mRNA_P-wetherbeei_contig647.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig647.1.1 vs. uniprot
Match: A0A835Z9Z5_9STRA (Ribulose-phosphate 3-epimerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Z5_9STRA) HSP 1 Score: 131 bits (330), Expect = 3.320e-36 Identity = 66/90 (73.33%), Postives = 73/90 (81.11%), Query Frame = 1
Query: 7 HNRPPAIGPSVLASDMSMLAAETAACER--SGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTNAVLDAHLMVSEPAKWIDDMAAAGVDR 270
H+ P IGPSVLASDMS LA E+A + DY+HLDVMDGHFVPNLTFGAPVIK LRKHT A LDAHLMVS+PA+W+DDMA AGVDR
Sbjct: 1 HHLPVGIGPSVLASDMSRLAEESAEIAQHFKEHDYLHLDVMDGHFVPNLTFGAPVIKSLRKHTKATLDAHLMVSDPAQWVDDMADAGVDR 90
BLAST of mRNA_P-wetherbeei_contig647.1.1 vs. uniprot
Match: A0A6H5JRM9_9PHAE (Ribulose-phosphate 3-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRM9_9PHAE) HSP 1 Score: 127 bits (318), Expect = 2.940e-34 Identity = 60/73 (82.19%), Postives = 64/73 (87.67%), Query Frame = 1
Query: 52 MSMLAAETAACERSGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTNAVLDAHLMVSEPAKWIDDMAAAGVDR 270
MS L E+ ER GADYIHLDVMDGHFVPNLTFGAPVIKGLRKHT A+LDAHLMVS PA+W+DDMAAAGVDR
Sbjct: 1 MSRLMEESLDVERQGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTKALLDAHLMVSHPAQWVDDMAAAGVDR 73
BLAST of mRNA_P-wetherbeei_contig647.1.1 vs. uniprot
Match: A0A8J6CAX6_DIALT (Ribulose-phosphate 3-epimerase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CAX6_DIALT) HSP 1 Score: 121 bits (304), Expect = 3.130e-32 Identity = 56/86 (65.12%), Postives = 69/86 (80.23%), Query Frame = 1
Query: 4 PHNRPPAIGPSVLASDMSMLAAETAACERSGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTNAVLDAHLMVSEPAKWIDDMAAAG 261
PH P IGPS+LASD++ LA E+ +GADY+HLD+MDGHFVPNLT+GAPV+ LRKHT+A LD HLMVS P++WIDD+A AG
Sbjct: 6 PHKCPAKIGPSLLASDLADLAGESRRVLAAGADYLHLDIMDGHFVPNLTWGAPVVASLRKHTDAFLDCHLMVSRPSQWIDDIAKAG 91
BLAST of mRNA_P-wetherbeei_contig647.1.1 vs. uniprot
Match: A0A0D2WU07_CAPO3 (Ribulose-phosphate 3-epimerase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WU07_CAPO3) HSP 1 Score: 120 bits (302), Expect = 4.430e-32 Identity = 57/82 (69.51%), Postives = 67/82 (81.71%), Query Frame = 1
Query: 25 IGPSVLASDMSMLAAETAACERSGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTNAVLDAHLMVSEPAKWIDDMAAAGVDR 270
IGPSVLASDMS LA+ET +GADY+HLDVMDGHFVPN+T GAPVIK LRKH+ A D H+MVS+P +W+DDMA AG D+
Sbjct: 10 IGPSVLASDMSCLASETQRVVDAGADYVHLDVMDGHFVPNITMGAPVIKCLRKHSKAFFDLHMMVSKPEQWVDDMADAGGDQ 91
BLAST of mRNA_P-wetherbeei_contig647.1.1 vs. uniprot
Match: F2UCI0_SALR5 (Ribulose-phosphate 3-epimerase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UCI0_SALR5) HSP 1 Score: 119 bits (297), Expect = 3.690e-31 Identity = 57/86 (66.28%), Postives = 68/86 (79.07%), Query Frame = 1
Query: 16 PPAIGPSVLASDMSMLAAETA-ACERSGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTNAVLDAHLMVSEPAKWIDDMAAAGVDR 270
P +GPS+LASD+SMLAA++ A E+ ADY+H+D+MDGHFVPNLT G PV+K LRKHT A LD HLMVS P W+ DMAAAG DR
Sbjct: 29 PAQVGPSILASDLSMLAADSKKAMEQWTADYLHVDIMDGHFVPNLTIGPPVVKCLRKHTTAFLDCHLMVSNPEHWVKDMAAAGADR 114
BLAST of mRNA_P-wetherbeei_contig647.1.1 vs. uniprot
Match: A0A067C660_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C660_SAPPC) HSP 1 Score: 117 bits (294), Expect = 4.380e-31 Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 1
Query: 25 IGPSVLASDMSMLAAETAACERSGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTNAVLDAHLMVSEPAKWIDDMAAAGVDR 270
IGPS+LASD++ L E +GADY+HLDVMDGHFVPN+T+GAPVIK LRKHTNA D H+MVSEP KW+DD+ AG D+
Sbjct: 9 IGPSMLASDLACLKDEALKVVAAGADYLHLDVMDGHFVPNITWGAPVIKSLRKHTNAFFDCHMMVSEPEKWVDDIKDAGGDQ 90
BLAST of mRNA_P-wetherbeei_contig647.1.1 vs. uniprot
Match: A0A024U095_9STRA (Ribulose-phosphate 3-epimerase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024U095_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.810e-30 Identity = 54/82 (65.85%), Postives = 64/82 (78.05%), Query Frame = 1
Query: 25 IGPSVLASDMSMLAAETAACERSGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTNAVLDAHLMVSEPAKWIDDMAAAGVDR 270
IGPS+LASD+S L E +GADY+HLDVMDGHFVPN+T+GAPVIK LRKHT A D H+MVSEP KW+DD+ AG D+
Sbjct: 9 IGPSMLASDLSCLKDEALKVVAAGADYLHLDVMDGHFVPNITWGAPVIKSLRKHTTAFFDVHMMVSEPEKWVDDIKDAGGDQ 90
BLAST of mRNA_P-wetherbeei_contig647.1.1 vs. uniprot
Match: A0A4P9Y0E9_9FUNG (Ribulose-phosphate 3-epimerase n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y0E9_9FUNG) HSP 1 Score: 115 bits (289), Expect = 2.240e-30 Identity = 52/82 (63.41%), Postives = 64/82 (78.05%), Query Frame = 1
Query: 25 IGPSVLASDMSMLAAETAACERSGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTNAVLDAHLMVSEPAKWIDDMAAAGVDR 270
I PS+L+SD S LA E +GADY+H+DVMDGHFVPNLT GAP++K LRKHT+A LD HLMVS+PAKW++D A AG +
Sbjct: 6 IAPSMLSSDFSCLAEEAKRMVDAGADYLHMDVMDGHFVPNLTLGAPIVKSLRKHTDAFLDCHLMVSDPAKWVEDFAKAGASQ 87
BLAST of mRNA_P-wetherbeei_contig647.1.1 vs. uniprot
Match: A0A485KVB4_9STRA (Ribulose-phosphate 3-epimerase n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KVB4_9STRA) HSP 1 Score: 115 bits (287), Expect = 7.210e-30 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = 1
Query: 25 IGPSVLASDMSMLAAETAACERSGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTNAVLDAHLMVSEPAKWIDDMAAAGVDR 270
IGPS+LASD+S L E +GADY+HLDVMDGHFVPN+T+GAPVIK LR+HT A D H+MVSEP KW+DD+ AG D+
Sbjct: 9 IGPSMLASDLSCLKDEALKVVAAGADYLHLDVMDGHFVPNITWGAPVIKSLRQHTKAFFDVHMMVSEPEKWVDDIKDAGGDQ 90
BLAST of mRNA_P-wetherbeei_contig647.1.1 vs. uniprot
Match: A0A087SBR0_AUXPR (Ribulose-phosphate 3-epimerase n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SBR0_AUXPR) HSP 1 Score: 115 bits (288), Expect = 7.310e-30 Identity = 55/85 (64.71%), Postives = 67/85 (78.82%), Query Frame = 1
Query: 16 PPAI-GPSVLASDMSMLAAETAACERSGADYIHLDVMDGHFVPNLTFGAPVIKGLRKHTNAVLDAHLMVSEPAKWIDDMAAAGVD 267
PPAI PS+L+SD + LAAE+ GAD++H+DVMDGHFVPNLT G P++K LR HT+A LD HLMVS PA+W+DD AAAGVD
Sbjct: 14 PPAIISPSILSSDFADLAAESKKILSMGADWLHVDVMDGHFVPNLTLGPPIVKALRAHTDAFLDCHLMVSNPAQWVDDFAAAGVD 98 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig647.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig647.1.1 >prot_P-wetherbeei_contig647.1.1 ID=prot_P-wetherbeei_contig647.1.1|Name=mRNA_P-wetherbeei_contig647.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp MPHNRPPAIGPSVLASDMSMLAAETAACERSGADYIHLDVMDGHFVPNLTback to top mRNA from alignment at P-wetherbeei_contig647:194..490- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig647.1.1 ID=mRNA_P-wetherbeei_contig647.1.1|Name=mRNA_P-wetherbeei_contig647.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig647:194..490- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig647:194..490- >mRNA_P-wetherbeei_contig647.1.1 ID=mRNA_P-wetherbeei_contig647.1.1|Name=mRNA_P-wetherbeei_contig647.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig647:194..490- (Phaeothamnion wetherbeei SAG_119_79)back to top |