mRNA_P-wetherbeei_contig6733.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6733.1.1 vs. uniprot
Match: A0A6H5LKB4_9PHAE (TYR protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LKB4_9PHAE) HSP 1 Score: 113 bits (283), Expect = 3.990e-23 Identity = 60/161 (37.27%), Postives = 77/161 (47.83%), Query Frame = 2
Query: 263 VFWVLHPAAERLFNSRRLVGAMPDTPLPFDETWGYTHATQPGDMGVVCDWTGVGDFP---DMPTCVQQACHGHGEDDVLPFDLTLPAAAALALSGGRVGGGVSEARFFGSGXXXXXXXXKVTVRLTNGELLALLNPTNDALPYMYDNYDWKWCDAQNITVG 736
VFWV+HP A+RL RR++G FDETWGYTH + G+ G VC+W V P DMPTC+ C GH EDD+LPF + + V+LTN E + L+ PTN+ LPYMYD + W C + G
Sbjct: 534 VFWVVHPTADRLLAWRRMLGRQGVEGWDFDETWGYTHTSVVGETGTVCNWDDV--VPGSGDMPTCITGICGGHNEDDLLPFTVKVKGE---------------------------------NVQLTNAEWMDLIYPTNEDLPYMYDEFKWDHCSEDGYSFG 659
BLAST of mRNA_P-wetherbeei_contig6733.1.1 vs. uniprot
Match: D7G0J8_ECTSI (Putative scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J8_ECTSI) HSP 1 Score: 107 bits (268), Expect = 3.470e-21 Identity = 58/153 (37.91%), Postives = 78/153 (50.98%), Query Frame = 2
Query: 263 VFWVLHPAAERLFNSRRLVGAMPDTPLPFDETWGYTHATQPGDMGVVCDWTGVGDFP---DMPTCVQQACHGHGEDDVLPFDLTLPAAAALALSGGRVGGGVSEARFFGSGXXXXXXXXKVTVRLTNGELLALLNPTNDALPYMYDNYDWKWC 712
+FWV+HP A+RL RR++G FDETWGY H++ G+ G VC+W V P DMPTCV+ C GH EDD+LPF + ++ G V ++LTN + L+ PTN+ LPYMYD + W C
Sbjct: 534 LFWVIHPTADRLLAWRRMLGRQGAEGWDFDETWGYAHSSVVGETGTVCNWDDV--VPGSGDMPTCVKGICGGHNEDDLLPFSV-------------KINGEV--------------------MKLTNAGWMDLIYPTNEDLPYMYDEFKWTHC 651
BLAST of mRNA_P-wetherbeei_contig6733.1.1 vs. uniprot
Match: A0A7S2CGQ1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CGQ1_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.270e-19 Identity = 53/161 (32.92%), Postives = 76/161 (47.20%), Query Frame = 2
Query: 266 FWVLHPAAERLFNSRRLVGAMPDTPLPFDETWGYTHATQPGDMGVVCDWTGVGDFPD-MPTCVQQACHGHGEDDVLPFDLTLPAAAALALSGGRVGGGVSEARFFGSGXXXXXXXXKVTVRLTNGELLALLNPTNDALPYMYDNYDWKWCDAQNITVGLNA 745
FWVLH AAERL RR+ + P DETWG+ H D+GVVCDW+ V + D +PTC + C GHG D LPF F G G +N + + P ND + Y+YDN++W+ C++Q +++ ++
Sbjct: 522 FWVLHTAAERLLQYRRMQADV----SPLDETWGFAHMNAASDVGVVCDWSSVENGGDSLPTCTAKLCEGHGATDTLPFS-----------------------DFLGHGETY-----------SNMQFYDFMEPNNDQILYVYDNFEWEHCESQGVSMDVSV 644
BLAST of mRNA_P-wetherbeei_contig6733.1.1 vs. uniprot
Match: A0A7S2F940_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F940_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 3.490e-16 Identity = 51/165 (30.91%), Postives = 69/165 (41.82%), Query Frame = 2
Query: 218 VSFLPHLSYPNE-------K*QVFWVLHPAAERLFNSRRLVGAMPDTPLPFDETWGYTHATQPGDMGVVCDWTGVGDFPDMPTCVQQACHGHGEDDVLPFDLTLPAAAALALSGGRVGGGVSEARFFGSGXXXXXXXXKVTVRLTNGELLALLNPTNDALPYMYD 691
++ L H+ P E + FW LH AER R++ A + + F++TWGY H D VVCDW+GV +F DMP C + C GH EDD+LPF P TN E +++P N LPY Y+
Sbjct: 24 LAMLCHVGLPGEMFTSAAPQDPTFWPLHGNAERYIQYLRILDA--NNTIEFNQTWGYEHQGAASDTDVVCDWSGVKNFTDMPACSKTECPGHKEDDLLPFKKLFPQQKDTLY--------------------------------TNAEFYDVVSPFNTKLPYAYE 154
BLAST of mRNA_P-wetherbeei_contig6733.1.1 vs. uniprot
Match: F0Y494_AURAN (Tyrosinase_Cu-bd domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y494_AURAN) HSP 1 Score: 90.5 bits (223), Expect = 1.850e-15 Identity = 49/157 (31.21%), Postives = 70/157 (44.59%), Query Frame = 2
Query: 263 VFWVLHPAAERLFNSRRLVGAMPDTPLPFDETWGYTH-ATQPGDMGVVCDWTGVGDFPDMPTCVQQACHGHGEDDVLPFDLTLPAAAALALSGGRVGGGVSEARFFGSGXXXXXXXXKVTVRLTNGELLALLNPTNDALPYMYDNYDWKWCDAQNIT 730
+FW +H A+RL + +R++ T F++TWGY H + P D G VCDW + D+P C + C GH +D+LP G+ E TN E ++P ND LPY+Y+N+DW CD N T
Sbjct: 926 IFWPIHTTADRLLSWKRILAHKGKT--LFNQTWGYAHPSATPSDTGKVCDWLAKDEAMDLPECRVETCEGHNAEDLLP--------------------GMPE--------------------YTNAEFYDFMDPYNDDLPYLYENFDWDHCDKLNFT 1040
BLAST of mRNA_P-wetherbeei_contig6733.1.1 vs. uniprot
Match: F0Y635_AURAN (Myb-like domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y635_AURAN) HSP 1 Score: 89.4 bits (220), Expect = 4.210e-15 Identity = 54/157 (34.39%), Postives = 71/157 (45.22%), Query Frame = 2
Query: 263 VFWVLHPAAERLFNSRRLVGAMPDTPLPFDETWGYTHATQ-PGDMGVVCDWTGVGDFPDMPTCVQQACHGHGEDDVLPFDLTLPAAAALALSGGRVGGGVSEARFFGSGXXXXXXXXKVTVRLTNGELLALLNPTNDALPYMYDNY-DWKWCDAQNI 727
+FWVLH +ER +R++ T L DETW Y H+ P D VCDW+GVGD ++PTC C GH EDD+LPF F G G TN + ++P N LPY YD++ +W CDA +
Sbjct: 834 IFWVLHGLSERFVGFKRILAHEGYTHL--DETWKYHHSMDVPSDTHYVCDWSGVGDSMELPTCTPGTCAGHKEDDLLPFG-----------------------DFLGVGDTY-----------TNRQFWDFISPYNTELPYTYDSFTNWPACDAMGL 954
BLAST of mRNA_P-wetherbeei_contig6733.1.1 vs. uniprot
Match: A0A7S2MH92_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MH92_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.400e-14 Identity = 53/160 (33.12%), Postives = 73/160 (45.62%), Query Frame = 2
Query: 263 VFWVLHPAAERLFNSRRLVGAMPDTPLPFDETWGYTHAT--QPGDMGVVCDWTGVGDFPDMPTCVQQACHGHGEDDVLPFDLTLPAAAALALSGGRVGGGVSEARFFGSGXXXXXXXXKVTVRLTNGELLALLNPTNDALPYMYDNYDWKWCDAQNITVG 736
VFW+LHPA+ERL N RR++ A FDE WGY H++ P D+G V +W F D+PT C GH D+LPF G + + + TN + L+P N+ LPY YD+Y W+ C+A +G
Sbjct: 558 VFWLLHPASERLLNWRRMLKAWKFA--DFDEAWGYNHSSVNAPSDVGKVFNWENTSGF-DLPTHEMGTCPGHEAMDLLPFK-----------------GLIKDGEY-----------------ATNKDFYEFLHPWNEMLPYTYDSYRWEHCNASGDDIG 680
BLAST of mRNA_P-wetherbeei_contig6733.1.1 vs. uniprot
Match: D7FW00_ECTSI (Ortho-aminophenol oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW00_ECTSI) HSP 1 Score: 74.7 bits (182), Expect = 1.590e-10 Identity = 53/161 (32.92%), Postives = 70/161 (43.48%), Query Frame = 2
Query: 233 HLSYPNEK*QVFWVLHPAAERLFNSRRLVGAMPDTPLPFDETWGYTHATQPGDMGVVCDWTGV-GDFPDMPTCVQQACHGHGEDDVLPFDLTLPAAAALALSGGRVGGGVSEARFFGSGXXXXXXXXKVTVRLTNGELLALLNPTNDALPYMYDNYDWKWC 712
HL + FW +HP ERLF L G + D P D + YT + D +V + TG+ GD CHGHG DV PFDL A + G G G + +LTN E+LA+L+ + LPY+YDN+ W C
Sbjct: 544 HLHAGSSLDPTFWAMHPTMERLFMFSSLTGQLTDFHWP-DSEFSYTDS----DGNIVVETTGIYGD----------TCHGHGGSDVFPFDLLDGDDDAFQIKTGMPGNG------------------ETGNKLTNREVLAVLDARFNMLPYVYDNFRWDHC 671
BLAST of mRNA_P-wetherbeei_contig6733.1.1 vs. uniprot
Match: A0A7S2CMM8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMM8_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.550e-8 Identity = 33/79 (41.77%), Postives = 46/79 (58.23%), Query Frame = 2
Query: 263 VFWVLHPAAERLFNSRRLVGAMPDTPLPFDETWGYTHATQPGDMGVVCDWTGV-GDFPDMPTCVQQACHGHGEDDVLPF 496
+FW LH A++ N +RL+ T L + + H P D GVVCDW+GV G+F MP C ++ C GH E D++PF
Sbjct: 102 LFWPLHGLADKFINMKRLMKDAKKTVLDESWGFTHLHQV-PSDTGVVCDWSGVTGEFQ-MPNCTKKTCPGHKEFDIIPF 178
BLAST of mRNA_P-wetherbeei_contig6733.1.1 vs. uniprot
Match: A0A7S2SIM0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SIM0_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 4.050e-8 Identity = 34/67 (50.75%), Postives = 39/67 (58.21%), Query Frame = 2
Query: 263 VFWVLHPAAERLFNSRRLVGAMPDTPLPFDETWGYTHATQPGDMGVVCDWTGVGDFPDMPTCVQQAC 463
VFWVLHPAAER+ RRLV + L D TWGY H D+G+VCDW + DMPTC C
Sbjct: 556 VFWVLHPAAERVMQWRRLVSDLSVRDL--DMTWGYDHRGDASDLGMVCDWD---NDQDMPTCSAGTC 617 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6733.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6733.1.1 >prot_P-wetherbeei_contig6733.1.1 ID=prot_P-wetherbeei_contig6733.1.1|Name=mRNA_P-wetherbeei_contig6733.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp MPDTPLPFDETWGYTHATQPGDMGVVCDWTGVGDFPDMPTCVQQACHGHGback to top mRNA from alignment at P-wetherbeei_contig6733:741..2431+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6733.1.1 ID=mRNA_P-wetherbeei_contig6733.1.1|Name=mRNA_P-wetherbeei_contig6733.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1691bp|location=Sequence derived from alignment at P-wetherbeei_contig6733:741..2431+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6733:741..2431+ >mRNA_P-wetherbeei_contig6733.1.1 ID=mRNA_P-wetherbeei_contig6733.1.1|Name=mRNA_P-wetherbeei_contig6733.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig6733:741..2431+ (Phaeothamnion wetherbeei SAG_119_79)back to top |