mRNA_P-wetherbeei_contig643.8.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig643.8.1 vs. uniprot
Match: A0A7S1CA25_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CA25_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 3.780e-11 Identity = 32/75 (42.67%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 112 GKIRVEISAAHGRISLSRIAGLTFFAGDGVADAFVTAEGHVADVNRALDGAVYRPDIHWNTRGRPPETVTIRASN 336
G + +S HG ++L+R+AGLTF GDG D + G +AD+NRA+D VYRPD WN +TV + S+
Sbjct: 837 GGATLRLSVEHGTLTLTRVAGLTFAEGDGERDRAIECSGALADINRAIDDMVYRPDAEWNNALNSRDTVAMSISD 911
BLAST of mRNA_P-wetherbeei_contig643.8.1 vs. uniprot
Match: A0A835YPH6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPH6_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.190e-9 Identity = 37/83 (44.58%), Postives = 49/83 (59.04%), Query Frame = 1
Query: 94 AASHWQGKIRVEISAAHGRISLSR-IAGLTFFAGDGVADA-FVTAEGHVADVNRALDGAVYRPDIHWNTRGRPPETVTIRASN 336
A W G+I V + +GR++L+ + GL F +G A + GHVADVN AL G VYRPD ++NT GRP V + ASN
Sbjct: 6308 APPRWPGRIAVTLQTWNGRLALAAPVGGLAFSSGALRTPAPLLEFSGHVADVNAALAGLVYRPDANFNTEGRPYARVAVTASN 6390
BLAST of mRNA_P-wetherbeei_contig643.8.1 vs. uniprot
Match: UPI001AF6EB3E (Tandem-95 repeat protein n=2 Tax=Methylobacterium aquaticum TaxID=270351 RepID=UPI001AF6EB3E) HSP 1 Score: 58.9 bits (141), Expect = 9.240e-8 Identity = 37/94 (39.36%), Postives = 48/94 (51.06%), Query Frame = 1
Query: 22 GTAAHTFADFGATDGNPALDPALHAASHWQGKIRVEISAAHGRISLSRIAGLTFFAGDGVADAFVTAEGHVADVNRALDGAVYRPDIHWNTRGR 303
G T F A GN A+ G + V +SA G +SLSR+ GLTF AGDG DA +T G +AD++ ALDG + P +N R
Sbjct: 801 GATEDTDLVFSAATGN-----AVRVDDRDGGPLTVTLSADQGLLSLSRLTGLTFAAGDGANDAAMTFTGSIADIDAALDGLRFAPRADYNGSAR 889
BLAST of mRNA_P-wetherbeei_contig643.8.1 vs. uniprot
Match: A0A519FW17_9BURK (Uncharacterized protein (Fragment) n=1 Tax=Rubrivivax sp. TaxID=50259 RepID=A0A519FW17_9BURK) HSP 1 Score: 56.6 bits (135), Expect = 5.830e-7 Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 118 IRVEISAAHGRISLSRIAGLTFFAGDGVADAFVTAEGHVADVNRALDGAVYRPDIHWNTRGRPPETVTIRASN 336
+RV +S AHG +SLS +AGL+F GDG DA + G VA++N AL Y P +N P+T+T+ S+
Sbjct: 1057 LRVTLSVAHGTLSLSGLAGLSFITGDGTLDASMVFTGTVANINAALASMTYVPASDYNG----PDTLTLVTSD 1125
BLAST of mRNA_P-wetherbeei_contig643.8.1 vs. uniprot
Match: A0A231N3R6_9GAMM (DUF4347 domain-containing protein n=3 Tax=Zobellella denitrificans TaxID=347534 RepID=A0A231N3R6_9GAMM) HSP 1 Score: 55.5 bits (132), Expect = 1.490e-6 Identity = 31/81 (38.27%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 49 FGATDGNPALDPALHAASHWQGKIRVEISAAHGRISLSRIAGLTFFAGDGVADAFVTAEGHVADVNRALDGAVYRPDIHWN 291
F + +GNP + A S G +RV ++A++G ++L GL+F G G ADA +T EG +AD+N AL+G + P +N
Sbjct: 1305 FSSGNGNPISVSDVDAGS---GSVRVTLTASNGLLTLGGTTGLSFINGSGTADATMTFEGTLADINLALNGLAFSPTGGYN 1382
BLAST of mRNA_P-wetherbeei_contig643.8.1 vs. uniprot
Match: UPI0019220806 (DUF4347 domain-containing protein n=1 Tax=Zobellella sp. CGMCC 1.18722 TaxID=2803811 RepID=UPI0019220806) HSP 1 Score: 54.3 bits (129), Expect = 3.830e-6 Identity = 30/81 (37.04%), Postives = 47/81 (58.02%), Query Frame = 1
Query: 49 FGATDGNPALDPALHAASHWQGKIRVEISAAHGRISLSRIAGLTFFAGDGVADAFVTAEGHVADVNRALDGAVYRPDIHWN 291
F + +GNP + A G +RV ++A++G ++L GL+F G G ADA +T EG +AD+N AL+G + P +N
Sbjct: 1553 FSSGNGNPISVSDVDAGG---GSVRVTLTASNGLLTLGGTTGLSFINGSGTADATMTFEGSLADINLALNGLAFSPTGGYN 1630
BLAST of mRNA_P-wetherbeei_contig643.8.1 vs. uniprot
Match: UPI001AD166E2 (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI001AD166E2) HSP 1 Score: 53.9 bits (128), Expect = 5.000e-6 Identity = 25/55 (45.45%), Postives = 40/55 (72.73%), Query Frame = 1
Query: 118 IRVEISAAHGRISLSRIAGLTFFAGDGVADAFVTAEGHVADVNRALDGAVYRPDI 282
+ V ++A +G ++L+ +AGLTF AGDG ADA +T G++ D+N AL+GA + P +
Sbjct: 806 LEVTLTATNGTLTLAALAGLTFNAGDGTADAAMTFTGNLTDINAALNGASFTPAL 860
BLAST of mRNA_P-wetherbeei_contig643.8.1 vs. uniprot
Match: UPI000A55C0C6 (putative Ig domain-containing protein n=1 Tax=Cellvibrio sp. OA-2007 TaxID=529823 RepID=UPI000A55C0C6) HSP 1 Score: 53.1 bits (126), Expect = 9.600e-6 Identity = 37/104 (35.58%), Postives = 54/104 (51.92%), Query Frame = 1
Query: 25 TAAHTFADFGATDGNPALDPALHAASHWQGKIRVEISAAHGRISLSRIAGLTFFAGDGVADAFVTAEGHVADVNRALDGAVYRPDIHWNTRGRPPETVTIRASN 336
T+ T F A +GN + A ++V IS AHG +SLS +AGLTF G G+AD + G VA++N AL Y PD ++ ET++I ++
Sbjct: 1549 TSEDTDLIFSAGNGNQIQITDVDAGGS---SVQVSISVAHGILSLSSVAGLTFSTGIGLADRSMVFTGTVANINNALSTLYYTPDNGYSGA----ETLSITTND 1645
BLAST of mRNA_P-wetherbeei_contig643.8.1 vs. uniprot
Match: UPI000D389EBB (hypothetical protein n=1 Tax=Devosia naphthalenivorans TaxID=2082392 RepID=UPI000D389EBB) HSP 1 Score: 52.4 bits (124), Expect = 1.770e-5 Identity = 24/60 (40.00%), Postives = 40/60 (66.67%), Query Frame = 1
Query: 112 GKIRVEISAAHGRISLSRIAGLTFFAGDGVADAFVTAEGHVADVNRALDGAVYRPDIHWN 291
G +RV ++A++G ++LS AGL+F G G D +T EG + D+N ALDG + P++ ++
Sbjct: 951 GTLRVSLTASNGALTLSSTAGLSFVLGSGSGDLTMTFEGTLTDINAALDGMSFNPNLGYH 1010
BLAST of mRNA_P-wetherbeei_contig643.8.1 vs. uniprot
Match: A0A1I0CXD1_9DELT (Outer membrane protein OmpA n=4 Tax=Stigmatella TaxID=40 RepID=A0A1I0CXD1_9DELT) HSP 1 Score: 52.4 bits (124), Expect = 1.820e-5 Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 1
Query: 118 IRVEISAAHGRISLSRIAGLTFFAGDGVADAFVTAEGHVADVNRALDGAVYRPDIHW 288
+RV ++A G +LS +GLTF GDG ADA ++ EG + D+N AL+G Y+P ++
Sbjct: 245 LRVTLAANQGAATLSGTSGLTFLGGDGTADAAMSFEGKLVDINAALNGLKYKPRANF 301 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig643.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig643.8.1 >prot_P-wetherbeei_contig643.8.1 ID=prot_P-wetherbeei_contig643.8.1|Name=mRNA_P-wetherbeei_contig643.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=112bp LGRRQLPGTAAHTFADFGATDGNPALDPALHAASHWQGKIRVEISAAHGRback to top mRNA from alignment at P-wetherbeei_contig643:7150..7487- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig643.8.1 ID=mRNA_P-wetherbeei_contig643.8.1|Name=mRNA_P-wetherbeei_contig643.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=338bp|location=Sequence derived from alignment at P-wetherbeei_contig643:7150..7487- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig643:7150..7487- >mRNA_P-wetherbeei_contig643.8.1 ID=mRNA_P-wetherbeei_contig643.8.1|Name=mRNA_P-wetherbeei_contig643.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=336bp|location=Sequence derived from alignment at P-wetherbeei_contig643:7150..7487- (Phaeothamnion wetherbeei SAG_119_79)back to top |