mRNA_P-wetherbeei_contig6170.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6170.1.2
Unique NamemRNA_P-wetherbeei_contig6170.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: A0A836CBB7_9STRA (Folate-biopterin transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBB7_9STRA)

HSP 1 Score: 374 bits (959), Expect = 4.940e-123
Identity = 178/281 (63.35%), Postives = 223/281 (79.36%), Query Frame = 1
Query:  271 VPAVGLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREEVLPPGTAKSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKV 1113
            V  +G IM DVMADTLVVERAR E+ + +GQLQA+CYA+RF+GSVLGC +GAVVYN  +WGWGL+F ++C +   +P +LL   +  L E    P   K+V  QC DIW TI LKAVW+PM+FVY+FN FQVPN+AW SFLQLSL F P++LGLMAT G++MT  G++AYK+FFF VSWR IY  SV + T F+  +     + LIF+WN+KYLH+SN +FALGDDVIT+YIQG+QFLPVCIMYL+LCPDGSEGATY+MLTT GNIALVC++S+GT+LSK+
Sbjct:  147 VATIGQIMADVMADTLVVERARLEDTEQRGQLQATCYAVRFMGSVLGCLMGAVVYNQVQWGWGLSFRQVCLLTGALPLMLLGTTLWTLYEMAATP---KTVAQQCGDIWDTICLKAVWKPMAFVYVFNFFQVPNIAWQSFLQLSLHFEPYMLGLMATAGAVMTLLGIIAYKKFFFHVSWRHIYFTSVCVTTAFKLLQ-----MCLIFKWNEKYLHMSNLYFALGDDVITQYIQGVQFLPVCIMYLRLCPDGSEGATYAMLTTFGNIALVCSASVGTLLSKI 419          
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: D7FZP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZP1_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 1.180e-110
Identity = 169/281 (60.14%), Postives = 217/281 (77.22%), Query Frame = 1
Query:  280 VGLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREEVLPPGTAKSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKVRLW 1122
            +G IMGDVMADTLVVERAR E E+S+GQ+QA+CYAIRF G+V+GC  GA+++N   WGWGLTF ++C + +++P L+L PA+ +L EE       K V+ Q RDIW TI L+AVWRPM+FVYIFN+FQVP++ W ++LQLSL F P++LG MA  GS+MT  GV AYK  FF VSWRLIY WSV + T F     ++ +L LIF  N++ + L ++WFALGDDVIT+YIQG+QFLPVCIMYL++CP+GSEGATY+ LTT GNIAL CA S+GT+ +K  LW
Sbjct:  199 MGQIMGDVMADTLVVERARGEAEESRGQMQATCYAIRFAGNVIGCLGGALLFNRGAWGWGLTFRQVCLIMSMMPVLVLGPAVVYLWEE--RSKETKGVKNQVRDIWDTIQLQAVWRPMAFVYIFNIFQVPHIPWQNYLQLSLHFQPYMLGFMAAAGSVMTCLGVTAYKNCFFHVSWRLIYGWSVVVTTIF-----SALQLVLIFGLNQR-IGLPDFWFALGDDVITQYIQGIQFLPVCIMYLRMCPNGSEGATYAALTTFGNIALNCAGSLGTLFAK--LW 469          
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: A0A7S2XY88_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY88_9STRA)

HSP 1 Score: 332 bits (850), Expect = 1.440e-106
Identity = 161/281 (57.30%), Postives = 209/281 (74.38%), Query Frame = 1
Query:  271 VPAVGLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREEVLPPGTAKSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKV 1113
            V  VGLIMGDVMAD+LVVER R EEE SKGQ QA+CYA+RF GSV GC  G ++YN   WGWGLTF ++C VN ++P ++L P +  L E     G  KSV  QC+D+W TI  +AVW+PM+F+Y++NL QVPNVAW SFLQL LGF  + +G+++T G+LM+F G++AYKRFFF+ SW+ IY WS  ++ FF   +IA     LIF+ N+ +L LS+YWFALGD+VI  YI G+QFLPVC MYLQLCP+GSEGATY+MLTT GN+A   ++  G +L+ +
Sbjct:  155 VETVGLIMGDVMADSLVVERGRTEEEGSKGQAQATCYAVRFGGSVAGCLGGTLLYNSTNWGWGLTFPQVCLVNGVLPLVVLLPLLIPLWERQGSQG--KSVPQQCKDVWGTIEQRAVWQPMAFIYLYNLLQVPNVAWGSFLQLGLGFQAYGIGMLSTAGALMSFFGILAYKRFFFKSSWQGIYIWSTILVAFFSLCQIA-----LIFRVNETWLGLSDYWFALGDNVIAAYISGIQFLPVCAMYLQLCPEGSEGATYAMLTTFGNMAGTVSAVAGNLLAGI 428          
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: A0A7S1TWA3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWA3_9STRA)

HSP 1 Score: 325 bits (833), Expect = 7.210e-103
Identity = 160/284 (56.34%), Postives = 207/284 (72.89%), Query Frame = 1
Query:  271 VPAVGLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREEVLPPGTAKSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKVRLW 1122
            V  +G IM DVMADTL VER+R+E  + +GQ+QA+CYA+RF GSVLG   G +VYN   WGWGL+F+++C V  + P L + P    + E+ L    AKSV  QCRDIW T++L AVW PM+FVYI+N+ Q+PNVAWSSFLQL LGF P+ LG+M T G++MTF G+VA+K+FFF+ SWR IY  S  + T F   +     L LIF  N+  L +S+Y+FALGDDV++ YI G+QFLPVCIMY++LCP GSEGATY+MLTT+GNIAL  ASS+G V + +  W
Sbjct:  246 VATMGEIMVDVMADTLAVERSRYEPSEGRGQMQATCYALRFFGSVLGAGTGTLVYNKDAWGWGLSFAQVCFVLGVFPLLFVVPFAYMVWEKPLSEAGAKSVPEQCRDIWNTVTLDAVWMPMTFVYIYNVMQIPNVAWSSFLQLDLGFPPWALGIMTTTGAIMTFLGIVAFKKFFFKTSWRYIYISSTLLCTTFSLLQ-----LVLIFHLNRG-LGISDYFFALGDDVMSAYINGIQFLPVCIMYMKLCPGGSEGATYAMLTTLGNIALCVASSLGNVFTYIPGW 523          
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: A0A7R9U5H3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5H3_9STRA)

HSP 1 Score: 313 bits (802), Expect = 2.760e-98
Identity = 155/281 (55.16%), Postives = 201/281 (71.53%), Query Frame = 1
Query:  271 VPAVGLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREEVLPPGTAKSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKV 1113
            V  +G IM DVMADTLVVERA+FE E ++GQ QA+CYA+RF+GSVLG S G V +N   WGWGLTF E+C +   +P   + P   F+ E+ +     KSV  QC+DIW T+ LKAVW+PM+FVY +N+ Q+PNVAWSSFLQ+ L F P+ LG+M+T G++MT  G++A+KRFFF  SWR IY  S  +      A  +  +L LIF  N+ +  LS+Y+FALGDDV+  YI G+QFLPVCIMY+ LCP GSEGATY+MLTT+GNIA   A + G++LS V
Sbjct:  243 VATMGQIMVDVMADTLVVERAKFEPEATRGQTQATCYALRFVGSVLGASSGTVFFNAKAWGWGLTFGEVCLILGALPLFSVVPLAFFVWEKPIHEKGCKSVVEQCQDIWETVQLKAVWKPMAFVYTYNILQIPNVAWSSFLQIGLDFKPWALGIMSTAGAIMTLLGIMAFKRFFFHTSWRYIYISSTCL-----SAAFSLLQLVLIFHLNRAW-GLSDYFFALGDDVMAAYINGIQFLPVCIMYMSLCPGGSEGATYAMLTTLGNIASCVAFTFGSLLSHV 517          
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: A0A6V1WMI5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WMI5_HETAK)

HSP 1 Score: 270 bits (689), Expect = 2.380e-82
Identity = 133/279 (47.67%), Postives = 190/279 (68.10%), Query Frame = 1
Query:  280 VGLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREEV-LPPGTAKSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKV 1113
            VG +M DVM D +VVER++ E +D +G +QA  Y IRF+GS+LG ++GAV+YN   WGWGLT  ++  +NA VP ++L PA+A+LR+   L P     V  QCR+IW  +  + +W+PM+F++ +N+ Q+PN AWSSFL   L F+ F +G+++  GS++++ G+V YK+FFF  +WR IY W+  I  FF   +     L LIFQ N+K+  + N WFALGDD   E+I  +QFLP+CIMYL LCP G+EG TYSMLTT  N+A   A  IGT+++ +
Sbjct:  170 VGYMMADVMTDAIVVERSQHESDDERGTIQAQGYIIRFVGSILGSAMGAVLYNRDTWGWGLTTPQMFALNAFVPFVVLYPAMAYLRDASDLKPIP---VPIQCREIWGAVQKRNIWQPMAFIFAYNVMQIPNAAWSSFLIDGLNFSDFSIGVISVTGSVVSWLGLVVYKKFFFNTNWRGIYLWTTLITMFFSVLQ-----LVLIFQLNQKW-GIPNLWFALGDDAAAEFILAIQFLPMCIMYLGLCPGGAEGTTYSMLTTFSNVAGTVAYDIGTLMTHI 439          
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: W7U054_9STRA (Folate biopterin transporter n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U054_9STRA)

HSP 1 Score: 257 bits (657), Expect = 1.510e-77
Identity = 133/291 (45.70%), Postives = 201/291 (69.07%), Query Frame = 1
Query:  271 VPAVGLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREE------VLPPGTA----KSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKV 1113
            +  +G++M D ++D ++VER+  E+ED  G LQ+  Y +RF  +VLG  LG+VVYN   W + L+F +I  +  L P L+L P+I+FL++       +   G       SV  Q + IW T++L+ V++PM+F++I+NLFQVPNV+W+SFLQL+L FTP +LG ++  G LMTF G++ YKR+F R SWR +Y +S  ++     A ++  +L LIF  N+ YL +SN+ F+LGDDV+T +I G+QFLP+ I+Y++LCP GSEGATYSMLTT  N+AL+  +S+G++LS +
Sbjct:  161 ISTMGMVMCDTISDAMIVERSTKEDEDDHGHLQSLVYTVRFGFAVLGSVLGSVVYN-ETWTYSLSFEKIMCLTGLAPLLVLLPSISFLKDMHRSLTGMAAGGVGIDDRPSVSHQLQQIWETVTLRVVFQPMTFIFIYNLFQVPNVSWNSFLQLTLDFTPVMLGALSFGGRLMTFVGILIYKRYFLRSSWRSVYIFSTCLL-----AVLSVLQLLLIFHINE-YLGISNFLFSLGDDVMTAFISGMQFLPLTIVYMKLCPGGSEGATYSMLTTFSNLALIVGNSLGSLLSLI 444          
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: A0A835Z8G1_9STRA (Biopterin transport-related protein BT1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G1_9STRA)

HSP 1 Score: 242 bits (617), Expect = 3.160e-72
Identity = 126/283 (44.52%), Postives = 182/283 (64.31%), Query Frame = 1
Query:  283 GLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREEVLPP---GTAKSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKVRLW 1122
            G +M DV  D ++VER++ E E+++G +QA+ YA RF GS+LG  LG  VYN   WGWG+T  E+  +N L P L++AP +  LRE    P     A ++RAQC  I+  +SL++V+ PM+ V+ +NLFQVPN AW SFL   L F  F LGL+  +GSL +  G++AYKR F    WR IY  +  +  FF   +     L LIF+ N+++  + +  FALGDD + E++  +QFLPVC MY+ +CP+G+EG TY++LTT+ N+A   + SIGT+L+   LW
Sbjct:  115 GFMMSDVTTDAIIVERSKNEPEETRGSMQATGYATRFCGSLLGSVLGTCVYNKERWGWGMTIGEVFLLNGLFPLLVVAPFMWTLRESAYVPRPGDRAAALRAQCDAIFTALSLRSVFVPMAVVFTYNLFQVPNAAWRSFLVEGLKFESFDLGLIGIVGSLFSSCGLIAYKRCFMGTGWRTIYRVTTTLTCFFSVVQ-----LLLIFRVNQRF-GVGDLAFALGDDALAEFVSAIQFLPVCQMYISMCPEGTEGTTYAILTTLSNVAGAVSFSIGTLLT--HLW 389          
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: A0A7S3GWX4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWX4_9STRA)

HSP 1 Score: 234 bits (596), Expect = 8.590e-71
Identity = 109/178 (61.24%), Postives = 139/178 (78.09%), Query Frame = 1
Query:  580 QCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKV 1113
            Q  DIW T+ LK+VWRPM FVY +NL Q+PNVAW S+LQL+L F P++LGL   +GS MT AGV AYK +FF+ SWR IY  ++ + TFF   +I      LIFQWN  YLH+SNY+F+LGDDVI+ YI G+QFLPVCIMY++LCPDG+EGA+YSMLTT GNIALVCAS++G +++ +
Sbjct:  129 QLNDIWETVQLKSVWRPMLFVYTYNLLQIPNVAWQSYLQLTLHFPPWILGLTVILGSFMTLAGVSAYKHYFFKTSWRSIYVGTMFLTTFFSLLQIV-----LIFQWNTTYLHMSNYFFSLGDDVISAYINGIQFLPVCIMYMRLCPDGAEGASYSMLTTFGNIALVCASNLGNLMAGI 301          
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Match: D7G1P4_ECTSI (Biopterin transport-related protein BT1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P4_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 9.340e-71
Identity = 115/285 (40.35%), Postives = 189/285 (66.32%), Query Frame = 1
Query:  271 VPAVGLIMGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNGAEWGWGLTFSEICTVNALVPALLLAPAIAFLREE-VLPPGTA---KSVRAQCRDIWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMATIGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIFQWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATYSMLTTMGNIALVCASSIGTVLSKV 1113
            + ++G ++ DV  D ++VER++ E  +++G +QA  Y++RF+GS+LG ++G ++YN  EWGWGL+  ++  +NA+ P L + P +  LRE  V+  G     + +R QC +++  +  KAV+ PM  ++I+NL QVPN AW SFL + L F+ F LG++  IGSLM   G++AYK++FF  SWR +Y W+  I++FF   +I      LI + NK +  + +  F++GDD I +++  +QFLPV  MY+ +CPDG+EG TY++LTTM N++L  A ++GT+ + +
Sbjct:  177 IMSMGFMLSDVTTDAILVERSKHEPAETRGSMQAIGYSVRFVGSLLGSTMGLLLYNKDEWGWGLSIQQLFFLNAIFPVLFMGPWVWSLRETAVVTDGNVPIEQRLRQQCTEVFRALEQKAVYGPMGLIFIYNLLQVPNAAWRSFLVIGLSFSNFELGVLGVIGSLMASLGLLAYKKWFFHSSWRKLYVWTTLIVSFFSAFQIL-----LILRVNKMF-GIGDLVFSVGDDCIADFVSSIQFLPVVQMYIAMCPDGAEGTTYAILTTMSNVSLAAAFTLGTLFTGI 455          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6170.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBB7_9STRA4.940e-12363.35Folate-biopterin transporter n=1 Tax=Tribonema min... [more]
D7FZP1_ECTSI1.180e-11060.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2XY88_9STRA1.440e-10657.30Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1TWA3_9STRA7.210e-10356.34Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9U5H3_9STRA2.760e-9855.16Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6V1WMI5_HETAK2.380e-8247.67Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7U054_9STRA1.510e-7745.70Folate biopterin transporter n=1 Tax=Nannochlorops... [more]
A0A835Z8G1_9STRA3.160e-7244.52Biopterin transport-related protein BT1 n=1 Tax=Tr... [more]
A0A7S3GWX4_9STRA8.590e-7161.24Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
D7G1P4_ECTSI9.340e-7140.35Biopterin transport-related protein BT1 n=2 Tax=Ec... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6170contigP-wetherbeei_contig6170:5..3296 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FZP1
PFAMsBT1
Model size1149
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons8
Evalue2.52e-111
EggNOG OGs29S8M@1|root,2RXD7@2759|Eukaryota
DescriptionBT1 family
Cds size858
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6170.1.2prot_P-wetherbeei_contig6170.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6170 296..3296 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186894.0218277-UTR-P-wetherbeei_contig6170:4..2951683186894.0218277-UTR-P-wetherbeei_contig6170:4..295Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6170 5..295 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186894.0336144-CDS-P-wetherbeei_contig6170:295..3931683186894.0336144-CDS-P-wetherbeei_contig6170:295..393Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6170 296..393 +
1683186894.048216-CDS-P-wetherbeei_contig6170:842..9271683186894.048216-CDS-P-wetherbeei_contig6170:842..927Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6170 843..927 +
1683186894.063155-CDS-P-wetherbeei_contig6170:1204..13931683186894.063155-CDS-P-wetherbeei_contig6170:1204..1393Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6170 1205..1393 +
1683186894.0721624-CDS-P-wetherbeei_contig6170:1655..17581683186894.0721624-CDS-P-wetherbeei_contig6170:1655..1758Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6170 1656..1758 +
1683186894.081776-CDS-P-wetherbeei_contig6170:2031..21411683186894.081776-CDS-P-wetherbeei_contig6170:2031..2141Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6170 2032..2141 +
1683186894.092253-CDS-P-wetherbeei_contig6170:2447..25301683186894.092253-CDS-P-wetherbeei_contig6170:2447..2530Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6170 2448..2530 +
1683186894.103262-CDS-P-wetherbeei_contig6170:2819..28681683186894.103262-CDS-P-wetherbeei_contig6170:2819..2868Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6170 2820..2868 +
1683186894.114122-CDS-P-wetherbeei_contig6170:3155..32961683186894.114122-CDS-P-wetherbeei_contig6170:3155..3296Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6170 3156..3296 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6170.1.2

>prot_P-wetherbeei_contig6170.1.2 ID=prot_P-wetherbeei_contig6170.1.2|Name=mRNA_P-wetherbeei_contig6170.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=286bp
MGDVMADTLVVERARFEEEDSKGQLQASCYAIRFLGSVLGCSLGAVVYNG
AEWGWGLTFSEICTVNALVPALLLAPAIAFLREEVLPPGTAKSVRAQCRD
IWATISLKAVWRPMSFVYIFNLFQVPNVAWSSFLQLSLGFTPFLLGLMAT
IGSLMTFAGVVAYKRFFFRVSWRLIYAWSVGIITFFRRAEIASQRLALIF
QWNKKYLHLSNYWFALGDDVITEYIQGLQFLPVCIMYLQLCPDGSEGATY
SMLTTMGNIALVCASSIGTVLSKVRLWLFIDQFRS*
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mRNA from alignment at P-wetherbeei_contig6170:5..3296+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6170.1.2 ID=mRNA_P-wetherbeei_contig6170.1.2|Name=mRNA_P-wetherbeei_contig6170.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3292bp|location=Sequence derived from alignment at P-wetherbeei_contig6170:5..3296+ (Phaeothamnion wetherbeei SAG_119_79)
ATCTCTCCTCAATCTCCCCGCCTCGCTTTTACTTCCTTTTCTCGCCGTCG CGGGCCGGACTGATGGATGGACGGATTACGACCGGCGTTGAATCGGACGG TCGGGCACCTTTGCTCCCACGACGGCGGTGACACTCGATGACGGCGGCGA AACATCACTGTTACCGGTTGGGATCCACACACCACAATCCGCGATGGTGA CAATTACGGCAATGCTCAACAACGGGTGCGGCGGGCGCGGGTGCGGCTGC GACGGGTGCGGCGGCGGCGGGTGCCGGCAGTGGGGCTGATCATGGGGGAT GTCATGGCCGACACACTTGTGGTGGAGCGGGCACGCTTCGAGGAGGAGGA CAGCAAAGGCCAGCTACAGGCCTCGTGCTACGCGATCAGGTAAGGGGAAA TCTCGTGTGATGGGACCTCTTTGTTGCGCATTCTGGCGAAAATTTTGTAT TTCGGCTATGTCTGGGAATAGAGCGGCACAGTGGAGCTTATGCCTTCGTC GTTCTTCCTCCAAGAACCGTAGAATTGGCAATATCGTGTAGTCTTCGTTG GGCCCGTGCCCGGGTTGCCTGCTCTTGATCTGTTTTCCTTCGAGTTTCTC TGTTTACAATGTGTTCTGTCGCTGCCCTGCCTTCTACTAAATGATTACCA TGATTGTATTCCGTACGTCATAACAGAAATATTTCTGCAAAGAAGCAAAC CACATTTCTGCTCTACCCTCGTTGAAATGTGTGTTATGCTTTTCCTCTCT TCGCGCTTGCTGATCGAAAATAGCCCGTTTGCGCCCTCGCCTCCCCGCGG AATCGCGGGTTGCCTGGCGGCGTCGGAATGTCCGACAGGTTCCTGGGGTC CGTCTTGGGCTGCTCGCTCGGTGCGGTGGTCTACAATGGGGCCGAGTGGG GCTGGGGGCTCACCTTTTCCGAGGTAAGAAAAGAGAGCCGCCGACTTGGC TGTTTTCGGTCCTCGGATCACTCGCTTTTGCCTCGTGTTGCGCGTGAGCC TGCTTCCCACTTTGGAACGGCTGCAAAATGCGTCGTGTTGTCGCTCTGCC CAGGTGGATCGGTGGACCACGTACCCCCTTTTTCCCATTTCGACCTTAGC CGCCCGACATTTGCCGCTGGTCGACCGGCCACTGCCCCGCCTGCCGCTTC GCGCCAGCCGGGGACCAACCGAATCGAATCAGCCCGTCCCGTTCTGCCAG ATCTGCACAGTGAACGCGTTGGTGCCGGCGCTGCTCCTGGCGCCGGCTAT CGCCTTCCTGCGGGAGGAGGTGCTCCCGCCGGGGACGGCCAAGAGCGTGC GGGCGCAGTGCCGCGACATCTGGGCGACCATCAGCCTCAAGGCCGTGTGG CGGCCAATGTCCTTCGTCTACATATTCAATCTCTTCCAGGTTCGTCTATT TGTGCGTTTTTGCTGTGCTCGCAGGGCGTGCGGAGACGCGGCTAGGCGGG TGGGCGGGCAGGGGTGCAAGGTTGTCGATGGTAGGAGGGGCGGAGGGGCA CGGGGGTGGAAGTCACAAGGCTGTGTGTGCGCACCGTGTTCTCTCGTTTG AAGGGGCACCGGAGCATCCCCGCCAAAACATACCTAGAGTACCAGAAAAG TCTAACAGCATTTCGCAAACTCTCTTTTGCGGATCGAACTGGGGCGGGCA GGTGCCAAACGTGGCGTGGTCGAGCTTCCTGCAGCTGTCGCTCGGCTTCA CGCCCTTCCTCCTCGGGCTCATGGCCACCATCGGCAGCCTCATGACCTTT GCAGGTGCAGTTTTGGGACTAGTGGCGAGTCTGCAAGAAACATCTGGCTT TTTGCTTTGAGCTGTTGCGTTGCCACGGTTCTCTAGAATGGATGAAGGAT TGTACGGAGGTTATCTCTTGTAGCTCCTTCAGCGTCCTCCTGCGTCGACC AGCCCCGTTCTCTGTTTTGCCGTGTTCTGTTCTGAATGACCCAGTTGCCC CTTATCTCCCCGGGCTTGAACTCATGGCTTCCGAGACCCGCCGCTGCCTA CATTCCTGTGCGTTCTCGCGCTCGCAGGTGTCGTGGCGTATAAGCGGTTT TTCTTCCGTGTCTCGTGGCGCCTCATCTATGCTTGGAGCGTCGGCATCAT CACCTTCTTCAGGCGAGCCGAGATAGCCTCCCAGAGGGTTGCAAACGCAA ACCGTTACGGTTCTATGCACCCGAGACGGCCGATTCGTTTGTTTGCTTGT TGTGTAGAGGGTATGCTCTCGCTGGCGATGATCGTAAGGGTTTGTCGTTT TGGTCATCAACGGAACTATGAAGCATTTTGGGGCTGTTGGTGGTGGCATT CAACAGTTGCGCTGTCTGCTCATCTGGCTCGTAGATTTGCTCATGGCTTT GGCCCGTAGCCGTGTATACCATGCGGACCATACTGACCGCTTGTTTTCGA GTCTCCCGTCCGTCCGTCTTCCTCTCCATGTAGTCTGGCGCAGCTGGCGC TCATCTTCCAGTGGAACAAGAAGTACCTCCACCTCAGCAACTACTGGTTC GCCCTCGGCGATGACGTCATCACGGAGTGAGTCGGAGTCGGGCGCTATCC GGCCGGCCATTTTTTCTTTAGTATACCTTTCCGCGGGGAAAGATCCAGTT TTTACGCTTGCTGCCGGGGGGGAAGATATTCGAGACTATAGCTTTCCTGC GACTGCCCAGCCTGCTTTGCCCCTGAGCGGTCGAGTAAACGTAAAGGGCC ATCTTTCCAGCCTTGTTTGCGCATGGAAGACCTCAGCCACTGTGCAGTGC ACTTTAAACTGATCTCGTGCTTCGTTTTTTGCTCTCGTATCCCACGTACG CCTTGTATGCCGCAGGTACATCCAGGGCTTGCAGTTCCTTCCCGTGTGCA TCATGTATCTCCAGGTGTGTGTCGCGCTGCACGATCCCCGCTGGAATGTA TTGCGGAAATAGTTGGCTGCAGAGGGCCGGTGCAGTGTTCATTGCAATCG CAGCCTCTGCGGTGCCCTCGCCAACACCCGCCACCGTCTTCACCGCCTGC CGGCTGTCGTAACCGTTTTTGGCAACCCCACCGCCGCACCGCCATCGTCG TCCCCGCGGCCGCCGCCGTCGCACCTGCCATCATCGCCGCTGCGGCTTTC TTTCTCGCCACCGCATGCTCTCCCCATCATGACGTCGCTGGATGCCTGCA GCTGTGCCCTGACGGCAGCGAGGGCGCGACGTACTCGATGCTGACGACGA TGGGCAACATCGCCCTCGTCTGCGCCAGCAGTATCGGCACAGTGTTGAGC AAGGTGCGTCTCTGGTTGTTTATAGACCAGTTTCGGAGTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6170:5..3296+

>mRNA_P-wetherbeei_contig6170.1.2 ID=mRNA_P-wetherbeei_contig6170.1.2|Name=mRNA_P-wetherbeei_contig6170.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig6170:5..3296+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGGATGTCATGGCCGACACACTTGTGGTGGAGCGGGCACGCTTCGA
GGAGGAGGACAGCAAAGGCCAGCTACAGGCCTCGTGCTACGCGATCAGGT
TCCTGGGGTCCGTCTTGGGCTGCTCGCTCGGTGCGGTGGTCTACAATGGG
GCCGAGTGGGGCTGGGGGCTCACCTTTTCCGAGATCTGCACAGTGAACGC
GTTGGTGCCGGCGCTGCTCCTGGCGCCGGCTATCGCCTTCCTGCGGGAGG
AGGTGCTCCCGCCGGGGACGGCCAAGAGCGTGCGGGCGCAGTGCCGCGAC
ATCTGGGCGACCATCAGCCTCAAGGCCGTGTGGCGGCCAATGTCCTTCGT
CTACATATTCAATCTCTTCCAGGTGCCAAACGTGGCGTGGTCGAGCTTCC
TGCAGCTGTCGCTCGGCTTCACGCCCTTCCTCCTCGGGCTCATGGCCACC
ATCGGCAGCCTCATGACCTTTGCAGGTGTCGTGGCGTATAAGCGGTTTTT
CTTCCGTGTCTCGTGGCGCCTCATCTATGCTTGGAGCGTCGGCATCATCA
CCTTCTTCAGGCGAGCCGAGATAGCCTCCCAGAGGCTGGCGCTCATCTTC
CAGTGGAACAAGAAGTACCTCCACCTCAGCAACTACTGGTTCGCCCTCGG
CGATGACGTCATCACGGAGTACATCCAGGGCTTGCAGTTCCTTCCCGTGT
GCATCATGTATCTCCAGCTGTGCCCTGACGGCAGCGAGGGCGCGACGTAC
TCGATGCTGACGACGATGGGCAACATCGCCCTCGTCTGCGCCAGCAGTAT
CGGCACAGTGTTGAGCAAGGTGCGTCTCTGGTTGTTTATAGACCAGTTTC
GGAGTTGA
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