mRNA_P-wetherbeei_contig6365.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6365.1.1 vs. uniprot
Match: A0A6H5KWI4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWI4_9PHAE) HSP 1 Score: 145 bits (366), Expect = 9.990e-37 Identity = 98/204 (48.04%), Postives = 137/204 (67.16%), Query Frame = 1
Query: 7 ALNALLDFMDGAGALFGQLCPDVAVEPPIRYNGGAGRGALEELFKTYAEAAFAAEG--GTMPRLDRLQDLFGIKDSKANALSQKVMMNAVMRMMKDGGGEDG-MKGLMNMLGGMPGMDGGXXXXXXXXXXXGGMDAAALKQQVSELKQMLENDEVGPMEVAELRQVYKQQGIDIDDLVRQTDPILD-TLDEDARELFTIFKKLL 606
A NALL +MD AGALF LCP +A++P I+YNG RG LE++F+ A++ + G G M LDRLQDLF IK SKA++++QK+MM+ +M+MM +GGGEDG +GL M+ M GM+G XXXXXXX G K++V LKQM+E+ + EV LR++Y G+DID LV DP ++ ++D DA+E+ + +KLL
Sbjct: 560 ASNALLKYMDEAGALFVTLCPGIALDPQIKYNGTYKRGKLEKVFEAAAKSTLKSMGDEGQMMSLDRLQDLFSIKKSKADSITQKIMMDLMMKMMSEGGGEDGDAEGLEKMMAAMGGMEG----XXXXXXXGAGRSPEDHKREVEALKQMVESGDCPKEEVDALRKMYTDAGLDIDTLVN--DPNMEASMDADAKEVVVLLRKLL 757
BLAST of mRNA_P-wetherbeei_contig6365.1.1 vs. uniprot
Match: A0A835Z1E0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E0_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.590e-27 Identity = 75/209 (35.89%), Postives = 116/209 (55.50%), Query Frame = 1
Query: 7 ALNALLDFMDGAGALFGQLCPDVAVEPPIRYNGGAGRGALEELFKTYAEAAFAAEGGTMP-RLDRLQDLFGIKDSKANALSQKVMMNAVMRMMKDGGGEDGMKGLMNML------GGMPGMDGGXXXXXXXXXXXGGMDAAALKQQVSELKQMLENDEVGPMEVAELRQVYKQQGIDIDDLVRQTDPILDTLDEDARELFTIFKKLLQK 612
AL+ LL +MD AG F +CP VA++PP+RYNG A + LEEL++ + A + M R +RL+D+ IK+SKA +L QKV+M V +MMK+GG GGMP G + AA Q+ K M+++ V EV ELR++YK G+DID +V ++ T+D +A+EL+++ +++L++
Sbjct: 363 ALSDLLLYMDNAGGTFAAVCPGVALDPPLRYNGAAKKRQLEELYENFTRAMVTDQSADMSARQERLRDMLNIKESKARSLEQKVLMEVVQKMMKEGGDXXXXXXXXXXXXXXXEGGGMP----------------EGPEVAA---QLEAFKAMVKDGNVSRDEVTELRKMYKDMGMDIDQMVAESAAAESTMDREAKELYSLLRQMLEQ 552
BLAST of mRNA_P-wetherbeei_contig6365.1.1 vs. uniprot
Match: H6WBA5_VAULI (Uncharacterized protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA5_VAULI) HSP 1 Score: 110 bits (275), Expect = 4.910e-25 Identity = 68/204 (33.33%), Postives = 117/204 (57.35%), Query Frame = 1
Query: 7 ALNALLDFMDGAGALFGQLCPDVAVEPPIRYNGGAGRGALEELFKTYAEAAFAAEGGT--MPRLDRLQDLFGIKDSKANALSQKVMMNAVMRMMKDGGGEDGMKGLMNMLGGMPGMDGGXXXXXXXXXXXGGMDAAALKQQVSELKQMLENDEVGPMEVAELRQVYKQQGIDIDDLVRQTDPILDTLDEDARELFTIFKKLLQK 612
AL L+ FM +G++F +CP + ++PP+RYNGG+ + LEE++ + + A+ ++E M ++DL GIK+ KA A+ QK MM+A+ M+KDGGG+ + M L G +GG ++ Q+ K +++ +V EV ELR++YK+ G+DID LV++++ +D RELF + +++L +
Sbjct: 217 ALMGLVRFMKVSGSVFEAVCPGIVLDPPLRYNGGSKKKQLEEIYASLS-ASISSENSEELMSFQKEIRDLLGIKEFKAKAIEQKAMMDALQNMVKDGGGDGSSQEQMAALLQNIGANGGPEPEMP--------SGPEMEAQLESFKNLVKGGQVTEEEVKELRKMYKEMGMDIDKLVKESEGNEGMMDAQGRELFDLLRQMLSQ 411
BLAST of mRNA_P-wetherbeei_contig6365.1.1 vs. uniprot
Match: A0A6U2CVC5_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2CVC5_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.730e-23 Identity = 71/214 (33.18%), Postives = 112/214 (52.34%), Query Frame = 1
Query: 7 ALNALLDFMDGAGALFGQLCPDVAVEPPIRYNGGAGRGALEELFKTYAEAAFAAEGGTMPRLDRLQDLFGIKDSKANALSQKVMMNAVMRMMKD---------GGGEDGMKGLMNMLGGMPGMDGGXXXXXXXXXXXGGMDAAALKQQVSELKQMLENDEVGPMEVAELRQVYKQQ-GIDIDDLVRQTDP--ILDTLDEDARELFTIFKKLLQK 612
A+N ++DFMD A LF + P+ Y+G R L+ L+ TYA A E T R+D LQ+LF IKD KA L QK MM ++M+MMKD G +GM +M+ +GGM G G G + +K+ V +K+++E+ V E+ +++ +K Q G+DI +++ Q D + + L + EL +FK +L++
Sbjct: 84 AINVVMDFMDHAAGLFEPFLVEGVEIKPVTYSGTLPRSKLDNLYATYASAVMTTENVTQDRIDMLQELFEIKDKKAEGLVQKKMMGSLMKMMKDPEAMKDLENGPMGEGMAEMMSAMGGMDGAGG----LGMLGGGDGEVSPEEIKESVKLMKELVESGGVSKEEMDLVKEQFKAQYGMDIKEIIAQADSAEVKEQLGDQGEELIEMFKAILKQ 293
BLAST of mRNA_P-wetherbeei_contig6365.1.1 vs. uniprot
Match: A0A7S1G0E7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G0E7_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.300e-21 Identity = 86/217 (39.63%), Postives = 124/217 (57.14%), Query Frame = 1
Query: 1 VTALNALLDFMDGAGALF-GQLCPDVAVEPPIRYNGGAGRGALEELFKTYAEAAFAAEGG--TMPRLDRLQDLFGIKDSKANALSQKVMMNAVMRMMKDGGGEDGMKGLMNMLGGMPGMDGGXXXXXXXXXXXGGMDAAA---------LKQQVSELKQMLENDEVGPMEVAELRQVYKQQ-GIDIDDLVRQTD--PILDTLDEDARELFTIFKKLL 606
V AL+ ++DFM+ A LF G + +V +E + Y+G G+G LE+L+ YAE + A G +M RL LQ+L GIKD KA +SQK MM M+MM+DG EDG XXXXXXXXXXX GM A LKQ V+ +KQ++E+ + ++ +R+ + G+DI++L+ Q D + + L ED REL +FK++L
Sbjct: 26 VRALDVVIDFMNHAAELFLGVIGDEVTIEAVV-YSGSLGKGKLEQLYSAYAEGSMAGTKGKASMDRLGDLQNLLGIKDKKAEGISQKAMMKGFMKMMQDG--EDGEGDXXXXXXXXXXXXXXXXXXXXXXXXXXGMPGAEDMKEPSPEELKQGVAMMKQLVESGAISKDDLKAIREEFASNFGMDINELIEQADNPDVKEALGEDGRELLNLFKQVL 239
BLAST of mRNA_P-wetherbeei_contig6365.1.1 vs. uniprot
Match: A0A7S1Z1B7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z1B7_TRICV) HSP 1 Score: 92.0 bits (227), Expect = 2.840e-19 Identity = 53/118 (44.92%), Postives = 67/118 (56.78%), Query Frame = 1
Query: 10 LNALLDFMDGAGALFGQLCPDVAVEPPIRYNGGAGRGALEELFKTYAEAAFAAEGGTMPRLDRLQDLFGIKDSKANALSQKVMMNAVMRMMKD--------GGGEDGMKGLMNMLGGM 339
+N ++DFMD A LF + P+ Y G GR LE+L+ TYA A AEG T R+D LQ+LF IKD KA L QK MM +M+MMKD GG +GM +M +GGM
Sbjct: 122 INVVMDFMDHAAGLFEPFLVEGVSITPVTYGGTLGRNKLEQLYSTYASAVMTAEGVTQDRIDMLQELFEIKDKKAEGLVQKKMMANLMKMMKDPEAMKDLEGGMGEGMAEMMAAMGGM 239
BLAST of mRNA_P-wetherbeei_contig6365.1.1 vs. uniprot
Match: A0A7S4JJA8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JJA8_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 4.200e-17 Identity = 77/213 (36.15%), Postives = 116/213 (54.46%), Query Frame = 1
Query: 7 ALNALLDFMDGAGALFGQLCPDVAVEPPIRYNGGAGRGALEELFKTYAEAAFAAEGGTMPRLDRLQDLFGIKDSKANALSQKVMMNAVMRMMKDGGGEDGMKG--LMNMLGGMPGMDGGXXXXXXXXXXXGGMDAAA------LKQQVSELKQMLENDEVGPMEVAELRQVYK-QQGIDIDDLVRQ--TDPILDTLDEDARELFTIFKKLLQK 612
A+N ++DFMD A LF + P+ Y G R LE+L+ TYA E T R+D LQ+LF IKD KA L QK MM ++M+MMKD M+G + M+ XXXXXXXXXXX MD A +K+ V +K ++E+ V E+ +++ +K Q G+DI +++ Q +D + + L + EL +F+ +L++
Sbjct: 775 AINIVMDFMDHAAGLFEPFLVEGVELKPVTYGGALSRNKLEQLYATYATGVMTTESVTQDRIDMLQELFEIKDKKAEGLVQKKMMGSLMKMMKDPEAMKDMEGGPMAEMMXXXX-----XXXXXXXXXXXXXMDPNAEVSPEEIKESVKLMKDLIESGGVSKEEMDLVKEQFKVQYGMDIKEIIEQADSDEVKEQLGDQGEELIEMFQAILKQ 982 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6365.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6365.1.1 >prot_P-wetherbeei_contig6365.1.1 ID=prot_P-wetherbeei_contig6365.1.1|Name=mRNA_P-wetherbeei_contig6365.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=196bp MDGAGALFGQLCPDVAVEPPIRYNGGAGRGALEELFKTYAEAAFAAEGGTback to top mRNA from alignment at P-wetherbeei_contig6365:9..866+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6365.1.1 ID=mRNA_P-wetherbeei_contig6365.1.1|Name=mRNA_P-wetherbeei_contig6365.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig6365:9..866+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6365:9..866+ >mRNA_P-wetherbeei_contig6365.1.1 ID=mRNA_P-wetherbeei_contig6365.1.1|Name=mRNA_P-wetherbeei_contig6365.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=588bp|location=Sequence derived from alignment at P-wetherbeei_contig6365:9..866+ (Phaeothamnion wetherbeei SAG_119_79)back to top |