mRNA_P-wetherbeei_contig6432.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6432.1.1 vs. uniprot
Match: A0A6H5K9U1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9U1_9PHAE) HSP 1 Score: 165 bits (417), Expect = 1.620e-43 Identity = 112/279 (40.14%), Postives = 152/279 (54.48%), Query Frame = 1
Query: 10 APRACARSMQIIDSKGGCAPPSDIASFV-GAAGATMSVVSILGGRGSGKSTLLNRAFGTDFEVGGAFQREASPGACAAVSESLLLLDCDGADEGLAKPLPAGGATAAITEAELAAFSGALCDAVIVNVWSSDVGRAVSSNVRMLKALFGEKVKR---------------HPPPEDARTLMLLAVHDYDPSVEVSALEAAALQDLEAVWSELELPEGRNGAALADFFAVQVQPLAHPRYQPDAYAAAVAGLRSKLAGGARRVRTAGALASAAASAWEGVR 798
AP A A +M+++D+ G A S+I S + G G M+VV +LG +GSGKSTLLN+AFGT F VGG + A G AA + +LLLDCDG +EG + G TA + AFS AL D V++N+W SD+GR+V+SNVR +K LF EK++ T +++AVHD DP + ALE A ++++ AVW E++ P G D A V + HPRY AYA A+ L+ KL TAG AW+ VR
Sbjct: 50 APVAGAPTMELVDASGKLASASEITSLLSGFGGKAMNVVGVLGSKGSGKSTLLNQAFGTSFSVGGPLSQGAPTGVSAATCDGVLLLDCDGLEEGADPTAISKGTTAG----QATAFSAALSDVVLMNLWRSDLGRSVASNVRTIKTLFSEKLQEIAAAGLTGDLEEVDSSAAAAFRPTPLVVAVHDCDPGADTDALEWAVMEEMLAVWREVDHPSGTTLQECFDIQANIVLAIPHPRYHAVAYATAIEALKQKLQTMEASTATAG-FRDRVTRAWQAVR 323
BLAST of mRNA_P-wetherbeei_contig6432.1.1 vs. uniprot
Match: A0A835ZBA4_9STRA (RHD3a, RHD3/Sey1 family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBA4_9STRA) HSP 1 Score: 124 bits (312), Expect = 5.790e-29 Identity = 89/262 (33.97%), Postives = 140/262 (53.44%), Query Frame = 1
Query: 25 ARSMQIIDSKGGCAPPSDIASFVGAAGATMSVVSILGGRGSGKSTLLNRAFGTDFEVGGAFQR-EASPGACAAVSESLLLLDCDGADEGLAKPLPAGGATAAITEAELAAFSGALCDAVIVNVWSSDVGRAVSSNVRMLKALFGEKVKRHPPPED--ARTL-MLLAVHDYDPSVEVSALEAAALQDLEAVWSELELPEGRNGAALADFFAVQVQPLAHPRYQPDAYAAAVAGLRSKLAGGARRVRTAGALASAAASAWEGVR 798
A+ + ++DS G AP ++ S G +VV+ +GG+GS K++LLN AFGT FE F ++S A ++ +++++CDG EA+LAA S A+ D V+VNV+ SD+GR V++NVR K++F +++ ++ A L +++ VHD +P V+ A++ A + +A W EL G L+ A+ V + HPRY PDAYAAA A +R+ A A T + A +AW R
Sbjct: 22 AKPVTLVDSAGKLAPNRELISLAARTGERSTVVASVGGKGSRKNSLLNNAFGTAFEAVDTFATGDSSSSATVDGAQGVIVVNCDGVTTD--------------GEAKLAALSAAVADVVVVNVYRSDLGRNVAANVRAFKSVFAQRLAAEQEAKEGTAEPLPLIVVVHDCEPDVDADAIKEAVEAEAQAAWDEL----GGPATPLSVHVALSVAAVPHPRYAPDAYAAAAAAVRATCAADAGS--TTASFAPRLGTAWTATR 263
BLAST of mRNA_P-wetherbeei_contig6432.1.1 vs. uniprot
Match: W7TE62_9STRA (GTP-binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TE62_9STRA) HSP 1 Score: 120 bits (301), Expect = 2.430e-27 Identity = 84/238 (35.29%), Postives = 123/238 (51.68%), Query Frame = 1
Query: 34 MQIIDSKGGCAPPSDIASFV-----GAAGATMSVVSILGGRGSGKSTLLNRAFGTDFEVGGAFQREASP----GACAAVSESLLLLDCDGADEGLAKPLPAGGATAAITEAELAAFSGALCDAVIVNVWSSDVGRAVSSNVRMLKALFGEKVKRHPPPEDARTLMLLAVHDYDPSVEVSALEAAALQDLEAVWSELELPEGRNGAALADFFAVQVQPLAHPRYQPDAYAAAVAGLRSK 720
+++ID+ G ++ FV A + +V G +GSGKSTLLN+ F TDF +G A A P CAA L+ +D D G + A T + A + L DA+++N+WSSDVGR V N L+A+F E++ P +TL+L+ VHD+ + A L+ LE VW+ L E + A L DFF V++ L HPRY+P+ Y A+ GLR++
Sbjct: 62 LEVIDAAGKLKAKEEVNRFVQKRLKATERAGLVIVGSAGSKGSGKSTLLNKLFDTDFGIGRALGPHARPQGGVALCAAGGGGLVCVDYDAVGTGTEE---------AGTNGKFLALTTKLADAILLNLWSSDVGRNVPYNSLALQAIFQEQLHAEGSP---KTLLLVVVHDHPEEEAGDRTKEAVLEVLETVWASLPRTEEKADAELTDFFDVEMAFLPHPRYRPEEYERALEGLRNR 287
BLAST of mRNA_P-wetherbeei_contig6432.1.1 vs. uniprot
Match: A0A5J4YZC2_PORPP (Protein SEY1-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZC2_PORPP) HSP 1 Score: 93.6 bits (231), Expect = 5.430e-18 Identity = 62/228 (27.19%), Postives = 113/228 (49.56%), Query Frame = 1
Query: 82 ASFVGAAGATMSVVSILGGRGSGKSTLLNRAFGTDFEVGGAFQREASPGACAAV--------------SESLLLLDCDGADEGLAKPLPAGGATAAITEAELAAFSGALCDAVIVNVWSSDVGRAVSSNVRMLKALFGEKVKRHPPPEDARTLMLLAVHDYDPSVEVSALEAAALQDLEAVWSELELPEGRNGAALADFFAVQVQPLAHPRYQPDAYAAAVAGLRSKL 723
ASF + V++LG +GKS+LLN FG F V A + S GA A ++++++LD G D T+ +A++ LCD ++ N+WS+D+GR + + +LK++F E + + P E RT ++ V D D +V S ++ + + + VW+ + + + ++ F ++V L H +++ + + AVAGLR++L
Sbjct: 34 ASFADTGAEVVKCVAVLGASATGKSSLLNELFGCKFPV--ARRLATSSGAAPADMVRFALPLEDKCPHNQAMVVLDAPGRDA---------------TDVRVASYFAGLCDVILFNLWSTDLGRRDAGRLELLKSVFCESSQMNSPSEAQRTCIVFVVRDNDDNVAESTIKDKLVAEAKRVWASANVSDEFSTLDMSSLFDIEVVALPHAKFRKEEFVGAVAGLRARL 244
BLAST of mRNA_P-wetherbeei_contig6432.1.1 vs. uniprot
Match: A0A2U1LW82_ARTAN (Protein ROOT HAIR DEFECTIVE 3 n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LW82_ARTAN) HSP 1 Score: 69.7 bits (169), Expect = 8.040e-10 Identity = 46/161 (28.57%), Postives = 81/161 (50.31%), Query Frame = 1
Query: 334 EAELAAFSGALCDAVIVNVWSSDVGRAVSSNVRMLKALFGEKVKRHPPPEDARTLMLLAVHDYDPSVEVSALEAAALQDLEAVWSELELPEGRNGAALADFFAVQVQPLAHPRYQPDAYAAAVAGLRSK---------LAGGARRVRTAGALASAAASAWE 789
E ++A F+ A+ D V++N+W S +G ++N +L+ +F ++ P +T ++ + D + LE+ +D + +W ++ PE L+DFF +QV+ LAH +YQ + + VA LR K LAG R V A + +A W+
Sbjct: 74 EKQIALFALAVSDIVLINMWCSAIGCEQAANKPLLRTIFQVMLQLFTP---RKTTLMFVIRDKT-DTPLEKLESLLREDTQKIWDDIPKPEAHKQTPLSDFFNIQVEALAHYKYQKEEFKDEVAILRKKFSKSIEAGGLAGDRRGVVPASGFSLSAQEIWK 230
BLAST of mRNA_P-wetherbeei_contig6432.1.1 vs. uniprot
Match: A0A2R6PVW6_ACTCC (Protein ROOT HAIR DEFECTIVE like (Fragment) n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6PVW6_ACTCC) HSP 1 Score: 62.0 bits (149), Expect = 5.100e-8 Identity = 43/164 (26.22%), Postives = 82/164 (50.00%), Query Frame = 1
Query: 232 CAAVSESLLLLDCDGADEGLAKPLPAGGATAAITEAELAAFSGALCDAVIVNVWSSDVGRAVSSNVRMLKALFGEKVKRHPPPEDARTLMLLAVHDYDPSVEVSALEAAALQDLEAVWSELELPEGRNGAALADFFAVQVQPLAHPRYQPDAYAAAVAGLRSKL 723
CA + +L++D +G D G + G + E ++A FS A+ D V++N+W D+GR ++N +L+ LF E + + P +T ++ + D + L +D +W+ + P+ L++ F V+V L + YQ + + VA L+++L
Sbjct: 2 CAGIQPPILVMDLEGND-GTER-----GEENIVFEKQIALFSIAVSDVVLINMWCHDIGREQAANRPLLRILFQEMRRLYKP---RKTTLVYVIRDKS-KTPLDKLAEKLRKDTVQIWNSVPKPQALQDTPLSESFNVEVVALPNYEYQKEDFEEEVAKLKNQL 155
BLAST of mRNA_P-wetherbeei_contig6432.1.1 vs. uniprot
Match: A0A7S3KWA3_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KWA3_EUPCR) HSP 1 Score: 63.2 bits (152), Expect = 9.420e-8 Identity = 56/209 (26.79%), Postives = 98/209 (46.89%), Query Frame = 1
Query: 121 VSILGGRGSGKSTLLNRAFGTDFEV-----GGAFQREASPGACAAVSESLLLLDCDGADEGLAKPLPAGGATAAITEAELAAFSGALCDAVIVNVWSSDVGRAVSSNVRMLKALFGEKVKRHPPPEDARTLMLLA--VHDYDPSVE--VSALEAAALQDLEAVWSELELPEGRNGAALADFFAVQVQPLAHPRYQPDAYAAAVAGLRSK 720
++I+G + SGKSTLLN F T+FE G Q A +++L+ D +G D G E + F+ AL D +++N+W++DVGR +SN +LK +F +K ++ + L+ + ++Y+ + E + LE ++ +W E+ E ++ DFF + + H YQ + A L+ K
Sbjct: 37 IAIIGCQSSGKSTLLNVLFDTNFEQLDQNSRGMAQTTKGVWAARNSEKNILIFDIEGTDS------RERGDDRMTFEQTTSLFALALADVLMINLWTTDVGRYAASNYGLLKVIFEVNLKLFAQNQNQKKLLFVLRDFNEYEHNREKMIELLEG----NVRKIWGEIYKTEEFKDSSPHDFFDFEFHMMPHKIYQKKEFEEAGLQLKEK 235
BLAST of mRNA_P-wetherbeei_contig6432.1.1 vs. uniprot
Match: A0A1R2CA56_9CILI (Protein SEY1 homolog n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CA56_9CILI) HSP 1 Score: 61.6 bits (148), Expect = 3.910e-7 Identity = 53/205 (25.85%), Postives = 101/205 (49.27%), Query Frame = 1
Query: 121 VSILGGRGSGKSTLLNRAFGTDFEVGGAFQ--REASPGACAAVSESL--LLLDCDGADEGLAKPLPAGGATAAITEAELAAFSGALCDAVIVNVWSSDVGRAVSSNVRMLKALFGEKVKRHPPPEDARTLMLLAVHDYDPSVE-VSALEAAALQDLEAVWSELELPEGRNGAALADFFAVQVQPLAHPRYQPDAYAAAVAGLRSK 720
V+I+G + +GKSTLLN F T+F+ + + + + G A + S L++D +G D + G A E A F+ A+ D ++VN+W+S++GR +++V +LK +F +K R L +L D++ V + L+ + +E +W +++ P + D F ++ ++P+ + V L+ K
Sbjct: 36 VAIIGCQSTGKSTLLNMLFETNFDTLDSMKGRNQTTKGIHLAYNLSCKCLVIDIEGTDSQIR------GDDGAAFEQMSALFALAISDVLMVNMWTSEIGRYKAASVGLLKTIFEVNLKLFGQEGKKRILFIL--RDFNDGVNNLGILKQQISKTMEEIWEKIKKPSHLTLCNVFDCFEFDFHTISSKDFKPEEFKREVGVLKDK 232 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6432.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6432.1.1 >prot_P-wetherbeei_contig6432.1.1 ID=prot_P-wetherbeei_contig6432.1.1|Name=mRNA_P-wetherbeei_contig6432.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=266bp ACGAPRACARSMQIIDSKGGCAPPSDIASFVGAAGATMSVVSILGGRGSGback to top mRNA from alignment at P-wetherbeei_contig6432:22..1138- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6432.1.1 ID=mRNA_P-wetherbeei_contig6432.1.1|Name=mRNA_P-wetherbeei_contig6432.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1117bp|location=Sequence derived from alignment at P-wetherbeei_contig6432:22..1138- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6432:22..1138- >mRNA_P-wetherbeei_contig6432.1.1 ID=mRNA_P-wetherbeei_contig6432.1.1|Name=mRNA_P-wetherbeei_contig6432.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig6432:22..1138- (Phaeothamnion wetherbeei SAG_119_79)back to top |