mRNA_P-wetherbeei_contig6066.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6066.1.2
Unique NamemRNA_P-wetherbeei_contig6066.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: D7FLF9_ECTSI (Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF9_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 3.880e-43
Identity = 164/419 (39.14%), Postives = 211/419 (50.36%), Query Frame = 1
Query:    7 GVVYGTATEDMDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQLAAAAMAKAKQAKAIKAKQATKIAAAKVEDGDGGGKADGXXXXXXXXXXXXXXXXXXXXXXXXXXALEAAAPADGAEAVKMEEXXXXXXXXXXXXXGETGKAGDDAIAVDEEATRAPRVATVLEETAAPKGEAAAAVPAAEIATDMKAEPEKEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVELIPMYQEARRIFLEPEVYAPSSFDLKWTDPDEEGLTEFLVTKMGFNADRVASGIKRLKDARKLTGQRRMDSFFKPVEAPGGSSSGAKRKPVLEPKGKSKGPA 1263
            GVVYGTATEDMDALTFQTPKLLR+   S +   +++V           LLQGL ++ E+FVD+C+LCGCDYT S++GIGPKKAL  ++Q+G+IE+++KHLD  KYPVP+ W            +  A++A+  K                             XXXXXXXXXXXXXXXXXXXX  E A P    EAV  E+                 K GD     D +  +A       +   +   EAA      E  T+  AE E+E                                             +  PMY++AR +FL+PEV     + LKWTDPDE GL +FLV + GFNA+RVASGI +LK ARK   Q+RMDSFF  +  P   ++GAK KP  + K  +KG A
Sbjct:  174 GVVYGTATEDMDALTFQTPKLLRRMTFSGSNQPILEVDYQ-------KLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDAKKYPVPDDW------------LEPAERAERRK-----------------------------XXXXXXXXXXXXXXXXXXXXXAETANP----EAVSEEDVQQ--------------KEGDS----DSDKAKAD----TPDHGVSVAKEAADVSAKRERETEDAAESEQEMD-------------------------------------------DTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFFSVIPNP---NAGAK-KPAPKAKAGAKGKA 471          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: A0A835Z748_9STRA (Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z748_9STRA)

HSP 1 Score: 164 bits (416), Expect = 4.640e-41
Identity = 168/414 (40.58%), Postives = 209/414 (50.48%), Query Frame = 1
Query:    7 GVVYGTATEDMDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQLAAAAMAKAKQAKAIKAKQATKIAAAKVEDGDGGGKADGXXXXXXXXXXXXXXXXXXXXXXXXXXALEAAAPADGAEAVKMEEXXXXXXXXXXXXXGETGKAGDDAIAVDEEATRAPRVATVLEETAAPKGEAAAAVPAAEIATDMKAEPEKEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVELIPMYQEARRIFLEPEVYAPSSFDLKWTDPDEEGLTEFLVTKMGFNADRVASGIKRLKDARKLTGQRRMDSFFKPVEAPGGSSSGAKRKPVLEPKGK 1248
            GVV+GT TEDMDALTF+TPKL+R+   +           P+  +    +L+GLG+T E+FVD+CILCGCDYTDS+RGIGPKKAL  IK++ SIE++LKHLD+ K+ +P  W                     I  +  T +A           K   XXXXXXXXXXXXXXXXXXXXXXXXXX                  XXXXXXXXXXX                      P  A V++E          AVPA                                                           + IPMY+EARR+FLEP+V+  +++DLKWTDP+ E LT FLV KM FNA+RVA+GIK+LK+ARK  GQ RMD+FFK    P G+  G KR   ++  GK
Sbjct:  175 GVVFGTGTEDMDALTFRTPKLIRRLTTNKNQ--------PIMEVDYAGVLEGLGLTHEEFVDMCILCGCDYTDSIRGIGPKKALMLIKKHHSIEEILKHLDRSKHGIPADW---------------------IPGETPTPLA-----------KPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------PPAAPVVQE----------AVPA-----------------------------------------------------------DKIPMYKEARRLFLEPDVFPANTYDLKWTDPNVEELTTFLVEKMQFNAERVAAGIKKLKEARKKGGQTRMDTFFKSTAPPPGTKVGVKRPAEVKKGGK 457          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: A0A7S2SD31_9STRA (Flap endonuclease 1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD31_9STRA)

HSP 1 Score: 152 bits (385), Expect = 9.080e-37
Identity = 148/431 (34.34%), Postives = 191/431 (44.32%), Query Frame = 1
Query:    1 QAGVVYGTATEDMDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQLAAAAMAKAKQAKAIKAKQATKIAAAKVEDGDGGGKADGXXXXXXXXXXXXXXXXXXXXXXXXXXALEAAAPADGAEAVKMEEXXXXXXXXXXXXXGETGKAGDDAIAVDEEATRAPRVATVLEETAAPKGEAAAAVPAAEIATDMKAEPEKEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVELIPMYQEARRIFLEPEVYAPSSFDLKWTDPDEEGLTEFLVTKMGFNADRVASGIKRLKDARKLTGQRRMDSFFKPVEAPGGSSSGAKRKPVLEPKGKSKGPATKKGKTTGGK 1293
            +AG+V+ TATEDMDALTFQTP LL++   S       K   P+ ++    LL GLGITQEQFVD+CILCGCDY D   GIGPK AL  +++YG++E ++K+LDK K+P+P  W+  + K                                                                        PAD A A     XXXXXXXXXXXX       G   +  +E  T A       E  A P+       PAA   T    EPEKE+                                               P++ E R++F  P V  P +  LKWT+PDEEGL +FLV + GFNA+RV+SGIK+LK+ +    Q+RMDSFFK      G  S +KRK        +K   +KKGK + GK
Sbjct:  195 KAGLVWATATEDMDALTFQTPHLLKRMTFSA------KQQAPIMQISHDKLLHGLGITQEQFVDLCILCGCDYCDRPSGIGPKTALKLVRKYGNLENIVKNLDKKKHPLPVGWERPAPK------------------------------------------------------------------------PADPAPAAXXXXXXXXXXXXXXXX-----SEGGSEVTHEENETDAQ------EPDAKPE-------PAASAETAQ--EPEKEQPWE--------------------------------------------PLFVEVRQLFHTPLVQDPVNCSLKWTEPDEEGLIKFLVEEKGFNAERVSSGIKKLKEMKGKGTQQRMDSFFKST----GMVSSSKRKAAP-----AKAKPSKKGKISKGK 474          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: W7U4Z8_9STRA (Flap endonuclease 1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4Z8_9STRA)

HSP 1 Score: 141 bits (356), Expect = 6.960e-33
Identity = 127/402 (31.59%), Postives = 171/402 (42.54%), Query Frame = 1
Query:    7 GVVYGTATEDMDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQLAAAAMAKAKQAKAIKAKQATKIAAAKVEDGDGGGKADGXXXXXXXXXXXXXXXXXXXXXXXXXXALEAAAPADGAEAVKMEEXXXXXXXXXXXXXGETGKAGDDAIAVDEEATRAPRVATVLEETAAPKGEAAAAVPAAEIATDMKAEPEKE-EGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVELIPMYQEARRIFLEPEVYAPSSFDLKWTDPDEEGLTEFLVTKMGFNADRVASGIKRLKDARKLTGQRRMDSFFKPVEAPGGSSS 1209
            G VY  ATED D LTF TP+LLR  M S     + ++           +L+GLG+T  QF+D+CIL GCDYT ++RGIGPK AL  IK+YG IE +L+++ KGKY VP  W            + + K  K      +   + + VE+GD                                     A P D   A K  E                 KAG +    ++E                 +G  AAA+ A E+A D   EP K  EG                                         EV  +P Y  AR +F++PE++ P+  + KW +P+E GL  FL+  +GFN DRV SGI +LK +R    Q+R+DSFFKP     GSSS
Sbjct:  175 GKVYAVATEDTDTLTFATPRLLRN-MTSAGDNPIKEIDYK-------KMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEW------------LPRIKVRKPSSLPPSAPPSVSPVEEGD------------------------------------KAMPGD-ENACKTAEVDS--------------KAGMEG---EKE-----------------EGIKAAAIVAREVAPD---EPAKSVEG-----------------------------------------EVMEMPAYVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLGFNPDRVKSGIAKLKASRGAMQQKRLDSFFKPS----GSSS 437          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: A0A451ESR9_9CUCU (Flap endonuclease 1 (Fragment) n=1 Tax=Afromicracis pennata TaxID=2713339 RepID=A0A451ESR9_9CUCU)

HSP 1 Score: 121 bits (303), Expect = 7.620e-29
Identity = 62/121 (51.24%), Postives = 84/121 (69.42%), Query Frame = 1
Query:    1 QAGVVYGTATEDMDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQL 363
            +AG ++GTATEDMDALTF +  +LR    S A        +P+  +    +LQ L +TQ +F+D+CIL GCDYTDS+RGIGPKK++  IK + +IE +LKHLDK KYP PE+W+ E  +QL
Sbjct:    2 KAGKIFGTATEDMDALTFGSNIVLRHLTFSEARK------MPIQEIHLKTVLQELNLTQNEFIDLCILMGCDYTDSIRGIGPKKSIELIKNHRNIETILKHLDKDKYPPPENWNFEGARQL 116          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: A0A1C8V7E6_9CUCU (Flap endonuclease 1 (Fragment) n=1 Tax=Triozastus marshalli TaxID=1689898 RepID=A0A1C8V7E6_9CUCU)

HSP 1 Score: 121 bits (303), Expect = 8.830e-29
Identity = 61/121 (50.41%), Postives = 86/121 (71.07%), Query Frame = 1
Query:    1 QAGVVYGTATEDMDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQL 363
            + G VY TATEDMDALTF +  +LR    S A        +P+  +    +L+GL ++ +QFVD+CIL GCDYTDS++GIGPKK++  IK++ SIE++LKHLDK KYP PE+W+ E+ ++L
Sbjct:    7 KGGKVYATATEDMDALTFGSNVVLRHMTYSEARK------MPIHEIHLSKVLEGLQLSHQQFVDLCILMGCDYTDSIKGIGPKKSIELIKKHSSIEEILKHLDKEKYPPPENWNYENARKL 121          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: A0A3Q9JQH2_9CUCU (Flap endonuclease 1 (Fragment) n=1 Tax=Curculionidae gen. sp. CoMim02 TaxID=2174889 RepID=A0A3Q9JQH2_9CUCU)

HSP 1 Score: 120 bits (300), Expect = 1.760e-28
Identity = 61/121 (50.41%), Postives = 84/121 (69.42%), Query Frame = 1
Query:    1 QAGVVYGTATEDMDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQL 363
            +AG ++ TATEDMDALTF +  LLR    S A        +P+  +    +LQ L +TQ++F+D+CIL GCDYTDS+RGIGPKK++ +IK+Y SIE++LKH+DK KYP PE W+    + L
Sbjct:    3 RAGKIFATATEDMDALTFGSDVLLRHLTFSEARK------MPIQEIHLKIVLQELDLTQKEFIDLCILMGCDYTDSIRGIGPKKSIEYIKKYKSIEEILKHIDKXKYPPPEDWNFAGARAL 117          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: A0A3S9XJU6_9CUCU (Flap endonuclease 1 (Fragment) n=1 Tax=Phloeotribus scarabaeoides TaxID=479299 RepID=A0A3S9XJU6_9CUCU)

HSP 1 Score: 119 bits (298), Expect = 3.760e-28
Identity = 61/121 (50.41%), Postives = 82/121 (67.77%), Query Frame = 1
Query:    1 QAGVVYGTATEDMDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQL 363
            +AG +Y TATEDMDALTF +  LLR    S A        +P+  +    +LQ LG+ Q++F+D+CIL GCDYT S+RGIGPKKA++ I+ + SIE +L H+DK KYP PE+WD    +QL
Sbjct:    2 KAGKIYATATEDMDALTFGSDILLRHLTFSEARK------MPIQEIHLKTVLQALGLNQKEFIDLCILMGCDYTGSIRGIGPKKAIDLIQSHRSIENILDHIDKDKYPPPENWDFSGARQL 116          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: A0A1C8V7D7_9CUCU (Flap endonuclease 1 (Fragment) n=1 Tax=Brentidae gen. sp. DP-2016 TaxID=1843172 RepID=A0A1C8V7D7_9CUCU)

HSP 1 Score: 117 bits (293), Expect = 2.140e-27
Identity = 61/121 (50.41%), Postives = 87/121 (71.90%), Query Frame = 1
Query:    1 QAGVVYGTATEDMDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQL 363
            +AG VY TATEDMDALTF +  +LR+  +S A        IP+  +    +L+GL I++EQFVD+CIL GCDYTDS+RGIGPKK++  I+Q+ SIE++L  +DK K+P PE+W+ +  ++L
Sbjct:    7 KAGKVYATATEDMDALTFGSNVVLRKLTLSEAKK------IPIQEIHLNKVLEGLEISKEQFVDLCILMGCDYTDSIRGIGPKKSIELIRQHKSIEEILNRIDKEKFPPPENWNYKGAREL 121          
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Match: A0A1I8FWP4_9PLAT (Flap endonuclease 1 n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8FWP4_9PLAT)

HSP 1 Score: 121 bits (304), Expect = 2.190e-27
Identity = 65/121 (53.72%), Postives = 84/121 (69.42%), Query Frame = 1
Query:    1 QAGVVYGTATEDMDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQFVDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPESWDLESLKQL 363
            ++G V+   TEDMDALTF  P LLR+   S A     K+ I  FRL     LQ + ++QEQFVD+CIL GCDY DSVRG+GPKKAL F+++YG I+ +LKHLDK KY VPE+W  +  ++L
Sbjct:   52 RSGRVFAVGTEDMDALTFGAPVLLRRLTFSEAK----KMPIQEFRLDKA--LQEMSMSQEQFVDLCILLGCDYCDSVRGVGPKKALEFLRKYGDIDNVLKHLDKDKYQVPENWQYQEARRL 166          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6066.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF9_ECTSI3.880e-4339.14Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835Z748_9STRA4.640e-4140.58Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2SD31_9STRA9.080e-3734.34Flap endonuclease 1 n=1 Tax=Rhizochromulina marina... [more]
W7U4Z8_9STRA6.960e-3331.59Flap endonuclease 1 n=2 Tax=Nannochloropsis gadita... [more]
A0A451ESR9_9CUCU7.620e-2951.24Flap endonuclease 1 (Fragment) n=1 Tax=Afromicraci... [more]
A0A1C8V7E6_9CUCU8.830e-2950.41Flap endonuclease 1 (Fragment) n=1 Tax=Triozastus ... [more]
A0A3Q9JQH2_9CUCU1.760e-2850.41Flap endonuclease 1 (Fragment) n=1 Tax=Curculionid... [more]
A0A3S9XJU6_9CUCU3.760e-2850.41Flap endonuclease 1 (Fragment) n=1 Tax=Phloeotribu... [more]
A0A1C8V7D7_9CUCU2.140e-2750.41Flap endonuclease 1 (Fragment) n=1 Tax=Brentidae g... [more]
A0A1I8FWP4_9PLAT2.190e-2753.72Flap endonuclease 1 n=2 Tax=Macrostomum lignano Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6066contigP-wetherbeei_contig6066:1..3414 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FLF9
Preferred nameFEN1
PFAMsXPG_I,XPG_N
Model size1722
Max annot lvl2759|Eukaryota
KEGG koko:K04799
KEGG Pathwayko03030,ko03410,ko03450,map03030,map03410,map03450
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000278,GO:0000287,GO:0000723,GO:0000724,GO:0000725,GO:0000726,GO:0000731,GO:0000734,GO:0000737,GO:0001302,GO:0001654,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004521,GO:0004523,GO:0004527,GO:0004529,GO:0004536,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006284,GO:0006286,GO:0006302,GO:0006303,GO:0006308,GO:0006309,GO:0006310,GO:0006312,GO:0006401,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006921,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007063,GO:0007275,GO:0007423,GO:0007530,GO:0007531,GO:0007533,GO:0007534,GO:0007568,GO:0007569,GO:0007610,GO:0007611,GO:0007613,GO:0008150,GO:0008152,GO:0008219,GO:0008297,GO:0008309,GO:0008409,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009987,GO:0010564,GO:0010638,GO:0012501,GO:0016043,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016796,GO:0016888,GO:0016891,GO:0016893,GO:0016895,GO:0017108,GO:0018130,GO:0019438,GO:0019439,GO:0019725,GO:0022402,GO:0022411,GO:0022413,GO:0022414,GO:0022616,GO:0030145,GO:0030154,GO:0030262,GO:0031974,GO:0031981,GO:0032200,GO:0032201,GO:0032501,GO:0032502,GO:0032505,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033260,GO:0033554,GO:0033567,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0034655,GO:0035312,GO:0035753,GO:0035822,GO:0035861,GO:0042592,GO:0043010,GO:0043137,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043570,GO:0043596,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0045145,GO:0045165,GO:0045787,GO:0045876,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0048256,GO:0048513,GO:0048518,GO:0048522,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051128,GO:0051130,GO:0051276,GO:0051716,GO:0051726,GO:0051908,GO:0051983,GO:0051984,GO:0060041,GO:0060249,GO:0065007,GO:0065008,GO:0070013,GO:0070914,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0071897,GO:0090068,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0090734,GO:0097159,GO:0097194,GO:0098501,GO:0098502,GO:0104004,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902969,GO:1903047,GO:1903469,GO:1904162,GO:2001252
Exons5
Evalue1.75e-37
EggNOG OGsCOG0258@1|root,KOG2519@2759|Eukaryota
Descriptionendonuclease activity
Cds size1287
COG categoryL
BRITEko00000,ko00001,ko01000,ko03032,ko03400,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6066.1.2prot_P-wetherbeei_contig6066.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6066 37..3015 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186886.4360182-UTR-P-wetherbeei_contig6066:0..361683186886.4360182-UTR-P-wetherbeei_contig6066:0..36Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6066 1..36 +
1683186886.512625-UTR-P-wetherbeei_contig6066:3015..34141683186886.512625-UTR-P-wetherbeei_contig6066:3015..3414Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6066 3016..3414 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186886.448658-CDS-P-wetherbeei_contig6066:36..691683186886.448658-CDS-P-wetherbeei_contig6066:36..69Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6066 37..69 +
1683186886.4621289-CDS-P-wetherbeei_contig6066:823..9891683186886.4621289-CDS-P-wetherbeei_contig6066:823..989Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6066 824..989 +
1683186886.4801042-CDS-P-wetherbeei_contig6066:1253..20231683186886.4801042-CDS-P-wetherbeei_contig6066:1253..2023Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6066 1254..2023 +
1683186886.4940372-CDS-P-wetherbeei_contig6066:2338..25021683186886.4940372-CDS-P-wetherbeei_contig6066:2338..2502Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6066 2339..2502 +
1683186886.5040042-CDS-P-wetherbeei_contig6066:2861..30151683186886.5040042-CDS-P-wetherbeei_contig6066:2861..3015Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6066 2862..3015 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6066.1.2

>prot_P-wetherbeei_contig6066.1.2 ID=prot_P-wetherbeei_contig6066.1.2|Name=mRNA_P-wetherbeei_contig6066.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=429bp
MDALTFQTPKLLRQEMVSLAAFDLIKVFIPLFRLLPCALLQGLGITQEQF
VDICILCGCDYTDSVRGIGPKKALNFIKQYGSIEKMLKHLDKGKYPVPES
WDLESLKQLAAAAMAKAKQAKAIKAKQATKIAAAKVEDGDGGGKADGGGG
AASGEGGAASGECGGGANASDGAALEAAAPADGAEAVKMEEAAAAAEDAK
PAAEGETGKAGDDAIAVDEEATRAPRVATVLEETAAPKGEAAAAVPAAEI
ATDMKAEPEKEEGAAAAAAATAAAPAAAAKAGAAAKEEEEEEEEEEELAA
VEEEEVELIPMYQEARRIFLEPEVYAPSSFDLKWTDPDEEGLTEFLVTKM
GFNADRVASGIKRLKDARKLTGQRRMDSFFKPVEAPGGSSSGAKRKPVLE
PKGKSKGPATKKGKTTGGKAGNKAGGKK*
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mRNA from alignment at P-wetherbeei_contig6066:1..3414+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6066.1.2 ID=mRNA_P-wetherbeei_contig6066.1.2|Name=mRNA_P-wetherbeei_contig6066.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3414bp|location=Sequence derived from alignment at P-wetherbeei_contig6066:1..3414+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGCCGGCGTAGTGTACGGCACCGCTACGGAGGACATGGACGCCCTCAC TTTCCAGACGCCCAAGCTCGTGGGCCAGTGGGAGGGGTCATCGCGGGGAG CTTTTGTTATATCTTAATTGAGATTTTTGCATGTGTTTTTCTGAAAGCAT TCGGATGCTTTCAATACATTTGTAGAAGTTATTCTATAAAAGGACTCTGC CAGGTTGGTTGGGAAAAAGTGCGGAGCGTTTCCTATTGGGGCGTTGTGCA ACAAGAGCAGGGTGTGTTTGCATGTGGCTTTGTAGATGTGGTGGCAACAT CATTCGCTGTGGGTTGGGCTGGCTTGGGATTGCCTTTATCGGAGAGAAAT AGTTTTACCTCTTATCGGTTTATCCCCAGTCTTTGTTGTTTCTTTTCCCT GTCTTCGGCCATGCGGCTCTTTCTCTCCTTCTTCCCCCCGCAGCTGCGGC GGATGGCGGCGTCGGGACAGCTCCAGCAGGCCATCCTTGAGGTGGACCAC GAAAAGCTGCTCAAGGTGATTTGACTGACTGACGGGTTGTCAATATCTTT CGCTTCAAGGCGGTGGCATGACAATCGCTTTTTTGTGTCTTTTATTGCAC TTTACTTGCCCGCAACGTGGTCTTCTCGCATGCCGCTATTTGCGAGCTTC CTCTTGCACGGTTGCTCCCACTTCTCCGTTGCATGGGGTGCATCCTGCTG AGCACGCCATGGATAGAGCAGCGTTGGTTGTCATGTGTAACTTTTCTTAA CCAGATTTTTGTTCAGTCGCGAAACTTCTCCGTGCTATTGTTGAGCTGAT CTGCTGATTTCGCTGCCGGAAAGCTGCGCCAAGAAATGGTATCTCTTGCA GCTTTTGACTTGATAAAAGTGTTCATTCCCTTGTTCCGCCTTCTTCCGTG CGCGCTGTTGCAGGGCCTGGGCATCACCCAGGAGCAGTTCGTGGACATTT GCATCCTCTGTGGCTGCGACTACACCGACAGTGTCCGCGGTGGGTGGTGT TTATCCCGTCCTGAAATGATTGCTGCTGCCTTCAAACATTAGATGAAGAC ACTGGAAAAGCTCTTTTTAGCTTGTCGGTGTGATTGTTCTGAAATGCAAT CAAGAAAGGACATCCTATAAGCGACTGCCCTCTTGGCTTCTTTGACCACG CTGTTCCTTCTCATTTACTTTAAATTTTGCACGAAAACCGTTCGCCTCGC CGCCCCACCCTCCGCTTCTCCCCGTCACCCCCGCCCCGGTCCCGCCCCAT CAGGCATCGGCCCGAAGAAGGCGCTGAACTTCATCAAACAGTACGGCAGC ATCGAGAAGATGCTCAAGCACCTCGACAAGGGCAAGTACCCTGTGCCAGA GTCGTGGGACCTCGAGTCCCTCAAGCAGCTCGCGGCCGCCGCCATGGCCA AGGCAAAGCAGGCCAAGGCCATCAAGGCCAAGCAGGCCACAAAAATCGCC GCCGCCAAGGTGGAGGACGGGGACGGCGGCGGCAAGGCCGACGGGGGGGG CGGCGCCGCCAGCGGAGAGGGCGGTGCCGCCAGCGGTGAGTGCGGTGGCG GCGCCAACGCTTCCGACGGTGCGGCTCTCGAGGCGGCGGCTCCGGCTGAC GGCGCGGAGGCAGTTAAGATGGAGGAGGCGGCGGCGGCGGCCGAGGACGC CAAGCCGGCAGCGGAGGGCGAGACGGGCAAGGCCGGGGATGACGCGATAG CCGTGGACGAGGAGGCGACCAGGGCGCCGCGCGTGGCGACTGTTTTGGAG GAGACTGCCGCCCCCAAGGGAGAAGCCGCCGCCGCCGTACCTGCAGCCGA GATCGCCACTGATATGAAGGCCGAGCCGGAGAAGGAGGAGGGCGCGGCGG CGGCGGCGGCAGCGACTGCTGCTGCCCCGGCGGCTGCGGCGAAGGCCGGA GCCGCGGCAAAAGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGAGCTCGC CGCCGTGGAGGAGGAGGAAGTGGAGCTGATTCCCATGTACCAGGAGGCCC GCCGTATCTTCCTGGAGCCCGAGGTGACAGGGCTGACACGGCGATGGATC GCTCGGCTCTTCGGCGTGCTCTTAGAAACGTCATGTTCTCGATGTTGATG TTCTTTTTATGGGCCTATGTCTCGAAAGTTACGGGTTCGCTCGGACCCTC GGGACTGCATGCATCGCCGCCCTTTTAAATTGCGAGACGCAACGTGTGTC TATTCTAGAGATGATCCCAGAGTTTCTACCCTCCTTGCTCGAAGAGCTAC CCTTTTTGAGGACCAATCATTTTCATGGGTCTGTTTTGGCTGTTTCCCGC CGTTTCGGCCGTTTCGGCCGTTTCTGCTCTGCCAACAGGTGTACGCGCCG AGCTCGTTTGACCTCAAGTGGACGGATCCGGACGAGGAGGGCCTGACGGA GTTCCTCGTCACCAAGATGGGTTTCAACGCCGACCGCGTCGCCAGCGGCA TCAAGCGTCTCAAGGACGCCCGCAAGCTCACCGGCCAGCGCCGCATGGAC AGGTAGGGCAGGGATGCGGGAGAAGTTTATTAGGAGGCCGCTGCCGTGGC TCGCTACTTAAATGGATGCGATCTCGGTGTACAATTATAGTTGGAGTGCG ACTTTGAAGTTATGAGGAAACGCCGTATTGACTGGCAGCAGTTTGCGACG GGTGGCTGCGTCGACAAATGTCCTCCCTGTCTAGGGATTCCTGTTTTCGT ATTCTGCAGCAGAGGCCCTCTTGAACGGCTTACCTTCCTGATTAATGAAG CCAGGCGAGCAATGTCTGGTTCAATGCTCCCGTACCTACTCAGTTGTCCT TCTAACTCTCCCCCCACCCGCTCGCTCTCACTGCCGGACTCAACCCGCGC GACCGACGCAGTTTCTTCAAGCCGGTGGAGGCCCCAGGCGGCTCATCCAG CGGCGCCAAACGCAAGCCAGTGCTCGAGCCCAAGGGCAAGAGCAAGGGGC CCGCCACCAAAAAGGGCAAGACCACCGGCGGCAAGGCTGGTAACAAGGCT GGCGGCAAGAAGTGAACAGGACGCATCAGCTTGAGAAGAAAGGAAATCAC CCGGCATCAGTTTTCCAAGCTGCGCATTTGGTGTTGGGCTTCGGTTGGGG TGCGGGTAGTGCTCGGGAAGTGGAGGGCCGCCCTTCGTCGGCCGCCTTGC CGCAGGGTGAAGCGAGGGGTTGTATGCGTTAGGGGCGTGTGGGAGGAGAG GATGATGCATGTTTCAATCAAGACGGGGTTGGTTGCGGCCGCCTCTACAT GTCTGCGGAGCATTATCTCTGGTGCTAGCAAATCTGCTGTGCTTCGGCTG TCGCTTCCGCGTGGACGCGAAGCCGACGGCTAGGTAGCGATGTGATATCG GAAGAGACGACCTAACTAACGAGGAAAAAATGAGAAAAAGAAGAACTTAG AAATGATACTCCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6066:1..3414+

>mRNA_P-wetherbeei_contig6066.1.2 ID=mRNA_P-wetherbeei_contig6066.1.2|Name=mRNA_P-wetherbeei_contig6066.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1287bp|location=Sequence derived from alignment at P-wetherbeei_contig6066:1..3414+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACGCCCTCACTTTCCAGACGCCCAAGCTCCTGCGCCAAGAAATGGT
ATCTCTTGCAGCTTTTGACTTGATAAAAGTGTTCATTCCCTTGTTCCGCC
TTCTTCCGTGCGCGCTGTTGCAGGGCCTGGGCATCACCCAGGAGCAGTTC
GTGGACATTTGCATCCTCTGTGGCTGCGACTACACCGACAGTGTCCGCGG
CATCGGCCCGAAGAAGGCGCTGAACTTCATCAAACAGTACGGCAGCATCG
AGAAGATGCTCAAGCACCTCGACAAGGGCAAGTACCCTGTGCCAGAGTCG
TGGGACCTCGAGTCCCTCAAGCAGCTCGCGGCCGCCGCCATGGCCAAGGC
AAAGCAGGCCAAGGCCATCAAGGCCAAGCAGGCCACAAAAATCGCCGCCG
CCAAGGTGGAGGACGGGGACGGCGGCGGCAAGGCCGACGGGGGGGGCGGC
GCCGCCAGCGGAGAGGGCGGTGCCGCCAGCGGTGAGTGCGGTGGCGGCGC
CAACGCTTCCGACGGTGCGGCTCTCGAGGCGGCGGCTCCGGCTGACGGCG
CGGAGGCAGTTAAGATGGAGGAGGCGGCGGCGGCGGCCGAGGACGCCAAG
CCGGCAGCGGAGGGCGAGACGGGCAAGGCCGGGGATGACGCGATAGCCGT
GGACGAGGAGGCGACCAGGGCGCCGCGCGTGGCGACTGTTTTGGAGGAGA
CTGCCGCCCCCAAGGGAGAAGCCGCCGCCGCCGTACCTGCAGCCGAGATC
GCCACTGATATGAAGGCCGAGCCGGAGAAGGAGGAGGGCGCGGCGGCGGC
GGCGGCAGCGACTGCTGCTGCCCCGGCGGCTGCGGCGAAGGCCGGAGCCG
CGGCAAAAGAGGAGGAAGAAGAGGAGGAGGAAGAGGAGGAGCTCGCCGCC
GTGGAGGAGGAGGAAGTGGAGCTGATTCCCATGTACCAGGAGGCCCGCCG
TATCTTCCTGGAGCCCGAGGTGTACGCGCCGAGCTCGTTTGACCTCAAGT
GGACGGATCCGGACGAGGAGGGCCTGACGGAGTTCCTCGTCACCAAGATG
GGTTTCAACGCCGACCGCGTCGCCAGCGGCATCAAGCGTCTCAAGGACGC
CCGCAAGCTCACCGGCCAGCGCCGCATGGACAGTTTCTTCAAGCCGGTGG
AGGCCCCAGGCGGCTCATCCAGCGGCGCCAAACGCAAGCCAGTGCTCGAG
CCCAAGGGCAAGAGCAAGGGGCCCGCCACCAAAAAGGGCAAGACCACCGG
CGGCAAGGCTGGTAACAAGGCTGGCGGCAAGAAGTGA
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