1ITC2_HETAK8.450e-11162.07COP9 signalosome complex subunit 2 n=1 Tax=Heteros... [more]
A0A7S2BKS2_9STRA1.010e-10963.85COP9 signalosome complex subunit 2 n=1 Tax=Dictyoc... [more]
A0A7S2W4K8_9STRA1.950e-10965.63COP9 signalosome complex subunit 2 n=2 Tax=Rhizoch... [more]
A0A836CJA4_9STRA3.040e-10360.92COP9 signalosome complex subunit 2 n=1 Tax=Tribone... [more]
A0A7S3M6V7_9STRA1.380e-9758.21COP9 signalosome complex subunit 2 n=1 Tax=Spumell... [more]
W7U093_9STRA4.630e-9359.04COP9 signalosome complex subunit 2 n=2 Tax=Monodop... [more]
A0A7R9YB37_9STRA1.960e-9254.62COP9 signalosome complex subunit 2 n=1 Tax=Pinguio... [more]
A0A7S4ECH3_9STRA4.400e-9255.81COP9 signalosome complex subunit 2 n=1 Tax=Pelagom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7018contigP-wetherbeei_contig7018:596..3107 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FRR5
Preferred nameCOPS2
PFAMsPCI
Model size789
Max annot lvl2759|Eukaryota
KEGG koko:K12176
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000338,GO:0000715,GO:0000909,GO:0002009,GO:0003006,GO:0003674,GO:0003712,GO:0003714,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007282,GO:0007283,GO:0007292,GO:0007293,GO:0007399,GO:0007517,GO:0007519,GO:0008134,GO:0008150,GO:0008152,GO:0008180,GO:0008230,GO:0008231,GO:0008283,GO:0008356,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009653,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0014706,GO:0016043,GO:0016070,GO:0016333,GO:0016922,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019827,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0023052,GO:0030154,GO:0030163,GO:0030182,GO:0030582,GO:0030584,GO:0030718,GO:0030727,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031647,GO:0031935,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032991,GO:0033043,GO:0033044,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035257,GO:0035914,GO:0036099,GO:0036211,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043235,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044798,GO:0045892,GO:0045934,GO:0046483,GO:0046983,GO:0048134,GO:0048135,GO:0048138,GO:0048140,GO:0048142,GO:0048232,GO:0048468,GO:0048477,GO:0048513,GO:0048519,GO:0048523,GO:0048608,GO:0048609,GO:0048646,GO:0048699,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051301,GO:0051427,GO:0051704,GO:0051716,GO:0060255,GO:0060429,GO:0060537,GO:0060538,GO:0060968,GO:0061061,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0070646,GO:0070647,GO:0070791,GO:0071704,GO:0071840,GO:0075259,GO:0080090,GO:0090052,GO:0090054,GO:0090304,GO:0090575,GO:0097659,GO:0098727,GO:0140110,GO:1901360,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1902275,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
Exons5
Evalue3.74e-113
EggNOG OGsCOG5159@1|root,KOG1464@2759|Eukaryota
Ec32 ortholog descriptionPCI domain protein
Ec32 orthologEc-00_003560.1
Descriptionprotein deneddylation
Cds size789
COG categoryO
BRITEko00000,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186952.5903509-CDS-P-wetherbeei_contig7018:595..8081683186952.5903509-CDS-P-wetherbeei_contig7018:595..808Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7018 596..808 -
1683186952.6073642-CDS-P-wetherbeei_contig7018:1351..15771683186952.6073642-CDS-P-wetherbeei_contig7018:1351..1577Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7018 1352..1577 -
1683186952.6165595-CDS-P-wetherbeei_contig7018:1948..20521683186952.6165595-CDS-P-wetherbeei_contig7018:1948..2052Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7018 1949..2052 -
1683186952.6261075-CDS-P-wetherbeei_contig7018:2373..25231683186952.6261075-CDS-P-wetherbeei_contig7018:2373..2523Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7018 2374..2523 -
1683186952.636183-CDS-P-wetherbeei_contig7018:3011..31071683186952.636183-CDS-P-wetherbeei_contig7018:3011..3107Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7018 3012..3107 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7018.1.1prot_P-wetherbeei_contig7018.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7018 596..3107 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7018.1.1

>prot_P-wetherbeei_contig7018.1.1 ID=prot_P-wetherbeei_contig7018.1.1|Name=mRNA_P-wetherbeei_contig7018.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=263bp
QDDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIM
GVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLAN
MLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRT
NKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEE
VESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALG
GLTTALADRVSV*
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mRNA from alignment at P-wetherbeei_contig7018:596..3107-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7018.1.1 ID=mRNA_P-wetherbeei_contig7018.1.1|Name=mRNA_P-wetherbeei_contig7018.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2512bp|location=Sequence derived from alignment at P-wetherbeei_contig7018:596..3107- (Phaeothamnion wetherbeei SAG_119_79)
CAGGACGACCCGCAGAAGAGTAGCTACCTGCTGGAGGTGTACGGGCTCGT GATCCAGCTGTGCAGCGTTACCAAGAATAGCGCCCTCATGAAGCAGGTAA GGAAAAAGAGAGAAAGAGGAAGAAAAAGAAGCGTGTTCTGTTGGAACTTC TCTTCGCAGAAAAGCGTTTAAGGGCATAGATAGGTCTGATTGCCTTTGGC TATTCGGCGTTTCCTGCGAAACTTGCTCCTCCTTAGTGTGCTTGTGATCA TCATATTCCGGTGGCCGGAGGGTTATCATAGCGGTATCGCTTGCTCTGCC ACCGCGCTGATGCTGGTCTTTCTGAAAGGCGCCACTTTTCGTTGGGCGCA AGCAAAGGGACAGCAGGGGGTTCGGAATGCGGACCTGTTTGTTGATCTCT TTTCTTCGAGTTCCTTGCTGCCGCGCTACCCGCACCGCCCCTTCCGACTG CACGCACCCCATTACTTCACTCCCCATGGTCTTGCCTGCTCGAAAAAAAT TGGGAACACAAACAAACGGCAACACAAACGATCGGCAAACGGACACGGGA AACAACACAAATCCATCTATCTGCGAAAAAACAGGTGTACCCGAAGATAA TGCGGCTGAATGCGGCGGTGGAGGACCCGCGCATCATGGGCGTGATCCGC GAGCAGGGCGGCAAGATGTACATGGGCATGGAAAATTGGGACGCGGCCTA CAACGAGTTCTACGAGGGATTCCGCAACTACCAGGTCAGCACGCATCGAA AGCCAGAGAAAACATTAAGTGATTCTGAATTCTGTGGAATGTCTTCCTAT CGTCCGATTATCACCTTTTTAGTGAGTACAGGGCTTGTTCGCTCCGCTTC GCGACGGCAACTATGGGGTGGCACGCCGCAAGATGTGGGAATGGACTGGC AGCAGAGTTAGTTAGCCATTGTGGACTTCTCTGCCGCTACCTCTTCTTTC CTGTCCCAAGTCACCCCCTCTCTCCATCCACTAAATCAATGATGAACTGA TTAATCACCATGCCAAAAAATGAAATGAAACAAATTTTACCATCACATCT GCCAGGAGGCGGGCAACGCCGCCGCCAAGGAGTGCCTCAAGTACGTGGTG CTGGCCAACATGCTGGCGCTCTCCGACATTAACCCCTTCGCGGCGCGCGA GGCCAAAGTGTGAGTCTGTTTTGCGAGAAGGGCGGGGCGACAAGGACGGT TTCTTTGTCTTCCGTATCAATTACTTCCTCTTTGGGGGTGGGAAGAGAAC GGGCGGTAGAGGGAAAGAGGGACGGAGGCGGGAAGAGCAAGCGGGGGACT GGGCTAGGCTGTGCTGGGGTAACTACTGCATGGCTTAATGTAGTTTTGGC CTTTCGTTTTCTTTGGGCTGTGCAAAGAATTAGATCTCCGGTTGTGCCGC CTGGATCGCCACCTGTCGCCGCGGCTGGTCGCCGCCCCGAACCCGCCCGT TGTCTTATTCGCCCCGAAAAGTTGCTCCTTCATGAAAAAACTTGGCATCC AAAAACCATGTTGTCGCAACTGCTGTTCAGGTACATGGAGGAGAAGGAAA TCATGGCGATGCGGGAGCTACGGCTGGCCTACGAGGGAAACGACCTCGAG CGCTTCGAACGCACGCTGCGCAACCGCACCAACAAGATATTGGACGACCC TTTCGTCATGAAGTACATCGACCCACTGCGGCGCCGCATGCATGAGCAGG TGCTGCTAGCGCTCGTGCGCCCCTACGAGAAGATTACGCTCGCCTTCGTC GCCCGGGTGAGCGAGCCAGCCGGTGCCGCCCCGCCCGGCCGGCGGTTGAT TTCTGGCCGTCTTCTGTGTTTCCATCACGGTTTTGTGGTTCTCTCCACTT TCCACCTTTCTGGTATGTTTTTTCGTGGGCAGGTCCAATTCCTCTTCTTT CCGTGACGTGCAAGGGTGGCGCCAGATGCTTTTGCGGCCGCCTTCATCCA CTCTGGTGTCTTTTGCTGGTGCCGTCTCAATGGATCTTCTTCATAGTTTT CCGTCTCACGTGTTTTTCTTCACACTTTCCTTGTGTCCTTGTTGTCTCTT CCAGACGACGTCTTCGTCAGAGATGCCCTTTGTAACCGTCTTGTCGTTTC GGTTTGTGCGTCTCACCAAGTTTCCACATCATCCTTCCTCTCTTTTCCGG TCTCTCGTCTTGCCGCGTTTCATCCCCTCCCTCTTCACTTCCCCATCGCC GCCACCGCCCGCCGTTCGCCGCGGTTGCCCCGTTCACTGCCTGCCGCCGC CCGCCACCTGTCGTCGCCGCTGGCCAATCGCTATCGCCACTCGAACCAGG AGCTGAAGCTGCCGGCTGAGGAGGTGGAGTCGCTGCTCATCTCCATGATC CTCGACGAGCGTATCCGCGGCCGCATCGACCAGGTGGAAGGGTACCTGCT GCTGGGCGACGGCCGTGCGTCGCTCTCCAACAAGCGGTACGACGCCATCG CCCGCTGGGCCGACGCGCTCGGCGGCCTCACCACGGCGCTCGCCGACCGT GTCAGCGTCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7018:596..3107-

>mRNA_P-wetherbeei_contig7018.1.1 ID=mRNA_P-wetherbeei_contig7018.1.1|Name=mRNA_P-wetherbeei_contig7018.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig7018:596..3107- (Phaeothamnion wetherbeei SAG_119_79)
CAGGACGACCCGCAGAAGAGTAGCTACCTGCTGGAGGTGTACGGGCTCGT
GATCCAGCTGTGCAGCGTTACCAAGAATAGCGCCCTCATGAAGCAGGTGT
ACCCGAAGATAATGCGGCTGAATGCGGCGGTGGAGGACCCGCGCATCATG
GGCGTGATCCGCGAGCAGGGCGGCAAGATGTACATGGGCATGGAAAATTG
GGACGCGGCCTACAACGAGTTCTACGAGGGATTCCGCAACTACCAGGAGG
CGGGCAACGCCGCCGCCAAGGAGTGCCTCAAGTACGTGGTGCTGGCCAAC
ATGCTGGCGCTCTCCGACATTAACCCCTTCGCGGCGCGCGAGGCCAAAGT
GTACATGGAGGAGAAGGAAATCATGGCGATGCGGGAGCTACGGCTGGCCT
ACGAGGGAAACGACCTCGAGCGCTTCGAACGCACGCTGCGCAACCGCACC
AACAAGATATTGGACGACCCTTTCGTCATGAAGTACATCGACCCACTGCG
GCGCCGCATGCATGAGCAGGTGCTGCTAGCGCTCGTGCGCCCCTACGAGA
AGATTACGCTCGCCTTCGTCGCCCGGGAGCTGAAGCTGCCGGCTGAGGAG
GTGGAGTCGCTGCTCATCTCCATGATCCTCGACGAGCGTATCCGCGGCCG
CATCGACCAGGTGGAAGGGTACCTGCTGCTGGGCGACGGCCGTGCGTCGC
TCTCCAACAAGCGGTACGACGCCATCGCCCGCTGGGCCGACGCGCTCGGC
GGCCTCACCACGGCGCTCGCCGACCGTGTCAGCGTCTGA
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