mRNA_P-wetherbeei_contig6170.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: A0A836CBB7_9STRA (Folate-biopterin transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBB7_9STRA) HSP 1 Score: 374 bits (959), Expect = 4.940e-123 Identity = 178/281 (63.35%), Postives = 223/281 (79.36%), Query Frame = 1
Query: 271 VPAVGLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREEVLPPGTAKSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKV 1113
V +G IM DVMADTLVVERAR E+ + +GQLQA+CYA+RF+GSVLGC +GAVVYN +WGWGL+F ++C + +P +LL + L E P K+V QC DIW TI LKAVW+PM+FVY+FN FQVPN+AW SFLQLSL F P++LGLMAT G++MT G++AYK+FFF VSWR IY SV + T F+ + + LIF+WN+KYLH+SN +FALGDDVIT+YIQG+QFLPVCIMYL+LCPDGSEGATY+MLTT GNIALVC++S+GT+LSK+
Sbjct: 147 VATIGQIMADVMADTLVVERARLEDTEQRGQLQATCYAVRFMGSVLGCLMGAVVYNQVQWGWGLSFRQVCLLTGALPLMLLGTTLWTLYEMAATP---KTVAQQCGDIWDTICLKAVWKPMAFVYVFNFFQVPNIAWQSFLQLSLHFEPYMLGLMATAGAVMTLLGIIAYKKFFFHVSWRHIYFTSVCVTTAFKLLQ-----MCLIFKWNEKYLHMSNLYFALGDDVITQYIQGVQFLPVCIMYLRLCPDGSEGATYAMLTTFGNIALVCSASVGTLLSKI 419
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: D7FZP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZP1_ECTSI) HSP 1 Score: 343 bits (881), Expect = 1.180e-110 Identity = 169/281 (60.14%), Postives = 217/281 (77.22%), Query Frame = 1
Query: 280 VGLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREEVLPPGTAKSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKVRLW 1122
+G IMGDVMADTLVVERAR E E+S+GQ+QA+CYAIRF G+V+GC GA+++N WGWGLTF ++C + +++P L+L PA+ +L EE K V+ Q RDIW TI L+AVWRPM+FVYIFN+FQVP++ W ++LQLSL F P++LG MA GS+MT GV AYK FF VSWRLIY WSV + T F ++ +L LIF N++ + L ++WFALGDDVIT+YIQG+QFLPVCIMYL++CP+GSEGATY+ LTT GNIAL CA S+GT+ +K LW
Sbjct: 199 MGQIMGDVMADTLVVERARGEAEESRGQMQATCYAIRFAGNVIGCLGGALLFNRGAWGWGLTFRQVCLIMSMMPVLVLGPAVVYLWEE--RSKETKGVKNQVRDIWDTIQLQAVWRPMAFVYIFNIFQVPHIPWQNYLQLSLHFQPYMLGFMAAAGSVMTCLGVTAYKNCFFHVSWRLIYGWSVVVTTIF-----SALQLVLIFGLNQR-IGLPDFWFALGDDVITQYIQGIQFLPVCIMYLRMCPNGSEGATYAALTTFGNIALNCAGSLGTLFAK--LW 469
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: A0A7S2XY88_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY88_9STRA) HSP 1 Score: 332 bits (850), Expect = 1.440e-106 Identity = 161/281 (57.30%), Postives = 209/281 (74.38%), Query Frame = 1
Query: 271 VPAVGLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREEVLPPGTAKSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKV 1113
V VGLIMGDVMAD+LVVER R EEE SKGQ QA+CYA+RF GSV GC G ++YN WGWGLTF ++C VN ++P ++L P + L E G KSV QC+D+W TI +AVW+PM+F+Y++NL QVPNVAW SFLQL LGF + +G+++T G+LM+F G++AYKRFFF+ SW+ IY WS ++ FF +IA LIF+ N+ +L LS+YWFALGD+VI YI G+QFLPVC MYLQLCP+GSEGATY+MLTT GN+A ++ G +L+ +
Sbjct: 155 VETVGLIMGDVMADSLVVERGRTEEEGSKGQAQATCYAVRFGGSVAGCLGGTLLYNSTNWGWGLTFPQVCLVNGVLPLVVLLPLLIPLWERQGSQG--KSVPQQCKDVWGTIEQRAVWQPMAFIYLYNLLQVPNVAWGSFLQLGLGFQAYGIGMLSTAGALMSFFGILAYKRFFFKSSWQGIYIWSTILVAFFSLCQIA-----LIFRVNETWLGLSDYWFALGDNVIAAYISGIQFLPVCAMYLQLCPEGSEGATYAMLTTFGNMAGTVSAVAGNLLAGI 428
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: A0A7S1TWA3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWA3_9STRA) HSP 1 Score: 325 bits (833), Expect = 7.210e-103 Identity = 160/284 (56.34%), Postives = 207/284 (72.89%), Query Frame = 1
Query: 271 VPAVGLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREEVLPPGTAKSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKVRLW 1122
V +G IM DVMADTL VER+R+E + +GQ+QA+CYA+RF GSVLG G +VYN WGWGL+F+++C V + P L + P + E+ L AKSV QCRDIW T++L AVW PM+FVYI+N+ Q+PNVAWSSFLQL LGF P+ LG+M T G++MTF G+VA+K+FFF+ SWR IY S + T F + L LIF N+ L +S+Y+FALGDDV++ YI G+QFLPVCIMY++LCP GSEGATY+MLTT+GNIAL ASS+G V + + W
Sbjct: 246 VATMGEIMVDVMADTLAVERSRYEPSEGRGQMQATCYALRFFGSVLGAGTGTLVYNKDAWGWGLSFAQVCFVLGVFPLLFVVPFAYMVWEKPLSEAGAKSVPEQCRDIWNTVTLDAVWMPMTFVYIYNVMQIPNVAWSSFLQLDLGFPPWALGIMTTTGAIMTFLGIVAFKKFFFKTSWRYIYISSTLLCTTFSLLQ-----LVLIFHLNRG-LGISDYFFALGDDVMSAYINGIQFLPVCIMYMKLCPGGSEGATYAMLTTLGNIALCVASSLGNVFTYIPGW 523
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: A0A7R9U5H3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5H3_9STRA) HSP 1 Score: 313 bits (802), Expect = 2.760e-98 Identity = 155/281 (55.16%), Postives = 201/281 (71.53%), Query Frame = 1
Query: 271 VPAVGLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREEVLPPGTAKSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKV 1113
V +G IM DVMADTLVVERA+FE E ++GQ QA+CYA+RF+GSVLG S G V +N WGWGLTF E+C + +P + P F+ E+ + KSV QC+DIW T+ LKAVW+PM+FVY +N+ Q+PNVAWSSFLQ+ L F P+ LG+M+T G++MT G++A+KRFFF SWR IY S + A + +L LIF N+ + LS+Y+FALGDDV+ YI G+QFLPVCIMY+ LCP GSEGATY+MLTT+GNIA A + G++LS V
Sbjct: 243 VATMGQIMVDVMADTLVVERAKFEPEATRGQTQATCYALRFVGSVLGASSGTVFFNAKAWGWGLTFGEVCLILGALPLFSVVPLAFFVWEKPIHEKGCKSVVEQCQDIWETVQLKAVWKPMAFVYTYNILQIPNVAWSSFLQIGLDFKPWALGIMSTAGAIMTLLGIMAFKRFFFHTSWRYIYISSTCL-----SAAFSLLQLVLIFHLNRAW-GLSDYFFALGDDVMAAYINGIQFLPVCIMYMSLCPGGSEGATYAMLTTLGNIASCVAFTFGSLLSHV 517
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: A0A6V1WMI5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WMI5_HETAK) HSP 1 Score: 270 bits (689), Expect = 2.380e-82 Identity = 133/279 (47.67%), Postives = 190/279 (68.10%), Query Frame = 1
Query: 280 VGLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREEV-LPPGTAKSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKV 1113
VG +M DVM D +VVER++ E +D +G +QA Y IRF+GS+LG ++GAV+YN WGWGLT ++ +NA VP ++L PA+A+LR+ L P V QCR+IW + + +W+PM+F++ +N+ Q+PN AWSSFL L F+ F +G+++ GS++++ G+V YK+FFF +WR IY W+ I FF + L LIFQ N+K+ + N WFALGDD E+I +QFLP+CIMYL LCP G+EG TYSMLTT N+A A IGT+++ +
Sbjct: 170 VGYMMADVMTDAIVVERSQHESDDERGTIQAQGYIIRFVGSILGSAMGAVLYNRDTWGWGLTTPQMFALNAFVPFVVLYPAMAYLRDASDLKPIP---VPIQCREIWGAVQKRNIWQPMAFIFAYNVMQIPNAAWSSFLIDGLNFSDFSIGVISVTGSVVSWLGLVVYKKFFFNTNWRGIYLWTTLITMFFSVLQ-----LVLIFQLNQKW-GIPNLWFALGDDAAAEFILAIQFLPMCIMYLGLCPGGAEGTTYSMLTTFSNVAGTVAYDIGTLMTHI 439
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: W7U054_9STRA (Folate biopterin transporter n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U054_9STRA) HSP 1 Score: 257 bits (657), Expect = 1.510e-77 Identity = 133/291 (45.70%), Postives = 201/291 (69.07%), Query Frame = 1
Query: 271 VPAVGLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREE------VLPPGTA----KSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKV 1113
+ +G++M D ++D ++VER+ E+ED G LQ+ Y +RF +VLG LG+VVYN W + L+F +I + L P L+L P+I+FL++ + G SV Q + IW T++L+ V++PM+F++I+NLFQVPNV+W+SFLQL+L FTP +LG ++ G LMTF G++ YKR+F R SWR +Y +S ++ A ++ +L LIF N+ YL +SN+ F+LGDDV+T +I G+QFLP+ I+Y++LCP GSEGATYSMLTT N+AL+ +S+G++LS +
Sbjct: 161 ISTMGMVMCDTISDAMIVERSTKEDEDDHGHLQSLVYTVRFGFAVLGSVLGSVVYN-ETWTYSLSFEKIMCLTGLAPLLVLLPSISFLKDMHRSLTGMAAGGVGIDDRPSVSHQLQQIWETVTLRVVFQPMTFIFIYNLFQVPNVSWNSFLQLTLDFTPVMLGALSFGGRLMTFVGILIYKRYFLRSSWRSVYIFSTCLL-----AVLSVLQLLLIFHINE-YLGISNFLFSLGDDVMTAFISGMQFLPLTIVYMKLCPGGSEGATYSMLTTFSNLALIVGNSLGSLLSLI 444
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: A0A835Z8G1_9STRA (Biopterin transport-related protein BT1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G1_9STRA) HSP 1 Score: 242 bits (617), Expect = 3.160e-72 Identity = 126/283 (44.52%), Postives = 182/283 (64.31%), Query Frame = 1
Query: 283 GLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREEVLPP---GTAKSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKVRLW 1122
G +M DV D ++VER++ E E+++G +QA+ YA RF GS+LG LG VYN WGWG+T E+ +N L P L++AP + LRE P A ++RAQC I+ +SL++V+ PM+ V+ +NLFQVPN AW SFL L F F LGL+ +GSL + G++AYKR F WR IY + + FF + L LIF+ N+++ + + FALGDD + E++ +QFLPVC MY+ +CP+G+EG TY++LTT+ N+A + SIGT+L+ LW
Sbjct: 115 GFMMSDVTTDAIIVERSKNEPEETRGSMQATGYATRFCGSLLGSVLGTCVYNKERWGWGMTIGEVFLLNGLFPLLVVAPFMWTLRESAYVPRPGDRAAALRAQCDAIFTALSLRSVFVPMAVVFTYNLFQVPNAAWRSFLVEGLKFESFDLGLIGIVGSLFSSCGLIAYKRCFMGTGWRTIYRVTTTLTCFFSVVQ-----LLLIFRVNQRF-GVGDLAFALGDDALAEFVSAIQFLPVCQMYISMCPEGTEGTTYAILTTLSNVAGAVSFSIGTLLT--HLW 389
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: A0A7S3GWX4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWX4_9STRA) HSP 1 Score: 234 bits (596), Expect = 8.590e-71 Identity = 109/178 (61.24%), Postives = 139/178 (78.09%), Query Frame = 1
Query: 580 QCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKV 1113
Q DIW T+ LK+VWRPM FVY +NL Q+PNVAW S+LQL+L F P++LGL +GS MT AGV AYK +FF+ SWR IY ++ + TFF +I LIFQWN YLH+SNY+F+LGDDVI+ YI G+QFLPVCIMY++LCPDG+EGA+YSMLTT GNIALVCAS++G +++ +
Sbjct: 129 QLNDIWETVQLKSVWRPMLFVYTYNLLQIPNVAWQSYLQLTLHFPPWILGLTVILGSFMTLAGVSAYKHYFFKTSWRSIYVGTMFLTTFFSLLQIV-----LIFQWNTTYLHMSNYFFSLGDDVISAYINGIQFLPVCIMYMRLCPDGAEGASYSMLTTFGNIALVCASNLGNLMAGI 301
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: D7G1P4_ECTSI (Biopterin transport-related protein BT1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P4_ECTSI) HSP 1 Score: 240 bits (612), Expect = 9.340e-71 Identity = 115/285 (40.35%), Postives = 189/285 (66.32%), Query Frame = 1
Query: 271 VPAVGLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREE-VLPPGTA---KSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKV 1113
+ ++G ++ DV D ++VER++ E +++G +QA Y++RF+GS+LG ++G ++YN EWGWGL+ ++ +NA+ P L + P + LRE V+ G + +R QC +++ + KAV+ PM ++I+NL QVPN AW SFL + L F+ F LG++ IGSLM G++AYK++FF SWR +Y W+ I++FF +I LI + NK + + + F++GDD I +++ +QFLPV MY+ +CPDG+EG TY++LTTM N++L A ++GT+ + +
Sbjct: 177 IMSMGFMLSDVTTDAILVERSKHEPAETRGSMQAIGYSVRFVGSLLGSTMGLLLYNKDEWGWGLSIQQLFFLNAIFPVLFMGPWVWSLRETAVVTDGNVPIEQRLRQQCTEVFRALEQKAVYGPMGLIFIYNLLQVPNAAWRSFLVIGLSFSNFELGVLGVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQIL-----LILRVNKMF-GIGDLVFSVGDDCIADFVSSIQFLPVVQMYIAMCPDGAEGTTYAILTTMSNVSLAAAFTLGTLFTGI 455 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6170.1.2 >prot_P-wetherbeei_contig6170.1.2 ID=prot_P-wetherbeei_contig6170.1.2|Name=mRNA_P-wetherbeei_contig6170.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=286bp MGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGback to top mRNA from alignment at P-wetherbeei_contig6170:5..3296+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6170.1.2 ID=mRNA_P-wetherbeei_contig6170.1.2|Name=mRNA_P-wetherbeei_contig6170.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3292bp|location=Sequence derived from alignment at P-wetherbeei_contig6170:5..3296+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6170:5..3296+ >mRNA_P-wetherbeei_contig6170.1.2 ID=mRNA_P-wetherbeei_contig6170.1.2|Name=mRNA_P-wetherbeei_contig6170.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig6170:5..3296+ (Phaeothamnion wetherbeei SAG_119_79)back to top |