mRNA_P-wetherbeei_contig6737.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6737.1.1 vs. uniprot
Match: A0A0L0DID0_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DID0_THETB) HSP 1 Score: 102 bits (255), Expect = 1.900e-22 Identity = 50/106 (47.17%), Postives = 68/106 (64.15%), Query Frame = 1
Query: 190 KHVLPHGDIKPIVEGKLWVVEGSLSYPLPRNMVIYKMPGEGLLLTSVIALNQQTMEKLEALGKPTTFLVPNKYHTMDLAVYKRQYPQARLVCPAVDREAIEKKTGL 507
KH+ H +I + G LW+VEGS +YPLPRNM I + GLLL SV+A+N+ M +LEALG P +VP++ HT D A YK +YPQ +VC D + I K+ +
Sbjct: 65 KHLRHHSEILELAAG-LWMVEGSNAYPLPRNMFIVALRSGGLLLYSVVAMNEDAMRELEALGMPEIMVVPSRQHTFDAARYKARYPQLTVVCSPEDADVISKRVSV 169
BLAST of mRNA_P-wetherbeei_contig6737.1.1 vs. uniprot
Match: UPI00166C3886 (hypothetical protein n=1 Tax=Dyella caseinilytica TaxID=1849581 RepID=UPI00166C3886) HSP 1 Score: 95.1 bits (235), Expect = 4.460e-20 Identity = 60/169 (35.50%), Postives = 89/169 (52.66%), Query Frame = 1
Query: 175 DSAFQKHVLPHGDIKPIVEGKLWVVEGSL-SYPLPRNMVIYKMPGEGLLLTSVIALNQQTMEKLEALGKPTTFLVPNKYHTMDLAVYKRQYPQARLVCPAVDREAIEKKTGLRIDANAAMEFAAGSQTSYRAGTISHAVPGFGGWECYTFDLGDGHGVAAHFGDMLVNV 678
D +++ V PH D+ + + LWVV+G + LPRNMV+Y+ LLL SV+ALN+Q M KLEALG+P+ ++P+ H +A YKR+YP+ +VCP I K + +D ++ F R G + PG E D + VA D++ NV
Sbjct: 10 DRYWEREVFPHTDLCELTQN-LWVVQGEFPAAKLPRNMVVYRYAKRSLLLHSVVALNEQAMSKLEALGEPSVMVIPHWDHWAHVAAYKRRYPKMDVVCPQASIAGISKH--VHVDYSSEEYFP-------RHGVKYYVPPGINPVEGVLEVSVDENKVAVIMNDLITNV 168
BLAST of mRNA_P-wetherbeei_contig6737.1.1 vs. uniprot
Match: A0A2U3LVI1_9BACT (Uncharacterized protein n=1 Tax=Candidatus Sulfopaludibacter sp. SbA4 TaxID=2043165 RepID=A0A2U3LVI1_9BACT) HSP 1 Score: 87.4 bits (215), Expect = 1.190e-16 Identity = 41/85 (48.24%), Postives = 60/85 (70.59%), Query Frame = 1
Query: 238 LWVVEGSLSYPLPRNMVIYKMPGEGLLLTSVIALNQQTMEKLEALGKPTTFLVPNKYHTMDLAVYKRQYPQARLVCPAVDREAIE 492
LW+V G LS+PL RNMV+Y++P L+L S++AL++ M++LEALGKP+ +VP+ Y MD Y ++YPQA + P +R IE
Sbjct: 36 LWIVRGGLSFPLYRNMVVYRLPDGRLVLHSLVALSEAGMKQLEALGKPSIMVVPHGYDGMDAHWYFQRYPQAAFLTPDEERSRIE 120
BLAST of mRNA_P-wetherbeei_contig6737.1.1 vs. uniprot
Match: A0A8J6AZ97_9EUKA (Uncharacterized protein n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6AZ97_9EUKA) HSP 1 Score: 76.6 bits (187), Expect = 6.400e-13 Identity = 37/88 (42.05%), Postives = 58/88 (65.91%), Query Frame = 1
Query: 220 PIVEGKLWVVEGSLSY--PLPRNMVIYKMPGEG---LLLTSVIALNQQTMEKLEALGKPTTFLVPNKYHTMDLAVYKRQYPQARLVCP 468
P + G +W V G +S +PR M IY++PG LL+ S IA N++TM K++ALGKP ++PN++HT+D V+ +++P +VCP
Sbjct: 55 PRISG-IWEVVGPVSNHNKMPRRMTIYRLPGTETPELLIHSCIACNEETMAKIQALGKPKILVIPNRFHTLDAGVWIQRFPDMAIVCP 141
BLAST of mRNA_P-wetherbeei_contig6737.1.1 vs. uniprot
Match: A0A534TQL0_9DELT (Uncharacterized protein n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534TQL0_9DELT) HSP 1 Score: 75.1 bits (183), Expect = 1.600e-12 Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 1
Query: 196 VLPHGDIKPIVEGKLWVVEGSLSYP-LPRNMVIYKMPGEGLLLTSVIALNQQTMEKLEALGKPTTFLVPNKYHTMDLAVYKRQYPQARLVCPAVDREAIEKK 498
VL HG I+ + E LW VEG L +PR M I + LL + + L ++ M K+E G P LVPN H +D+A +KR+YP+ R++ A R +E++
Sbjct: 36 VLRHGPIEKL-EANLWAVEGVLPRGHVPRRMCIARTTDGRLLFLNAMPLREEAMRKIETFGDPACLLVPNSLHRLDIAAFKRRYPELRILTGAGSRHRVEQR 136
BLAST of mRNA_P-wetherbeei_contig6737.1.1 vs. uniprot
Match: A0A4Q3U582_9BURK (Uncharacterized protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A4Q3U582_9BURK) HSP 1 Score: 70.9 bits (172), Expect = 4.120e-11 Identity = 36/103 (34.95%), Postives = 62/103 (60.19%), Query Frame = 1
Query: 196 VLPHGDIKPIVEGKLWVVEGSLSYPL---PRNMVIYKMPGEGLLLTSVIALNQQTMEKLEALGKPTTFLVPNKYHTMDLAVYKRQYPQARLVCPAVDREAIEK 495
V PHG+++ I +G L V G + PL PR M + ++ + S IAL++ +M+++EALG P+ +VPN H +D ++K++YP +++ P E IE+
Sbjct: 10 VQPHGELQEIDDGIL-TVAGEIHMPLGNFPRRMTVIRLSNGRTAIWSAIALDEPSMQRIEALGAPSIMIVPNPGHRLDSRIWKQRYPDIQVMAPPGGLEQIEE 111
BLAST of mRNA_P-wetherbeei_contig6737.1.1 vs. uniprot
Match: A0A0L0HLS5_SPIPD (Stc1 domain-containing protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HLS5_SPIPD) HSP 1 Score: 70.9 bits (172), Expect = 1.540e-10 Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 1
Query: 202 PHGDIKPIVEGKLWVVEGSL---SYPLPRNMVIYKMPGEGLL-LTSVIALNQQTMEKLEALGKPTTFLVPNKYHTMDLAVYKRQYPQARLVCPAVDREAIEK 495
PH ++ LW V G+L + LP M +Y+ PG L + S I LN + +LEALGK T +VPN+ H + + + YPQA++ CP ++E +EK
Sbjct: 54 PHSPLRQHARN-LWTVVGNLPPRNSALPCTMTVYRFPGTKFLWIHSPICLNDEVRAELEALGKVTWIVVPNRMHRTYVEAWHQLYPQAKIACPEKEKEGVEK 154
BLAST of mRNA_P-wetherbeei_contig6737.1.1 vs. uniprot
Match: A0A1Q7MAC3_9DELT (Uncharacterized protein n=4 Tax=Bacteria TaxID=2 RepID=A0A1Q7MAC3_9DELT) HSP 1 Score: 66.6 bits (161), Expect = 1.580e-9 Identity = 38/99 (38.38%), Postives = 57/99 (57.58%), Query Frame = 1
Query: 196 VLPHGDIKPIVEGKLWVVEGSLSY-PLPRNMVIYKMPGEGLLLTSVIALNQQTMEKLEALGKPTTFLVPNKYHTMDLAVYKRQYPQARLVCPAVDREAI 489
VLPH I+ + E LW VE +L PL R M I ++ L+ + IAL++ +M+++EA GKP L N +H +DL YK +YP R++ R+ I
Sbjct: 7 VLPHQPIEKLQEN-LWTVEATLPQGPLRRRMGIARLGDGQLVFLNAIALDEPSMKRIEAWGKPAFALTANGFHRLDLGSYKARYPGLRVLAAPAARKRI 104
BLAST of mRNA_P-wetherbeei_contig6737.1.1 vs. uniprot
Match: A0A507EG92_9FUNG (Uncharacterized protein n=1 Tax=Spizellomyces sp. 'palustris' TaxID=117820 RepID=A0A507EG92_9FUNG) HSP 1 Score: 67.0 bits (162), Expect = 3.150e-9 Identity = 37/109 (33.94%), Postives = 57/109 (52.29%), Query Frame = 1
Query: 181 AFQKHVLPHGDIKPIVEGKLWVVEGSL---SYPLPRNMVIYKMPGEGLL-LTSVIALNQQTMEKLEALGKPTTFLVPNKYHTMDLAVYKRQYPQARLVCPAVDREAIEK 495
++ + PH ++ LW V G L + LP M +Y+ PG L + S I LN + +LEALGK T +VPN+ H + + YP A++ CP ++E +EK
Sbjct: 47 SYSSLINPHSPLRQHARN-LWTVVGRLPPRNSALPCTMTVYRFPGTKFLWIHSPICLNDKVRAELEALGKVTWIVVPNRMHRTYVEAWHHLYPHAKIACPEKEKEDVEK 154
BLAST of mRNA_P-wetherbeei_contig6737.1.1 vs. uniprot
Match: A0A519HE40_9CAUL (Uncharacterized protein n=1 Tax=Brevundimonas sp. TaxID=1871086 RepID=A0A519HE40_9CAUL) HSP 1 Score: 65.5 bits (158), Expect = 3.560e-9 Identity = 36/99 (36.36%), Postives = 54/99 (54.55%), Query Frame = 1
Query: 202 PHGDIKPIVEGKLWVVEGSLSYPL---PRNMVIYKMPGEGLLLTSVIALNQQTMEKLEALGKPTTFLVPNKYHTMDLAVYKRQYPQARLVCPAVDREAI 489
PHG + + EG L V G + PL PR M + ++ G + S +AL + M +EA G PT +VPN H D+ ++K++YP R+V P EA+
Sbjct: 12 PHGHLHEMDEGLLSVA-GEIVMPLGRFPRRMTVIRLSGGRTAIWSAVALEEPQMRLIEAEGTPTFLIVPNPGHRTDVRIWKKRYPDLRVVTPPGAVEAV 109 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6737.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6737.1.1 >prot_P-wetherbeei_contig6737.1.1 ID=prot_P-wetherbeei_contig6737.1.1|Name=mRNA_P-wetherbeei_contig6737.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=178bp MDSAFQKHVLPHGDIKPIVEGKLWVVEGSLSYPLPRNMVIYKMPGEGLLLback to top mRNA from alignment at P-wetherbeei_contig6737:1013..2526+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6737.1.1 ID=mRNA_P-wetherbeei_contig6737.1.1|Name=mRNA_P-wetherbeei_contig6737.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1514bp|location=Sequence derived from alignment at P-wetherbeei_contig6737:1013..2526+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6737:1013..2526+ >mRNA_P-wetherbeei_contig6737.1.1 ID=mRNA_P-wetherbeei_contig6737.1.1|Name=mRNA_P-wetherbeei_contig6737.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig6737:1013..2526+ (Phaeothamnion wetherbeei SAG_119_79)back to top |