mRNA_P-wetherbeei_contig6951.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A6S9GV20_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GV20_HETAK) HSP 1 Score: 156 bits (394), Expect = 3.120e-44 Identity = 90/204 (44.12%), Postives = 116/204 (56.86%), Query Frame = 1
Query: 64 CHQFSERIESPCAKDTVKPSGYVTREYSADQLIALTDATIDGSSWDEASEQGFEKNFEYITRNE-----IPMTSPVLFRRL-------------------GGKWHVSFFVPSSFEKMEDIPKPKDPSVSIKALSKGAR-FAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEVLLQL 600
CHQ+S+ IE+PC K + Y R Y + T+A I SW + QGF KNF+YI+ IPMT+PVLFRR W VSFFVP++F D P P D V I ++ GAR +A + F GFA E D+ A+ A+L+AALA DGVA V P + EW ++AGYDSPFVLFNRHNEV +++
Sbjct: 25 CHQYSQEIEAPCVKVISRNENYEIRRYGESREDVWTNAHIASDSWSQVQSQGFYKNFDYISGGNSEEMTIPMTAPVLFRRAPXXXXXXXXXXXXXXXXXXXXXWRVSFFVPAAFPSPADAPAPLDADVEI--VTSGARTYAALLFPGFAAEADWPAREAELRAALAADGVA-VKPGDEEWGVVYAGYDSPFVLFNRHNEVWIEV 225
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A835ZHJ2_9STRA (SOUL heme-binding protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHJ2_9STRA) HSP 1 Score: 154 bits (389), Expect = 4.480e-43 Identity = 86/210 (40.95%), Postives = 119/210 (56.67%), Query Frame = 1
Query: 64 CHQFSERIESPCAKDTVKPSGYVTREYSADQLIALTDATIDGSSWDEASEQGFEKNFEYIT----RNE-IPMTSPVLFRRL-------------------GGK-------WHVSFFVPSSFEKMEDIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEVLLQL 600
CHQ+S+ IESPC + +P GY R Y+A+ TDA +D + +A+ +GF KN+ YI+ +NE IPMTSPV+FR+ GG WHV FFVPS +E D+P P+ +V+I A+ GA FAV FGGFA E D+ + +L L +D V D +W +WA YDSPFV+F+RHNEV +++
Sbjct: 23 CHQYSDTIESPCNEVICRPRGYEIRRYAANNTEFFTDAFVDSDCFLKAATEGFNKNYAYISGKNSKNETIPMTSPVIFRKYNDTSGGGGNGSADETADLTGGSEHCLAHGWHVGFFVPSKYETRGDVPVPEVENVTIAAVPSGAVFAVKTFGGFASERDFNRKTHELVCRLKRDNVTIADA-GDKWRAVWASYDSPFVIFHRHNEVWVKI 231
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: W7TC17_9STRA (Regulatory factor, effector, bacterial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TC17_9STRA) HSP 1 Score: 145 bits (365), Expect = 4.710e-40 Identity = 88/206 (42.72%), Postives = 118/206 (57.28%), Query Frame = 1
Query: 10 FFPFLVIVSSAVQSGAKECHQFSERIESPCAKDTVKPSGYVTREYSADQLIALTDATIDGSSWDEASEQGFEKNFEYITRN-----EIPMTSPVLFRRLGGK---WHVSFFVPSSFEKMEDIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEVLLQLA 603
F F ++ A A+ CH +S IESPC SGY REY +++ T A + S+ +A +GF NF+YI+ +IPMT+PV FRR W VSFFVPS + E++P PKD S+SI +L A +AV F GFA GD+ +LK AL DGV V+ ++E +WAGYDSPFV NRHNEV +++A
Sbjct: 20 FASFTAVLFFASTVAAEVCHLYSSTIESPCFTLLRNESGYEVREYRGEEM--WTSAYVRSPSFAQAQNKGFMANFDYISGENSEGEKIPMTAPVTFRRAPDDQVGWLVSFFVPSKYPSREEVPAPKDESISIMSLGP-ATYAVRVFDGFATFGDFDKNEYELKKALLADGVTPVE--DAENGVLWAGYDSPFVYVNRHNEVWVRVA 220
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A5A8C6L3_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C6L3_CAFRO) HSP 1 Score: 130 bits (328), Expect = 1.430e-34 Identity = 78/178 (43.82%), Postives = 101/178 (56.74%), Query Frame = 1
Query: 79 ERIESPCAKDTVKPSGYVTREYSADQLIALTDATIDGSSWDEASEQGFEKNFEYITRN-----EIPMTSPVLFRRLGG---KWHVSFFVPSSFEKME-DIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNE 585
++IE+PC+ S Y R Y AD SW +A +GF KNF YIT +IPMT PVL R +W VSFFVPS+F + E +P P D V+I+ + A EF GFA E D+++ ADL+AALA DGVAT+ ++W+ +WA YDSPF LF RHNE
Sbjct: 34 DKIEAPCSVSVKNTSSYSIRLYGADAEPEFWSTAAVNGSWADAQGRGFNKNFLYITGANKEGVKIPMTHPVLARHNDSTPTQWQVSFFVPSAFSRNETSVPTPTDKDVTIQRAPL-FKVAFKEFPGFATEKDFLSCEADLRAALAADGVATLG--GTDWSRVWAQYDSPFTLFGRHNE 208
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A813AKP4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AKP4_9DINO) HSP 1 Score: 132 bits (331), Expect = 2.660e-32 Identity = 83/199 (41.71%), Postives = 107/199 (53.77%), Query Frame = 1
Query: 16 PFLVIVSSAVQSGAKECHQFSERIESPCAKDTVKPSGYVTREYSADQLIALTDATIDGSSWDEASEQGFEKNFEYITRN-----EIPMTSPVLFRRLGG---KWHVSFFVPSSFEKME-DIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNE 585
PF V V + A ++IE+PC+ S Y R Y AD SW +A +GF KNF YIT +IPMT PVL R +W VSFFVPS+F + E +P P D V+I+ + A EF GFA E D+++ ADL+AALA DGVAT+ ++W+ +WA YDSPF LF RHNE
Sbjct: 393 PFTVQVQAQTLPTAPCFIYDDDKIEAPCSVSVKNTSSYSIRLYGADAEPEFWSTAAVNGSWADAQGRGFNKNFLYITGANKEGVKIPMTHPVLARHNDSTPTQWQVSFFVPSAFSRNETSVPTPTDKDVTIQRAPL-FKVAFKEFPGFATEKDFLSCEADLRAALAADGVATLG--GTDWSRVWAQYDSPFTLFGRHNE 588
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A7S3XQ52_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ52_HETAK) HSP 1 Score: 102 bits (255), Expect = 7.980e-24 Identity = 55/101 (54.46%), Postives = 71/101 (70.30%), Query Frame = 1
Query: 301 WHVSFFVPSSFEKMEDIPKPKDPSVSIKALSKGAR-FAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEVLLQL 600
W VSFFVP++F D P P D V I ++ GAR +A + F GFA E D+ A+ A+L+AALA DGVA V P + EW ++AGYDSPFVLFNRHNEV +++
Sbjct: 94 WRVSFFVPAAFPSPADAPAPLDADVEI--VTSGARTYAALLFPGFAAEADWPAREAELRAALAADGVA-VKPGDEEWGVVYAGYDSPFVLFNRHNEVWIEV 191
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A812WTQ5_9DINO (HEBP2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812WTQ5_9DINO) HSP 1 Score: 102 bits (254), Expect = 1.640e-23 Identity = 76/200 (38.00%), Postives = 104/200 (52.00%), Query Frame = 1
Query: 52 GAKECHQFS-ERIESPCAKDTVKPSGYVT------REYSADQLIAL--TDATIDGSSWDEASEQGFEKNFEYITRN-----EIPMTSPVLFRRLGGK-WHVSFFVPSS-FEKMEDIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEVLLQLA 603
G CHQF ++E+PC + VK T R+Y AD T A I S++ +A QGF++NF++I+ +IPMT+PVL R G + W FFVP+S F + IP P V I + K A FGGFA E ++ L A+A+ G V + ++WA YDSPF LFNRHNEV + +A
Sbjct: 22 GDPPCHQFGVNKLETPCF-NLVKRFNSSTGIQVEVRQYGADPAHPQFWTQANIANSTFRDAETQGFQENFDFISGENSAGRKIPMTAPVLMRPNGEEGWFNDFFVPASLFNNKDSIPT--SPVVGITPM-KNLLVATTGFGGFATEAEFQTTTVTLLKAVAEAGYDVVP---DAFEQVWAQYDSPFTLFNRHNEVWVHVA 214
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A7R9TM85_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TM85_9VIRI) HSP 1 Score: 94.0 bits (232), Expect = 2.520e-20 Identity = 69/200 (34.50%), Postives = 95/200 (47.50%), Query Frame = 1
Query: 37 SAVQSGAKECHQFSERIESPCAKDTVKPSGYVTREYSADQLIALTDATIDGSSWDEASEQGFEKNFEYIT----RNE-IPMTSPVLFRR-------LGGKWHVSFFVPSSFEKMEDIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEVLLQL 600
+A GA C + +E P + G+ REY D + DA D S+ EAS QGFE F YI+ +NE I MT PV + KW VSFFVPS F D+P P ++ I+A ++ + FGGF E DY Q ++L A+ G+ S+ +AGY SPF + RH EV + +
Sbjct: 10 AAAPKGAARCGPDTGSLEIPACTVVKEYDGFEVREY--DTGLMWADAHFDSLSYREASFQGFEACFGYISGANDKNETIEMTGPVRMQPGKQAAPGSAEKWTVSFFVPSKFASRADVPVPLANNMEIEAPARTFKAVAGPFGGFPGERDYQRQLSNLVKAVEAAGLKVA----SDADVTYAGYSSPFTVIGRHQEVWIDV 203
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A7S3BG00_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BG00_9VIRI) HSP 1 Score: 94.0 bits (232), Expect = 3.700e-20 Identity = 66/191 (34.55%), Postives = 97/191 (50.79%), Query Frame = 1
Query: 55 AKECHQFSERIESPCAKDTVKPSGYVTREYSADQLIALTDATIDGSSWDEASEQGFEKNFEYITRNE-----IPMTSPVLFRRL---GGKWHVSFFVPSSFEKMEDIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEVLLQLA 603
A +C + +E+P + G R Y A L A T ++GS + +AS QGFE+ F YI+ I MT PV + L W VSFFVPS F +P+P DP+++I+A + + FGGF + DY A L+A++A G+ + ++ +A GY SPF + RH EV L +A
Sbjct: 40 AAKCGPDTGSLETPACEVVSTFDGGEVRSYGAGLLWATT--RVEGS-YSDASYQGFERCFAYISGTNDQNATIEMTGPVRIQPLDETSSTWKVSFFVPSKFTA-GTVPQPTDPTMAIEAPASSYKAVYGPFGGFPGQSDYEADLKKLQASVAAAGIKLANDKDITYA----GYSSPFTILGRHQEVWLDVA 222
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A7M7RGH0_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7RGH0_STRPU) HSP 1 Score: 84.7 bits (208), Expect = 7.490e-17 Identity = 65/189 (34.39%), Postives = 93/189 (49.21%), Query Frame = 1
Query: 58 KECHQFSERIESPCAKDTVKPSGYVTREYSADQLIALTDATIDGSSWDEASEQGFEKNFEYITRN-----EIPMTSPVLFRRLGGK-------WHVSFFVPSSFEKMEDIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEV 588
++ +F + +E P GY R+YS + ++ I S+D AS QGFE+ F YI N +I MT+PV R + G+ + VSFF+P+ E + P P D V + R V FGGFA + D++ A+L AL D + + D AGYDSPF +F+RHNEV
Sbjct: 25 QDAPKFCKGLECPEFTTIQSSEGYEERQYSESKWVSTE---IMSMSYDSASSQGFERLFNYIEGNNEQKQKIAMTAPVATRVIPGQGPACESNFTVSFFIPA--EHSANPPAPSDSDVFFTTIP-AHRAYVKSFGGFASQDDWIQAGAELGRAL--DALHSYDSSYY----YTAGYDSPFTIFSRHNEV 201 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6951.1.1 >prot_P-wetherbeei_contig6951.1.1 ID=prot_P-wetherbeei_contig6951.1.1|Name=mRNA_P-wetherbeei_contig6951.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=201bp MLRFFPFLVIVSSAVQSGAKECHQFSERIESPCAKDTVKPSGYVTREYSAback to top mRNA from alignment at P-wetherbeei_contig6951:1789..2967+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6951.1.1 ID=mRNA_P-wetherbeei_contig6951.1.1|Name=mRNA_P-wetherbeei_contig6951.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1179bp|location=Sequence derived from alignment at P-wetherbeei_contig6951:1789..2967+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6951:1789..2967+ >mRNA_P-wetherbeei_contig6951.1.1 ID=mRNA_P-wetherbeei_contig6951.1.1|Name=mRNA_P-wetherbeei_contig6951.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=603bp|location=Sequence derived from alignment at P-wetherbeei_contig6951:1789..2967+ (Phaeothamnion wetherbeei SAG_119_79)back to top |