mRNA_P-wetherbeei_contig7018.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: D7FRR5_ECTSI (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR5_ECTSI) HSP 1 Score: 336 bits (862), Expect = 2.280e-112 Identity = 167/260 (64.23%), Postives = 209/260 (80.38%), Query Frame = 1
Query: 1 QDDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADRV 780
QDDP K + LLEVYG+ IQLC+ T N+ LMK+VYPK + LNA+VEDPRIMGVIREQGGKMYM M NW AYNEFYEGFRNYQEAGN AK CLKYVVLANML LS INPFAAREAKV+ EEKEI+AM +LR+AYEGNDL +FERTL ++ N+I +DPFVM Y+ PLR+R+ E VL+ L +PY+KIT+ F+A EL L EVE LLI +ILD R+ G+IDQ+EG+LLL + +++++DA+ RW+++L L++ +A RV
Sbjct: 97 QDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRSLSSFVAARV 356
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A6H5JKQ1_9PHAE (COP9 signalosome complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKQ1_9PHAE) HSP 1 Score: 336 bits (861), Expect = 6.150e-111 Identity = 166/260 (63.85%), Postives = 211/260 (81.15%), Query Frame = 1
Query: 1 QDDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADRV 780
QDDP K + LLEVYG+ IQLC+ T N+ LMK+VYPK + LNA+VEDPRIMGVIREQGGKMYM M NW AYNEFYEGFRNYQEAGN AK CLKYVVLANML LS INPFAAREAKV+ EEKEI+AM +LR+AYEGNDL +FERTL ++ N+I +DPFVM Y+ PLR+R+ E VL+ L +PY+KIT+ F+A EL L EVE LLI++ILD R+ G+I+Q+EG+LLL + + +++++DA+ RW+++L L++ +A RV
Sbjct: 189 QDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTTEVEKLLINLILDRRLNGKINQIEGFLLLDGPQETATSRKHDAMERWSNSLRSLSSFVAARV 448
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A6V1ITC2_HETAK (COP9 signalosome complex subunit 2 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1ITC2_HETAK) HSP 1 Score: 335 bits (860), Expect = 8.450e-111 Identity = 162/261 (62.07%), Postives = 210/261 (80.46%), Query Frame = 1
Query: 4 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADRVSV 786
DDP K + LLEVY L IQLC+ T+N+A M++VYPK + LNAAV DPRIMGVIRE+GGKM+M W AYNEFYEGFR++QEAGNA A++CLKYVVLANMLALSDINPFAAREAKVY E++EI AM LR AY+ N+L +FERTLR N+ILDDPF+M YI+PLR +M EQVL++LV+PY K+++ F+++ELK+ +EVE L+++MILD R G+IDQ+ G L+LG + S++ K+Y+A+ RW+DAL GL AL ++ V
Sbjct: 189 DDPAKGTSLLEVYALEIQLCTATRNAARMREVYPKTLNLNAAVADPRIMGVIREEGGKMHMAAGRWAEAYNEFYEGFRSHQEAGNARARDCLKYVVLANMLALSDINPFAAREAKVYQEDREITAMMALRQAYDANELAKFERTLREDRNRILDDPFIMSYIEPLRHKMREQVLISLVQPYNKVSMKFLSQELKMEGKEVEQLIVNMILDGRFEGKIDQINGVLVLGGQKQSIATKKYEALQRWSDALEGLRNALPQKIQV 449
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A7S2BKS2_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKS2_9STRA) HSP 1 Score: 333 bits (855), Expect = 1.010e-109 Identity = 166/260 (63.85%), Postives = 207/260 (79.62%), Query Frame = 1
Query: 4 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADRVS 783
DDP K +YLLEVY L IQLC+ TK+S+ MKQ+YPK + LNAAV DPRIMGVIRE+GGKMYM WD AYNEFYEGFR +QEAGN AK+ LKYVVLANMLALS+INPF+AREA Y E+ EI+AMR LR AYE NDL FE+TL +++NKI+ DPF+M Y++PLRRRM EQVLLAL+RPY++I + FVA+ELKL VE LL+ MI+D+RI G+IDQ++G+LLL + S+S+K+YDA+ +W L LT L+ RV+
Sbjct: 214 DDPTKGTYLLEVYALEIQLCTATKSSSRMKQIYPKTLNLNAAVADPRIMGVIREEGGKMYMSESRWDDAYNEFYEGFRGFQEAGNPRAKDALKYVVLANMLALSEINPFSAREAIAYQEDPEIVAMRNLRSAYEANDLGSFEKTLLDKSNKIIADPFIMTYVEPLRRRMREQVLLALLRPYKRIRIEFVAQELKLEVMAVELLLVDMIMDKRIDGKIDQIQGFLLLSGDQTSVSSKKYDALEKWCTTLESLTNNLSARVT 473
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A7S2W4K8_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4K8_9STRA) HSP 1 Score: 333 bits (855), Expect = 1.950e-109 Identity = 168/256 (65.62%), Postives = 206/256 (80.47%), Query Frame = 1
Query: 4 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALA 771
DDP K +YLLEVY L IQLC+ TK++A MK +YPK + LNAAV DPRIMGVIRE+GGKMYM W+ AYNEFYEGFR YQEAGN AK+ LKYVVLANMLALSDINPFAAREA + EEKEI+AMR LR AYE NDL FE TL++++N+IL+DPF+M Y+ PLRRRM EQVLLALVRPY +I L+F+AREL+L EEVE L++ MIL+ R++G+IDQ++G+LLLGD L+ K++DA+A WA +L L L+
Sbjct: 236 DDPAKGTYLLEVYALEIQLCTATKDTARMKALYPKTLNLNAAVADPRIMGVIREEGGKMYMAEGRWNEAYNEFYEGFRGYQEAGNPRAKDALKYVVLANMLALSDINPFAAREAIAFQEEKEIVAMRSLRTAYEANDLTTFESTLKDKSNRILEDPFIMTYVAPLRRRMREQVLLALVRPYHRIQLSFIARELELSDEEVERLVVDMILEGRVQGKIDQIKGFLLLGDRSNVLAVKKFDAMASWAKSLEALHAGLS 491
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A836CJA4_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJA4_9STRA) HSP 1 Score: 315 bits (807), Expect = 3.040e-103 Identity = 159/261 (60.92%), Postives = 198/261 (75.86%), Query Frame = 1
Query: 4 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADRVSV 786
DD K +YLLEVYGL+IQLC+ TK++A M++VYP++M+LNA MYM W AYNEFYEGFRNYQEAGN AK+CLKYVVLANMLALSDINPFAAREAKVY EEKE+ AM ELR+AYE NDL RFE+TL+N+ N+ILDD F+M Y++PL+RRM EQVLLA+VRPY +I LAF+AREL LP VE LL+ +ILDER+ G IDQ++G+L +G+ A S K+Y+A+ W+D L TTAL R+++
Sbjct: 166 DDQSKGTYLLEVYGLIIQLCTATKDTARMREVYPRVMQLNA-----------------MYMATGQWSMAYNEFYEGFRNYQEAGNKRAKDCLKYVVLANMLALSDINPFAAREAKVYQEEKEVAAMMELRMAYETNDLARFEKTLQNKANRILDDNFIMAYVEPLKRRMREQVLLAIVRPYRRINLAFMARELNLPEPAVEGLLVELILDERLSGSIDQLQGFLQVGEDDADNSPKKYEALMGWSDELRKATTALTSRIAL 409
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A7S3M6V7_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6V7_9STRA) HSP 1 Score: 299 bits (766), Expect = 1.380e-97 Identity = 156/268 (58.21%), Postives = 199/268 (74.25%), Query Frame = 1
Query: 4 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLL--------GDGRASLSNKR------------YDAIARWADAL 747
DD K + LLE+Y L IQLC+V+ NS MKQ+YPK M LNAAV DPRIMG+IRE+GGKM M NW+ AYNE YE FRNYQEAGNA A++ LKYVV+A+ML +SDINPFAAREAKV+ ++KEI+AM +LR E NDL RFERT++N+ NKILD+PF+M YI PLRRRM EQVLL L RPY+K+T+AF+AREL L +EVESLL+ MILD+++ IDQ++G+++L G+AS + + + +I +WADAL
Sbjct: 96 DDLSKGTLLLEIYCLEIQLCAVSHNSLRMKQIYPKTMNLNAAVADPRIMGIIREEGGKMQMSEGNWEDAYNELYESFRNYQEAGNARARDILKYVVVASMLTVSDINPFAAREAKVFSDDKEIVAMSDLRQCLEANDLARFERTIKNKQNKILDEPFLMTYIQPLRRRMREQVLLNLTRPYKKVTVAFLARELALNVDEVESLLVDMILDQKLSAHIDQIKGHVILEQSATADGASGQASSAGQNLSRNSQNAQDALFASINKWADAL 363
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: W7U093_9STRA (COP9 signalosome complex subunit 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U093_9STRA) HSP 1 Score: 290 bits (743), Expect = 4.630e-93 Identity = 147/249 (59.04%), Postives = 197/249 (79.12%), Query Frame = 1
Query: 4 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLG-DGRASLSNKRYDAIARWADAL 747
DD K++YL+EVY L I C+ T + A MK++ P+ ++LNAAV DPRIMG+IRE+GGK++M W AY+EF EGFR YQEAGN+ AK+CLKY L+N+LA S INPFAA EAKVY +++E+MAM ELR+AY+ NDL RFERTL ++ N ILDD F+ YI+ LRRRM EQVLL++ +PY K+TLA VA+EL+L EE+ESLL+ +ILD+RI+G+IDQ+ G++LL +GR+S + ++ A+ARWADAL
Sbjct: 191 DDESKATYLMEVYALEISYCTHTCDMARMKEILPRTLKLNAAVSDPRIMGIIREEGGKLHMRQCQWSDAYSEFNEGFRAYQEAGNSRAKQCLKYAALSNILANSSINPFAATEAKVYQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGGFVLLRPEGRSS--SGKHAALARWADAL 437
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A7R9YB37_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YB37_9STRA) HSP 1 Score: 288 bits (738), Expect = 1.960e-92 Identity = 142/260 (54.62%), Postives = 193/260 (74.23%), Query Frame = 1
Query: 4 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDG-RASLSNKRYDAIARWADALGGLTTALADRV 780
DD K SYLLE Y L IQLC+ T N++ MK++YPK LNAAV DPRIMG+IRE+GGKM+MG+ +W AYNEFY FRNYQE GN AK CLKYVVL+NMLALSDINPFAAREAKV+ +++EIMAM +LR+AYE +D++ F+R L+N++NKIL+D ++ +++ LR RM E VLLA+V+PY +I + VA+EL + ++ VE +++++ILD R++GRIDQV G ++L G A K Y+ + W AL + +V
Sbjct: 185 DDLPKGSYLLEAYALEIQLCTQTHNTSRMKEIYPKTEALNAAVADPRIMGIIREEGGKMFMGLGSWSEAYNEFYAAFRNYQEGGNPRAKTCLKYVVLSNMLALSDINPFAAREAKVFQDDREIMAMMDLRMAYESSDMQGFDRILQNKSNKILEDEYLKMFVERLRNRMRESVLLAMVKPYVRIEMRSVAQELNIESDAVEKIVVNLILDGRVKGRIDQVHGCIILDKGTEAQTVGKEYEGLRGWCKALHDFNEHICAKV 444
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Match: A0A7S4ECH3_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECH3_9STRA) HSP 1 Score: 288 bits (736), Expect = 4.400e-92 Identity = 144/258 (55.81%), Postives = 192/258 (74.42%), Query Frame = 1
Query: 4 DDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMGVIREQGGKMYMGMENWDAAYNEFYEGFRNYQEAGNAAAKECLKYVVLANMLALSDINPFAAREAKVYMEEKEIMAMRELRLAYEGNDLERFERTLRNRTNKILDDPFVMKYIDPLRRRMHEQVLLALVRPYEKITLAFVARELKLPAEEVESLLISMILDERIRGRIDQVEGYLLLGDGRASLSNKRYDAIARWADALGGLTTALADR 777
DD K + LLE Y L I LC+ T+++ MK++YP+ + LNAAV DPRIMGVIRE+GG+M+M N+ AYNEFY GFR YQEAGN+ AK+CLKYVVLANMLALSDINPF AREAK Y EE E+ AMR LR++Y+ NDL +FE TL ++ N I DPF+M+Y+DPLRRRM EQVLL+LV+PY ++ L F+A +L+L +VE ++++MILD+RI G +D +E +L+L K++ +A+WA AL L +A+R
Sbjct: 193 DDSSKGTSLLEAYALEISLCAATRDARRMKRIYPRTLNLNAAVADPRIMGVIREEGGRMHMRDANFAEAYNEFYAGFRAYQEAGNSRAKDCLKYVVLANMLALSDINPFDAREAKAYQEETEVAAMRRLRVSYDANDLRQFETTLTDKRNNIQSDPFLMEYVDPLRRRMREQVLLSLVKPYRRVKLDFLAGKLQLSESDVEQIVVAMILDDRIEGEVDMLEKHLVLSGKE---EGKKHRELAKWAGALESLAKGMANR 447 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7018.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7018.1.1 >prot_P-wetherbeei_contig7018.1.1 ID=prot_P-wetherbeei_contig7018.1.1|Name=mRNA_P-wetherbeei_contig7018.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=263bp QDDPQKSSYLLEVYGLVIQLCSVTKNSALMKQVYPKIMRLNAAVEDPRIMback to top mRNA from alignment at P-wetherbeei_contig7018:596..3107- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7018.1.1 ID=mRNA_P-wetherbeei_contig7018.1.1|Name=mRNA_P-wetherbeei_contig7018.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2512bp|location=Sequence derived from alignment at P-wetherbeei_contig7018:596..3107- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7018:596..3107- >mRNA_P-wetherbeei_contig7018.1.1 ID=mRNA_P-wetherbeei_contig7018.1.1|Name=mRNA_P-wetherbeei_contig7018.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig7018:596..3107- (Phaeothamnion wetherbeei SAG_119_79)back to top |