mRNA_P-wetherbeei_contig6490.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6490.2.1 vs. uniprot
Match: A0A383VCQ9_TETOB (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383VCQ9_TETOB) HSP 1 Score: 59.7 bits (143), Expect = 9.240e-9 Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 1
Query: 4 EPDPAFVELVHKHGFSRNGARRAAIATGHAGVDVLLAWCAEHVHDAAFDAPLPP 165
EPDPA V + GFS NG++RAA+ATG++ +V + W H+ D F+ PLPP
Sbjct: 756 EPDPAIVTQLVTMGFSENGSKRAAVATGNSNAEVAMEWVFAHMEDPDFNDPLPP 809
BLAST of mRNA_P-wetherbeei_contig6490.2.1 vs. uniprot
Match: A0A7S3F8Z6_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3F8Z6_9EUKA) HSP 1 Score: 53.5 bits (127), Expect = 1.330e-6 Identity = 23/54 (42.59%), Postives = 34/54 (62.96%), Query Frame = 1
Query: 7 PDPAFVELVHKHGFSRNGARRAAIATGHAGVDVLLAWCAEHVHDAAFDAPLPPP 168
P+ V + GFS NG++RAA+ATG+A + + W H+ DA F+ P+PPP
Sbjct: 203 PNEDIVAQLIAMGFSENGSKRAALATGNASAETAMEWVFSHLEDADFNDPIPPP 256
BLAST of mRNA_P-wetherbeei_contig6490.2.1 vs. uniprot
Match: A0A7S1SZS2_9CHLO (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SZS2_9CHLO) HSP 1 Score: 53.5 bits (127), Expect = 1.380e-6 Identity = 22/55 (40.00%), Postives = 35/55 (63.64%), Query Frame = 1
Query: 4 EPDPAFVELVHKHGFSRNGARRAAIATGHAGVDVLLAWCAEHVHDAAFDAPLPPP 168
+P+P V + GFS NG++RAA+ATG++ + + W H+ D F++PLP P
Sbjct: 657 QPNPEIVSQLMSMGFSENGSKRAALATGNSSAEASMEWVFGHMEDPDFNSPLPDP 711
BLAST of mRNA_P-wetherbeei_contig6490.2.1 vs. uniprot
Match: A0A8J6CGZ8_DIALT (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CGZ8_DIALT) HSP 1 Score: 53.5 bits (127), Expect = 1.380e-6 Identity = 23/53 (43.40%), Postives = 31/53 (58.49%), Query Frame = 1
Query: 1 VEPDPAFVELVHKHGFSRNGARRAAIATGHAGVDVLLAWCAEHVHDAAFDAPL 159
EP V + GFS NG+RRAA+ATG+A + + W H+H+ FD PL
Sbjct: 656 AEPSEEIVAALVSMGFSHNGSRRAALATGNASTEASMEWVLSHMHEDGFDDPL 708
BLAST of mRNA_P-wetherbeei_contig6490.2.1 vs. uniprot
Match: A0A061QQZ9_9CHLO (Ubiquitin carboxyl-terminal hydrolase n=4 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QQZ9_9CHLO) HSP 1 Score: 52.8 bits (125), Expect = 2.570e-6 Identity = 24/53 (45.28%), Postives = 32/53 (60.38%), Query Frame = 1
Query: 4 EPDPAFVELVHKHGFSRNGARRAAIATGHAGVDVLLAWCAEHVHDAAFDAPLP 162
E DP V + GFS NG++RAAIATG+A + + W H+ D F+ PLP
Sbjct: 660 EADPQIVAQLISMGFSENGSKRAAIATGNASAEASMEWVFSHMEDPDFNDPLP 712
BLAST of mRNA_P-wetherbeei_contig6490.2.1 vs. uniprot
Match: M4BEC3_HYAAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BEC3_HYAAE) HSP 1 Score: 52.4 bits (124), Expect = 3.520e-6 Identity = 25/54 (46.30%), Postives = 31/54 (57.41%), Query Frame = 1
Query: 10 DPAFVELVHKHGFSRNGARRAAIATGHAGVDVLLAWCAEHVHDAAFDAPLPPPR 171
D A V + GFS NG +RAAIATG+A + + W H+ D FD P PP R
Sbjct: 661 DEALVAQLVAMGFSENGCKRAAIATGNANAEAAMEWILSHMDDPDFDHPPPPAR 714
BLAST of mRNA_P-wetherbeei_contig6490.2.1 vs. uniprot
Match: A0A7R9UE29_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE29_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 1.680e-5 Identity = 23/51 (45.10%), Postives = 31/51 (60.78%), Query Frame = 1
Query: 7 PDPAFVELVHKHGFSRNGARRAAIATGHAGVDVLLAWCAEHVHDAAFDAPL 159
PD A V + GFSRN A+R+AIA G++ + L + +H D FDAPL
Sbjct: 301 PDEALVNQIEDMGFSRNAAKRSAIAVGNSNFEEALRYAIDHASDPDFDAPL 351
BLAST of mRNA_P-wetherbeei_contig6490.2.1 vs. uniprot
Match: A0A5D6XVD3_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVD3_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 1.690e-5 Identity = 23/52 (44.23%), Postives = 31/52 (59.62%), Query Frame = 1
Query: 1 VEPDPAFVELVHKHGFSRNGARRAAIATGHAGVDVLLAWCAEHVHDAAFDAP 156
V PD + V + GFS NG +RAAIATG+A +V + W H+ D F+ P
Sbjct: 669 VTPDESLVAQLVSMGFSENGCKRAAIATGNANAEVAMEWIFSHMEDPDFNDP 720
BLAST of mRNA_P-wetherbeei_contig6490.2.1 vs. uniprot
Match: A0A2D4C6G6_PYTIN (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6G6_PYTIN) HSP 1 Score: 49.7 bits (117), Expect = 3.160e-5 Identity = 23/52 (44.23%), Postives = 30/52 (57.69%), Query Frame = 1
Query: 1 VEPDPAFVELVHKHGFSRNGARRAAIATGHAGVDVLLAWCAEHVHDAAFDAP 156
V PD A V + GFS NG +RAAIATG+A + + W H+ D F+ P
Sbjct: 664 VTPDEALVVQLISMGFSENGCKRAAIATGNASAEAAMEWIFSHMEDPDFNDP 715 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6490.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6490.2.1 >prot_P-wetherbeei_contig6490.2.1 ID=prot_P-wetherbeei_contig6490.2.1|Name=mRNA_P-wetherbeei_contig6490.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=69bp VEPDPAFVELVHKHGFSRNGARRAAIATGHAGVDVLLAWCAEHVHDAAFDback to top mRNA from alignment at P-wetherbeei_contig6490:2069..2275+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6490.2.1 ID=mRNA_P-wetherbeei_contig6490.2.1|Name=mRNA_P-wetherbeei_contig6490.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=207bp|location=Sequence derived from alignment at P-wetherbeei_contig6490:2069..2275+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6490:2069..2275+ >mRNA_P-wetherbeei_contig6490.2.1 ID=mRNA_P-wetherbeei_contig6490.2.1|Name=mRNA_P-wetherbeei_contig6490.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=207bp|location=Sequence derived from alignment at P-wetherbeei_contig6490:2069..2275+ (Phaeothamnion wetherbeei SAG_119_79)back to top |