mRNA_P-wetherbeei_contig6318.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6318.1.1 vs. uniprot
Match: A0A6H5KTK2_9PHAE (VOC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTK2_9PHAE) HSP 1 Score: 175 bits (444), Expect = 4.100e-51 Identity = 82/115 (71.30%), Postives = 97/115 (84.35%), Query Frame = 2
Query: 191 RARNIILMLRDVSRATGFYGEHGLGLILRHSSDALAEFETGGTPLILKAASPGNEAVCSVGYSPLLCFDVADMESTVQRCLQMGAHLDGPIKYPAYGKVASLRSPDGHMIGLFEP 535
RAR++IL++RDV + FYGE GLGL L+HSSD +AEFETGGTPL+LK A+ +EA CSVGYSPLLCFDV DM+ VQR L MG HLDGPIKYPA+G VAS+RSPDGHM+GLF+P
Sbjct: 2 RARSVILLIRDVGKGVQFYGEGGLGLALKHSSDTMAEFETGGTPLVLKMAA--SEAACSVGYSPLLCFDVPDMDHAVQRALGMGGHLDGPIKYPAHGAVASIRSPDGHMVGLFQP 114
BLAST of mRNA_P-wetherbeei_contig6318.1.1 vs. uniprot
Match: W7TYR3_9STRA (VOC domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TYR3_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.520e-46 Identity = 77/118 (65.25%), Postives = 92/118 (77.97%), Query Frame = 2
Query: 185 MARARNIILMLRDVSRATGFYGEHGLGLILRHSSDALAEFETGGTPLILKAASPGNEAVCSVGYSPLLCFDVADMESTVQRCLQMGAHLDGPIKYPAYGKVASLRSPDGHMIGLFEPA 538
+A RN++LMLRD+ A FYG+ GLGL L SD AEF+TGGTPL+LK A EA+CS GYSPLLCFDV DM++T+ R LQ+GA LDGPIKYP YGK+ +RSPDGHMIGLFEP+
Sbjct: 5 LANFRNVVLMLRDLPSAVTFYGKEGLGLALTRRSDMTAEFDTGGTPLVLKVAD--GEAMCSTGYSPLLCFDVVDMDTTIVRLLQLGASLDGPIKYPLYGKIGMIRSPDGHMIGLFEPS 120
BLAST of mRNA_P-wetherbeei_contig6318.1.1 vs. uniprot
Match: K3WVE3_GLOUD (VOC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVE3_GLOUD) HSP 1 Score: 130 bits (326), Expect = 1.590e-33 Identity = 68/123 (55.28%), Postives = 87/123 (70.73%), Query Frame = 2
Query: 191 RARNIILMLRDVSRATGFYGEHGLGLILRHSSDALAEFET-GGTPLILKAASPGNEAVCSVGYSPLLCFDVADMESTVQRCLQMGAHLDGPIKYPAYGKVASLRSPDGHMIGLFEPAHFD*FT 556
R R ++++ RD++R+T F+ E GLGL L SSD AEF+ G PL +K A NEA CS GYSP L FD+ D+ TV R L MGA +DGPIKYPA+GKVA++RSPDG MIGL+EP ++ T
Sbjct: 2 RLRQVLILSRDLARSTRFFQE-GLGLKLLRSSDTFAEFDIKAGVPLCIKLAQ--NEAACSTGYSPFLNFDIQDLSDTVPRLLMMGAIMDGPIKYPAHGKVAAIRSPDGVMIGLYEPNSWENVT 121
BLAST of mRNA_P-wetherbeei_contig6318.1.1 vs. uniprot
Match: A0A1Y1I448_KLENI (VOC domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I448_KLENI) HSP 1 Score: 129 bits (323), Expect = 3.770e-33 Identity = 68/118 (57.63%), Postives = 82/118 (69.49%), Query Frame = 2
Query: 185 MARARNIILMLRDVSRATGFYGEHGLGLILRHSSDALAEFETGGTPLILKAASPGNEAVCSVGYSPLLCFDVADMESTVQRCLQMGAHLDGPIKYPAYGKVASLRSPDGHMIGLFEPA 538
MAR R I+L+ RDV RA FY E GLGL + SD AE ++G L LK +EA C+ GYSP L FDV D++ TVQR L +GA LDGPIKYP +GKVA++R PDGHM+GL EPA
Sbjct: 1 MARLRYIMLLQRDVPRAAKFYSE-GLGLTVNVCSDRWAELQSGDMKLALKQVD--SEAHCTTGYSPFLHFDVDDLDGTVQRLLSLGAFLDGPIKYPTHGKVAAMRGPDGHMLGLHEPA 115
BLAST of mRNA_P-wetherbeei_contig6318.1.1 vs. uniprot
Match: A0A5D6XRH0_9STRA (VOC domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRH0_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.210e-32 Identity = 67/123 (54.47%), Postives = 86/123 (69.92%), Query Frame = 2
Query: 191 RARNIILMLRDVSRATGFYGEHGLGLILRHSSDALAEFET-GGTPLILKAASPGNEAVCSVGYSPLLCFDVADMESTVQRCLQMGAHLDGPIKYPAYGKVASLRSPDGHMIGLFEPAHFD*FT 556
R R ++++ RDV+R+T F+ E GLGL L +SD AEF+T G L +K A NEA CS GYSP L FD D+ T+ R L +GA +DGPIKYPA+GKVA++RSPDG MIGL+EP +D T
Sbjct: 2 RLRQVLILSRDVARSTQFFQE-GLGLKLLRASDTFAEFDTQSGAALCIKLAQ--NEAACSAGYSPFLNFDTQDLSDTIPRLLMLGAIMDGPIKYPAHGKVAAVRSPDGVMIGLYEPNSWDNVT 121
BLAST of mRNA_P-wetherbeei_contig6318.1.1 vs. uniprot
Match: D0NG00_PHYIT (VOC domain-containing protein n=21 Tax=Peronosporaceae TaxID=4777 RepID=D0NG00_PHYIT) HSP 1 Score: 127 bits (319), Expect = 1.750e-32 Identity = 68/125 (54.40%), Postives = 88/125 (70.40%), Query Frame = 2
Query: 185 MARARNIILMLRDVSRATGFYGEHGLGLILRHSSDALAEFET-GGTPLILKAASPGNEAVCSVGYSPLLCFDVADMESTVQRCLQMGAHLDGPIKYPAYGKVASLRSPDGHMIGLFEPAHFD*FT 556
M+R R ++++ RD++R+ FY E GLGL L SSD AEF+T G PL +K A +EA CS GYSP L FD+ D+ V R L +GA +DGPIKYPA+GKVA+LRSPDG MIGL+EP ++ T
Sbjct: 1 MSRLRQLMVLSRDLARSKQFYQE-GLGLKLLRSSDTYAEFDTQAGVPLCIKLAQ--SEAACSSGYSPFLNFDIPDLSDAVPRLLMLGAIMDGPIKYPAHGKVAALRSPDGVMIGLYEPNSWENVT 122
BLAST of mRNA_P-wetherbeei_contig6318.1.1 vs. uniprot
Match: A0A8K1CQB9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQB9_PYTOL) HSP 1 Score: 126 bits (317), Expect = 3.350e-32 Identity = 67/123 (54.47%), Postives = 86/123 (69.92%), Query Frame = 2
Query: 191 RARNIILMLRDVSRATGFYGEHGLGLILRHSSDALAEFET-GGTPLILKAASPGNEAVCSVGYSPLLCFDVADMESTVQRCLQMGAHLDGPIKYPAYGKVASLRSPDGHMIGLFEPAHFD*FT 556
R R ++++ RD++R+T FY E GLGL L SSD AEF+T PL +K A +EA CS GYSP L FD+ D+ V R L +GA +DGPIKYPA+GKVA+LRSPDG MIGL+EP ++ T
Sbjct: 2 RLRQVLVLSRDLARSTQFYQE-GLGLKLLRSSDTFAEFDTRSSVPLCVKLAQ--SEAACSTGYSPFLNFDIQDLSEAVPRLLMLGAIMDGPIKYPAHGKVAALRSPDGVMIGLYEPNSWENVT 121
BLAST of mRNA_P-wetherbeei_contig6318.1.1 vs. uniprot
Match: A0A6A5BKG1_NAEFO (VOC domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BKG1_NAEFO) HSP 1 Score: 125 bits (315), Expect = 7.420e-32 Identity = 60/114 (52.63%), Postives = 82/114 (71.93%), Query Frame = 2
Query: 197 RNIILMLRDVSRATGFYGEHGLGLILRHSSDALAEFETGGTPLILKAASPGNEAVCSVGYSPLLCFDVADMESTVQRCLQMGAHLDGPIKYPAYGKVASLRSPDGHMIGLFEPA 538
+NI+L+++DV ++ FY E GLG+ + H S+ AE ++G + L EA C+ GYSP LCFDV M+ T+ + ++MGA LDGPIKYP++GKVASLRSPDGHM+GLFE A
Sbjct: 9 KNIMLLIKDVPKSVKFYSE-GLGMQVNHVSEHWAELQSGQMKVCLNKVE--GEAACTTGYSPFLCFDVTQMDKTIYKLIEMGAVLDGPIKYPSHGKVASLRSPDGHMLGLFEHA 119
BLAST of mRNA_P-wetherbeei_contig6318.1.1 vs. uniprot
Match: A0A7S2RR76_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RR76_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.370e-31 Identity = 63/119 (52.94%), Postives = 80/119 (67.23%), Query Frame = 2
Query: 185 MARARNIILMLRDVSRATGFYGEHGLGLILRHSSDALAEFETG---GTPLILKAASPGNEAVCSVGYSPLLCFDVADMESTVQRCLQMGAHLDGPIKYPAYGKVASLRSPDGHMIGLFE 532
M R R ++++ RDV FYG GLGL +R +SD+ AEF+ G GT L+ EA CS GYSP+L FDV DM+S + R + +G LDGPIKYP +GK+ASLRSP+G MIGLFE
Sbjct: 1 MIRFRRVLVLTRDVGECLNFYGSEGLGLRVRFASDSYAEFDCGDKHGTTFALQKVE--REAECSTGYSPMLHFDVEDMDSLIGRLIMLGGRLDGPIKYPVHGKLASLRSPNGQMIGLFE 117
BLAST of mRNA_P-wetherbeei_contig6318.1.1 vs. uniprot
Match: D2UXX0_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2UXX0_NAEGR) HSP 1 Score: 123 bits (308), Expect = 6.810e-31 Identity = 59/116 (50.86%), Postives = 84/116 (72.41%), Query Frame = 2
Query: 185 MARARNIILMLRDVSRATGFYGEHGLGLILRHSSDALAEFETGGTPLILKAASPGNEAVCSVGYSPLLCFDVADMESTVQRCLQMGAHLDGPIKYPAYGKVASLRSPDGHMIGLFE 532
+A +N++L+++DV ++ FY E GLG+ + HS++ AE ++G + L EA + GYSP LCFDV +M+ T+ + L+MGA LDGPIKYP++GKVA+LRSPDGHMIGLFE
Sbjct: 5 IASLKNVMLLIKDVPKSVKFYSE-GLGMTVNHSTEHWAELQSGHMKVCLNKVE--GEASSTTGYSPFLCFDVNEMDKTIYKLLEMGAILDGPIKYPSHGKVAALRSPDGHMIGLFE 117 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6318.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6318.1.1 >prot_P-wetherbeei_contig6318.1.1 ID=prot_P-wetherbeei_contig6318.1.1|Name=mRNA_P-wetherbeei_contig6318.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=122bp MARARNIILMLRDVSRATGFYGEHGLGLILRHSSDALAEFETGGTPLILKback to top mRNA from alignment at P-wetherbeei_contig6318:140..1448+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6318.1.1 ID=mRNA_P-wetherbeei_contig6318.1.1|Name=mRNA_P-wetherbeei_contig6318.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1309bp|location=Sequence derived from alignment at P-wetherbeei_contig6318:140..1448+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6318:140..1448+ >mRNA_P-wetherbeei_contig6318.1.1 ID=mRNA_P-wetherbeei_contig6318.1.1|Name=mRNA_P-wetherbeei_contig6318.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=366bp|location=Sequence derived from alignment at P-wetherbeei_contig6318:140..1448+ (Phaeothamnion wetherbeei SAG_119_79)back to top |