mRNA_P-wetherbeei_contig6951.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6951.1.1
Unique NamemRNA_P-wetherbeei_contig6951.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A6S9GV20_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GV20_HETAK)

HSP 1 Score: 156 bits (394), Expect = 3.120e-44
Identity = 90/204 (44.12%), Postives = 116/204 (56.86%), Query Frame = 1
Query:   64 CHQFSERIESPCAKDTVKPSGYVTREYSADQLIALTDATIDGSSWDEASEQGFEKNFEYITRNE-----IPMTSPVLFRRL-------------------GGKWHVSFFVPSSFEKMEDIPKPKDPSVSIKALSKGAR-FAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEVLLQL 600
            CHQ+S+ IE+PC K   +   Y  R Y   +    T+A I   SW +   QGF KNF+YI+        IPMT+PVLFRR                       W VSFFVP++F    D P P D  V I  ++ GAR +A + F GFA E D+ A+ A+L+AALA DGVA V P + EW  ++AGYDSPFVLFNRHNEV +++
Sbjct:   25 CHQYSQEIEAPCVKVISRNENYEIRRYGESREDVWTNAHIASDSWSQVQSQGFYKNFDYISGGNSEEMTIPMTAPVLFRRAPXXXXXXXXXXXXXXXXXXXXXWRVSFFVPAAFPSPADAPAPLDADVEI--VTSGARTYAALLFPGFAAEADWPAREAELRAALAADGVA-VKPGDEEWGVVYAGYDSPFVLFNRHNEVWIEV 225          
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A835ZHJ2_9STRA (SOUL heme-binding protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHJ2_9STRA)

HSP 1 Score: 154 bits (389), Expect = 4.480e-43
Identity = 86/210 (40.95%), Postives = 119/210 (56.67%), Query Frame = 1
Query:   64 CHQFSERIESPCAKDTVKPSGYVTREYSADQLIALTDATIDGSSWDEASEQGFEKNFEYIT----RNE-IPMTSPVLFRRL-------------------GGK-------WHVSFFVPSSFEKMEDIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEVLLQL 600
            CHQ+S+ IESPC +   +P GY  R Y+A+     TDA +D   + +A+ +GF KN+ YI+    +NE IPMTSPV+FR+                    GG        WHV FFVPS +E   D+P P+  +V+I A+  GA FAV  FGGFA E D+  +  +L   L +D V   D    +W  +WA YDSPFV+F+RHNEV +++
Sbjct:   23 CHQYSDTIESPCNEVICRPRGYEIRRYAANNTEFFTDAFVDSDCFLKAATEGFNKNYAYISGKNSKNETIPMTSPVIFRKYNDTSGGGGNGSADETADLTGGSEHCLAHGWHVGFFVPSKYETRGDVPVPEVENVTIAAVPSGAVFAVKTFGGFASERDFNRKTHELVCRLKRDNVTIADA-GDKWRAVWASYDSPFVIFHRHNEVWVKI 231          
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: W7TC17_9STRA (Regulatory factor, effector, bacterial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TC17_9STRA)

HSP 1 Score: 145 bits (365), Expect = 4.710e-40
Identity = 88/206 (42.72%), Postives = 118/206 (57.28%), Query Frame = 1
Query:   10 FFPFLVIVSSAVQSGAKECHQFSERIESPCAKDTVKPSGYVTREYSADQLIALTDATIDGSSWDEASEQGFEKNFEYITRN-----EIPMTSPVLFRRLGGK---WHVSFFVPSSFEKMEDIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEVLLQLA 603
            F  F  ++  A    A+ CH +S  IESPC       SGY  REY  +++   T A +   S+ +A  +GF  NF+YI+       +IPMT+PV FRR       W VSFFVPS +   E++P PKD S+SI +L   A +AV  F GFA  GD+     +LK AL  DGV  V+  ++E   +WAGYDSPFV  NRHNEV +++A
Sbjct:   20 FASFTAVLFFASTVAAEVCHLYSSTIESPCFTLLRNESGYEVREYRGEEM--WTSAYVRSPSFAQAQNKGFMANFDYISGENSEGEKIPMTAPVTFRRAPDDQVGWLVSFFVPSKYPSREEVPAPKDESISIMSLGP-ATYAVRVFDGFATFGDFDKNEYELKKALLADGVTPVE--DAENGVLWAGYDSPFVYVNRHNEVWVRVA 220          
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A5A8C6L3_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C6L3_CAFRO)

HSP 1 Score: 130 bits (328), Expect = 1.430e-34
Identity = 78/178 (43.82%), Postives = 101/178 (56.74%), Query Frame = 1
Query:   79 ERIESPCAKDTVKPSGYVTREYSADQLIALTDATIDGSSWDEASEQGFEKNFEYITRN-----EIPMTSPVLFRRLGG---KWHVSFFVPSSFEKME-DIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNE 585
            ++IE+PC+      S Y  R Y AD             SW +A  +GF KNF YIT       +IPMT PVL R       +W VSFFVPS+F + E  +P P D  V+I+      + A  EF GFA E D+++  ADL+AALA DGVAT+    ++W+ +WA YDSPF LF RHNE
Sbjct:   34 DKIEAPCSVSVKNTSSYSIRLYGADAEPEFWSTAAVNGSWADAQGRGFNKNFLYITGANKEGVKIPMTHPVLARHNDSTPTQWQVSFFVPSAFSRNETSVPTPTDKDVTIQRAPL-FKVAFKEFPGFATEKDFLSCEADLRAALAADGVATLG--GTDWSRVWAQYDSPFTLFGRHNE 208          
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A813AKP4_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AKP4_9DINO)

HSP 1 Score: 132 bits (331), Expect = 2.660e-32
Identity = 83/199 (41.71%), Postives = 107/199 (53.77%), Query Frame = 1
Query:   16 PFLVIVSSAVQSGAKECHQFSERIESPCAKDTVKPSGYVTREYSADQLIALTDATIDGSSWDEASEQGFEKNFEYITRN-----EIPMTSPVLFRRLGG---KWHVSFFVPSSFEKME-DIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNE 585
            PF V V +     A       ++IE+PC+      S Y  R Y AD             SW +A  +GF KNF YIT       +IPMT PVL R       +W VSFFVPS+F + E  +P P D  V+I+      + A  EF GFA E D+++  ADL+AALA DGVAT+    ++W+ +WA YDSPF LF RHNE
Sbjct:  393 PFTVQVQAQTLPTAPCFIYDDDKIEAPCSVSVKNTSSYSIRLYGADAEPEFWSTAAVNGSWADAQGRGFNKNFLYITGANKEGVKIPMTHPVLARHNDSTPTQWQVSFFVPSAFSRNETSVPTPTDKDVTIQRAPL-FKVAFKEFPGFATEKDFLSCEADLRAALAADGVATLG--GTDWSRVWAQYDSPFTLFGRHNE 588          
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A7S3XQ52_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ52_HETAK)

HSP 1 Score: 102 bits (255), Expect = 7.980e-24
Identity = 55/101 (54.46%), Postives = 71/101 (70.30%), Query Frame = 1
Query:  301 WHVSFFVPSSFEKMEDIPKPKDPSVSIKALSKGAR-FAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEVLLQL 600
            W VSFFVP++F    D P P D  V I  ++ GAR +A + F GFA E D+ A+ A+L+AALA DGVA V P + EW  ++AGYDSPFVLFNRHNEV +++
Sbjct:   94 WRVSFFVPAAFPSPADAPAPLDADVEI--VTSGARTYAALLFPGFAAEADWPAREAELRAALAADGVA-VKPGDEEWGVVYAGYDSPFVLFNRHNEVWIEV 191          
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A812WTQ5_9DINO (HEBP2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812WTQ5_9DINO)

HSP 1 Score: 102 bits (254), Expect = 1.640e-23
Identity = 76/200 (38.00%), Postives = 104/200 (52.00%), Query Frame = 1
Query:   52 GAKECHQFS-ERIESPCAKDTVKPSGYVT------REYSADQLIAL--TDATIDGSSWDEASEQGFEKNFEYITRN-----EIPMTSPVLFRRLGGK-WHVSFFVPSS-FEKMEDIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEVLLQLA 603
            G   CHQF   ++E+PC  + VK     T      R+Y AD       T A I  S++ +A  QGF++NF++I+       +IPMT+PVL R  G + W   FFVP+S F   + IP    P V I  + K    A   FGGFA E ++      L  A+A+ G   V      + ++WA YDSPF LFNRHNEV + +A
Sbjct:   22 GDPPCHQFGVNKLETPCF-NLVKRFNSSTGIQVEVRQYGADPAHPQFWTQANIANSTFRDAETQGFQENFDFISGENSAGRKIPMTAPVLMRPNGEEGWFNDFFVPASLFNNKDSIPT--SPVVGITPM-KNLLVATTGFGGFATEAEFQTTTVTLLKAVAEAGYDVVP---DAFEQVWAQYDSPFTLFNRHNEVWVHVA 214          
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A7R9TM85_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TM85_9VIRI)

HSP 1 Score: 94.0 bits (232), Expect = 2.520e-20
Identity = 69/200 (34.50%), Postives = 95/200 (47.50%), Query Frame = 1
Query:   37 SAVQSGAKECHQFSERIESPCAKDTVKPSGYVTREYSADQLIALTDATIDGSSWDEASEQGFEKNFEYIT----RNE-IPMTSPVLFRR-------LGGKWHVSFFVPSSFEKMEDIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEVLLQL 600
            +A   GA  C   +  +E P      +  G+  REY  D  +   DA  D  S+ EAS QGFE  F YI+    +NE I MT PV  +           KW VSFFVPS F    D+P P   ++ I+A ++  +     FGGF  E DY  Q ++L  A+   G+       S+    +AGY SPF +  RH EV + +
Sbjct:   10 AAAPKGAARCGPDTGSLEIPACTVVKEYDGFEVREY--DTGLMWADAHFDSLSYREASFQGFEACFGYISGANDKNETIEMTGPVRMQPGKQAAPGSAEKWTVSFFVPSKFASRADVPVPLANNMEIEAPARTFKAVAGPFGGFPGERDYQRQLSNLVKAVEAAGLKVA----SDADVTYAGYSSPFTVIGRHQEVWIDV 203          
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A7S3BG00_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BG00_9VIRI)

HSP 1 Score: 94.0 bits (232), Expect = 3.700e-20
Identity = 66/191 (34.55%), Postives = 97/191 (50.79%), Query Frame = 1
Query:   55 AKECHQFSERIESPCAKDTVKPSGYVTREYSADQLIALTDATIDGSSWDEASEQGFEKNFEYITRNE-----IPMTSPVLFRRL---GGKWHVSFFVPSSFEKMEDIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEVLLQLA 603
            A +C   +  +E+P  +      G   R Y A  L A T   ++GS + +AS QGFE+ F YI+        I MT PV  + L      W VSFFVPS F     +P+P DP+++I+A +   +     FGGF  + DY A    L+A++A  G+   + ++  +A    GY SPF +  RH EV L +A
Sbjct:   40 AAKCGPDTGSLETPACEVVSTFDGGEVRSYGAGLLWATT--RVEGS-YSDASYQGFERCFAYISGTNDQNATIEMTGPVRIQPLDETSSTWKVSFFVPSKFTA-GTVPQPTDPTMAIEAPASSYKAVYGPFGGFPGQSDYEADLKKLQASVAAAGIKLANDKDITYA----GYSSPFTILGRHQEVWLDVA 222          
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Match: A0A7M7RGH0_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7RGH0_STRPU)

HSP 1 Score: 84.7 bits (208), Expect = 7.490e-17
Identity = 65/189 (34.39%), Postives = 93/189 (49.21%), Query Frame = 1
Query:   58 KECHQFSERIESPCAKDTVKPSGYVTREYSADQLIALTDATIDGSSWDEASEQGFEKNFEYITRN-----EIPMTSPVLFRRLGGK-------WHVSFFVPSSFEKMEDIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDYVAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEV 588
            ++  +F + +E P         GY  R+YS  + ++     I   S+D AS QGFE+ F YI  N     +I MT+PV  R + G+       + VSFF+P+  E   + P P D  V    +    R  V  FGGFA + D++   A+L  AL  D + + D          AGYDSPF +F+RHNEV
Sbjct:   25 QDAPKFCKGLECPEFTTIQSSEGYEERQYSESKWVSTE---IMSMSYDSASSQGFERLFNYIEGNNEQKQKIAMTAPVATRVIPGQGPACESNFTVSFFIPA--EHSANPPAPSDSDVFFTTIP-AHRAYVKSFGGFASQDDWIQAGAELGRAL--DALHSYDSSYY----YTAGYDSPFTIFSRHNEV 201          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6951.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6S9GV20_HETAK3.120e-4444.12Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A835ZHJ2_9STRA4.480e-4340.95SOUL heme-binding protein-domain-containing protei... [more]
W7TC17_9STRA4.710e-4042.72Regulatory factor, effector, bacterial n=2 Tax=Mon... [more]
A0A5A8C6L3_CAFRO1.430e-3443.82Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A813AKP4_9DINO2.660e-3241.71Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A7S3XQ52_HETAK7.980e-2454.46Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A812WTQ5_9DINO1.640e-2338.00HEBP2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A7R9TM85_9VIRI2.520e-2034.50Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A7S3BG00_9VIRI3.700e-2034.55Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A7M7RGH0_STRPU7.490e-1734.39Uncharacterized protein n=1 Tax=Strongylocentrotus... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6951contigP-wetherbeei_contig6951:1789..2967 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog3218.PP1S540_8V6.1
PFAMsSOUL
Model size603
Max annot lvl35493|Streptophyta
KEGG koko:K22422
Hectar predicted targeting categorysignal peptide
Exons3
Evalue6.41e-18
EggNOG OGsCOG4646@1|root,2QV9V@2759|Eukaryota,37QMD@33090|Viridiplantae,3GF7I@35493|Streptophyta
DescriptionProtein downstream neighbor of
Cds size603
COG categoryKL
BRITEko00000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186947.973717-CDS-P-wetherbeei_contig6951:1788..19871683186947.973717-CDS-P-wetherbeei_contig6951:1788..1987Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6951 1789..1987 +
1683186947.983292-CDS-P-wetherbeei_contig6951:2337..25301683186947.983292-CDS-P-wetherbeei_contig6951:2337..2530Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6951 2338..2530 +
1683186947.9917345-CDS-P-wetherbeei_contig6951:2756..29671683186947.9917345-CDS-P-wetherbeei_contig6951:2756..2967Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6951 2757..2967 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6951.1.1prot_P-wetherbeei_contig6951.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6951 1789..2967 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6951.1.1

>prot_P-wetherbeei_contig6951.1.1 ID=prot_P-wetherbeei_contig6951.1.1|Name=mRNA_P-wetherbeei_contig6951.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=201bp
MLRFFPFLVIVSSAVQSGAKECHQFSERIESPCAKDTVKPSGYVTREYSA
DQLIALTDATIDGSSWDEASEQGFEKNFEYITRNEIPMTSPVLFRRLGGK
WHVSFFVPSSFEKMEDIPKPKDPSVSIKALSKGARFAVVEFGGFAREGDY
VAQAADLKAALAKDGVATVDPQNSEWAEIWAGYDSPFVLFNRHNEVLLQL
A
back to top

mRNA from alignment at P-wetherbeei_contig6951:1789..2967+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6951.1.1 ID=mRNA_P-wetherbeei_contig6951.1.1|Name=mRNA_P-wetherbeei_contig6951.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1179bp|location=Sequence derived from alignment at P-wetherbeei_contig6951:1789..2967+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTTCGCTTCTTCCCTTTCCTTGTCATTGTGTCATCGGCCGTGCAGTC TGGTGCTAAGGAGTGCCACCAGTTCTCCGAACGCATCGAGTCTCCGTGCG CGAAGGACACTGTGAAGCCATCGGGGTACGTAACCAGGGAATACTCGGCT GACCAACTCATCGCTTTGACCGACGCCACCATCGATGGCAGTTCGTGGGG TAAGAATGGCGTATGATCCTGGTTTCATTCGAGTTCCCTGCGCTGCTTCT CTTTTACTTTCTCTTCATTAACGGTCAGTCCTCACCGTTTTCAGTTTCCT TAGCGCCGGTGATCAATACCGAGTCGTTCTTAGAGCCAACACTGGTCAAA GATGGGAGTTCAAAACTCCTTTCGTGCTCAGCACTTTTACATCTTTTTGG CTCGCCTGCAAAACATCCCGACGGCTGAGAGCTGTCTCCTTCATGCTCTG CCAGCCAAGACAGAGAAAGTGAACTCGCCCCTCTCTGCCATGCCTACGTG CTCCCTCGCCCCTCCTGCACCCCTCATGCCTCTCCTGTCGTGCCGCCAGA CGAGGCCTCCGAGCAGGGCTTTGAAAAAAACTTCGAATACATCACCCGCA ACGAGATCCCGATGACCTCGCCGGTGCTGTTCCGGCGGCTCGGCGGGAAG TGGCACGTCTCCTTCTTCGTTCCATCGTCCTTCGAGAAGATGGAGGACAT CCCGAAGCCCAAGGATCCCAGTGTCAGCATCAAAGCATTGAGGTAAGGAC GACTGAAGAGCGCTCTGAGAATCTTTCGCTTCTGTTGCATTTCTGTTAGC TTTTATCCATCTCACGGCTGGATGCGGCGAAAATACATGCTGTTCCTCTC GGCGACTGTATCACTGACAAAAACAACTCTACCGTTTCACCGCTGCCGCC GTCTTTGCCGCCGTCTCCTTACCCGTCCGCTGCGACTCCTGCGACACGAC GATGGCGACCAACGGCAGCAAGGGTGCCAGGTTCGCCGTGGTGGAGTTCG GCGGCTTTGCCCGCGAGGGCGACTACGTCGCCCAGGCGGCCGACCTAAAG GCGGCGTTGGCAAAAGACGGCGTGGCGACGGTAGATCCCCAAAACAGCGA ATGGGCCGAAATCTGGGCGGGGTACGACTCGCCCTTCGTCCTGTTCAACC GTCACAACGAGGTGCTGCTGCAGCTGGCC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6951:1789..2967+

>mRNA_P-wetherbeei_contig6951.1.1 ID=mRNA_P-wetherbeei_contig6951.1.1|Name=mRNA_P-wetherbeei_contig6951.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=603bp|location=Sequence derived from alignment at P-wetherbeei_contig6951:1789..2967+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTTCGCTTCTTCCCTTTCCTTGTCATTGTGTCATCGGCCGTGCAGTC
TGGTGCTAAGGAGTGCCACCAGTTCTCCGAACGCATCGAGTCTCCGTGCG
CGAAGGACACTGTGAAGCCATCGGGGTACGTAACCAGGGAATACTCGGCT
GACCAACTCATCGCTTTGACCGACGCCACCATCGATGGCAGTTCGTGGGA
CGAGGCCTCCGAGCAGGGCTTTGAAAAAAACTTCGAATACATCACCCGCA
ACGAGATCCCGATGACCTCGCCGGTGCTGTTCCGGCGGCTCGGCGGGAAG
TGGCACGTCTCCTTCTTCGTTCCATCGTCCTTCGAGAAGATGGAGGACAT
CCCGAAGCCCAAGGATCCCAGTGTCAGCATCAAAGCATTGAGCAAGGGTG
CCAGGTTCGCCGTGGTGGAGTTCGGCGGCTTTGCCCGCGAGGGCGACTAC
GTCGCCCAGGCGGCCGACCTAAAGGCGGCGTTGGCAAAAGACGGCGTGGC
GACGGTAGATCCCCAAAACAGCGAATGGGCCGAAATCTGGGCGGGGTACG
ACTCGCCCTTCGTCCTGTTCAACCGTCACAACGAGGTGCTGCTGCAGCTG
GCC
back to top