mRNA_P-wetherbeei_contig6498.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6498.1.1 vs. uniprot
Match: UPI001C3F3D0C (RHS repeat protein n=1 Tax=Thauera butanivorans TaxID=86174 RepID=UPI001C3F3D0C) HSP 1 Score: 55.1 bits (131), Expect = 2.560e-8 Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = 1
Query: 28 LLASAIGLAAPPAAGQATISYTYDALGRVISASYPNGATVTYTYDNADNRTRAQTQG 198
+LA+ +GL+ P AG +SYTYD LGRV +A+Y NG +TYTYD A NR T G
Sbjct: 19 VLATLLGLSMPVLAGS--VSYTYDQLGRVKTATYSNGVVITYTYDAAGNRVSQVTTG 73
BLAST of mRNA_P-wetherbeei_contig6498.1.1 vs. uniprot
Match: A0A350ZYD0_9RHOO (Uncharacterized protein n=1 Tax=Thauera sp. TaxID=1905334 RepID=A0A350ZYD0_9RHOO) HSP 1 Score: 54.3 bits (129), Expect = 3.450e-8 Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 1
Query: 31 LASAIGLAAPPAAGQATISYTYDALGRVISASYPNGATVTYTYDNADNRTRAQTQG 198
+A+ +GLA P AG +SYTYD LGR+ +A+Y NG +TYTYD A NR T G
Sbjct: 3 VAAMLGLAVPALAGS--VSYTYDTLGRLKTATYSNGVVITYTYDAAGNRLSRVTTG 56
BLAST of mRNA_P-wetherbeei_contig6498.1.1 vs. uniprot
Match: UPI000A31F107 (RHS repeat protein n=1 Tax=Methylocaldum sp. RMAD-M TaxID=2806557 RepID=UPI000A31F107) HSP 1 Score: 53.5 bits (127), Expect = 1.220e-7 Identity = 34/66 (51.52%), Postives = 38/66 (57.58%), Query Frame = 1
Query: 4 RARLGCAALLASAIGLAAPPAAGQATISYTYDALGRVISASYPNGATVTYTYDNADNRTRAQTQGA 201
RA A A A LA P AG T YTYD LGRVI+A+Y NG +TY+YD A NRT GA
Sbjct: 17 RANTSIIASAAVAASLAGPAWAGSVT--YTYDTLGRVITATYSNGVVITYSYDAAGNRTSHLVTGA 80
BLAST of mRNA_P-wetherbeei_contig6498.1.1 vs. uniprot
Match: UPI001ADB1F6A (YD repeat-containing protein n=1 Tax=Brevundimonas sp. A19_0 TaxID=2821087 RepID=UPI001ADB1F6A) HSP 1 Score: 53.1 bits (126), Expect = 1.810e-7 Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 1
Query: 82 ISYTYDALGRVISASYPNGATVTYTYDNADNRTRAQT 192
+ YTYDALGR+ SA+YP G TVTYTYD A NRT+ T
Sbjct: 32 VIYTYDALGRLTSAAYPTGVTVTYTYDAAGNRTQVVT 68
BLAST of mRNA_P-wetherbeei_contig6498.1.1 vs. uniprot
Match: A0A7S6LX42_9PROT (RHS repeat protein n=1 Tax=Nitrosomonas sp. H1_AOB3 TaxID=2741553 RepID=A0A7S6LX42_9PROT) HSP 1 Score: 52.8 bits (125), Expect = 2.180e-7 Identity = 29/56 (51.79%), Postives = 38/56 (67.86%), Query Frame = 1
Query: 31 LASAIGLAAPPAAGQATISYTYDALGRVISASYPNGATVTYTYDNADNRTRAQTQG 198
+A+ +GL+A AG +SYTYDALGR+ +A+Y NG +TYTYD A NR T G
Sbjct: 22 VAAILGLSAAVFAGS--VSYTYDALGRIKTATYSNGVIITYTYDAAGNRVSQITTG 75
BLAST of mRNA_P-wetherbeei_contig6498.1.1 vs. uniprot
Match: A0A560EIZ7_9PROT (YD repeat-containing protein n=1 Tax=Nitrospirillum amazonense TaxID=28077 RepID=A0A560EIZ7_9PROT) HSP 1 Score: 53.1 bits (126), Expect = 2.910e-7 Identity = 31/58 (53.45%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 25 ALLASAIGLAAPPAAGQATISYTYDALGRVISASYPNGATVTYTYDNADNRTRAQTQG 198
A LA A+ A PAA +ISYTYDALGRVI ++ +GAT+ Y+YD A NRT G
Sbjct: 18 ATLAGALSCLALPAAAD-SISYTYDALGRVIKSTTSSGATIQYSYDPAGNRTMVSASG 74
BLAST of mRNA_P-wetherbeei_contig6498.1.1 vs. uniprot
Match: A0A560HC23_9PROT (YD repeat-containing protein n=1 Tax=Nitrospirillum amazonense TaxID=28077 RepID=A0A560HC23_9PROT) HSP 1 Score: 51.6 bits (122), Expect = 6.210e-7 Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 1
Query: 43 IGLAAPPAAGQATISYTYDALGRVISASYPNGATVTYTYDNADNR 177
+GL A P ++Y YDALGRVIS +YPN +T++YTYD A NR
Sbjct: 2 VGLGARPVLASG-VTYKYDALGRVISVTYPNNSTISYTYDAAGNR 45
BLAST of mRNA_P-wetherbeei_contig6498.1.1 vs. uniprot
Match: A0A2T9JDT2_9CAUL (Uncharacterized protein n=2 Tax=Caulobacter radicis TaxID=2172650 RepID=A0A2T9JDT2_9CAUL) HSP 1 Score: 54.3 bits (129), Expect = 1.020e-6 Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 10 RLGCAALLASAIGLAAPPAAGQATISYTYDALGRVISASYPNGATVTYTYDNADNRTR 183
RLG AAL+AS + A A ++ Y YD+LGRV+ +Y NGA+VTY YD A NRT+
Sbjct: 7 RLGLAALMASCV--CAEALAQTQSVKYRYDSLGRVVQVTYSNGASVTYAYDAAGNRTQ 62
BLAST of mRNA_P-wetherbeei_contig6498.1.1 vs. uniprot
Match: V4N3Y1_9CAUL (Uncharacterized protein n=1 Tax=Asticcacaulis sp. YBE204 TaxID=1282363 RepID=V4N3Y1_9CAUL) HSP 1 Score: 50.4 bits (119), Expect = 1.310e-6 Identity = 24/45 (53.33%), Postives = 31/45 (68.89%), Query Frame = 1
Query: 43 IGLAAPPAAGQATISYTYDALGRVISASYPNGATVTYTYDNADNR 177
+G+A + T +Y YDALGRVI ++PNG+ VTYTYD A NR
Sbjct: 13 VGMAIASTSLAGTTTYKYDALGRVIEVTFPNGSKVTYTYDAAGNR 57
BLAST of mRNA_P-wetherbeei_contig6498.1.1 vs. uniprot
Match: A0A248K0M3_9PROT (Uncharacterized protein n=2 Tax=Nitrospirillum amazonense TaxID=28077 RepID=A0A248K0M3_9PROT) HSP 1 Score: 51.2 bits (121), Expect = 1.640e-6 Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query: 49 LAAPPAAGQATISYTYDALGRVISASYPNGATVTYTYDNADNRTRAQTQG 198
LA P +AG I+YTYDALGRVI ++ NGAT+ Y+YD A NRT G
Sbjct: 27 LAIPASAGS--ITYTYDALGRVIKSTASNGATIQYSYDAAGNRTTVSATG 74 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6498.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6498.1.1 >prot_P-wetherbeei_contig6498.1.1 ID=prot_P-wetherbeei_contig6498.1.1|Name=mRNA_P-wetherbeei_contig6498.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=77bp MRARLGCAALLASAIGLAAPPAAGQATISYTYDALGRVISASYPNGATVTback to top mRNA from alignment at P-wetherbeei_contig6498:153..383- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6498.1.1 ID=mRNA_P-wetherbeei_contig6498.1.1|Name=mRNA_P-wetherbeei_contig6498.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=231bp|location=Sequence derived from alignment at P-wetherbeei_contig6498:153..383- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6498:153..383- >mRNA_P-wetherbeei_contig6498.1.1 ID=mRNA_P-wetherbeei_contig6498.1.1|Name=mRNA_P-wetherbeei_contig6498.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=231bp|location=Sequence derived from alignment at P-wetherbeei_contig6498:153..383- (Phaeothamnion wetherbeei SAG_119_79)back to top |