mRNA_P-wetherbeei_contig603.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig603.1.1 vs. uniprot
Match: A0A6H5KBP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP1_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 5.560e-13 Identity = 53/148 (35.81%), Postives = 75/148 (50.68%), Query Frame = 2
Query: 29 RRLAWQYIRDVAVHERQFKTDYRLSPVHFDHLVQILRPSLELNAKMGDLRG---GFVKPENQLMITLRYLAGGRYQDIKNHHGIAKTTFYDDIVWRVIDAINSADVLRLPGLPVGEEDCARAAAGFQRRSRASLAFRGCVSAVVRCLF 463
+RL W ++ YR+ F LV++LRPSLE+NA G LR G + E ++ LR LAGG Y D+ G+++ +D I+W+VIDAIN + P+ EE C R A F+ +S + V A V CLF
Sbjct: 110 KRLPWAQHEADLDKRHGWRRSYRMEKGSFHKLVELLRPSLEVNAFFGALRSPTNGAIAVEVRVAAALRILAGGSYWDVALMFGLSRAVTFD-ILWQVIDAINETPAIGAFDFPLTEEGCMRNANRFKEKSTDGIF--SWVVAAVDCLF 254
BLAST of mRNA_P-wetherbeei_contig603.1.1 vs. uniprot
Match: A0A6H5KUP3_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUP3_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 4.110e-12 Identity = 49/131 (37.40%), Postives = 72/131 (54.96%), Query Frame = 2
Query: 29 RRLAW-QYIRDVAVHERQFKTDYRLSPVHFDHLVQILRPSLELNAKMGDLRG---GFVKPENQLMITLRYLAGGRYQDIKNHHGIAKTTFYDDIVWRVIDAINSADVLRLPGLPVGEEDCARAAAGFQRRS 409
+RL W Q+ D+ + + + YR+ F LV++LRPSL +NA G LR G + E ++ + LR LAG RY D+ G++ T Y I+W VIDAIN + P+ EE C R A F+++S
Sbjct: 23 KRLPWAQHEADLDKRQGR-RRSYRMEKASFHKLVELLRPSLAVNAFFGALRSPINGAIAVEVRVAVALRILAGARYWDVALMFGLSVPTTYQ-ILWSVIDAINKTPAVGAFDFPLTEEGCMRNANRFKKKS 151
BLAST of mRNA_P-wetherbeei_contig603.1.1 vs. uniprot
Match: A0A6H5JT08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT08_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 1.410e-10 Identity = 48/131 (36.64%), Postives = 70/131 (53.44%), Query Frame = 2
Query: 29 RRLAWQYIRDVAVHERQ-FKTDYRLSPVHFDHLVQILRPSLELNAKMGDLRG---GFVKPENQLMITLRYLAGGRYQDIKNHHGIAKTTFYDDIVWRVIDAINSADVLRLPGLPVGEEDCARAAAGFQRRS 409
+RL W + + +RQ ++ YR+ F LV++LRPSL +NA G LR G + E ++ + LR LAG Y D+ G++ T Y I+W VIDAIN + P+ EE C R A F+ +S
Sbjct: 249 KRLPWAQ-HEADLDKRQGWRRSYRMVKASFHRLVELLRPSLAVNAFFGALRSPINGAIAVEVRVAVALRILAGASYWDVALMFGLSVPTTYQ-ILWSVIDAINKTPAVGAFDFPLTEEGCMRNANRFKEKS 377
BLAST of mRNA_P-wetherbeei_contig603.1.1 vs. uniprot
Match: A0A6H5K347_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K347_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 2.260e-10 Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = 2
Query: 113 FDHLVQILRPSLELNAKMGDLRG---GFVKPENQLMITLRYLAGGRYQDIKNHHGIAKTTFYDDIVWRVIDAINSADVLRLPGLPVGEEDCARAAAGFQ 400
FD LV++LRPSL +NA G LR G + E ++ + LR LAG Y D+ G++ T Y I+W VIDAIN + P+ EE C R A F+
Sbjct: 6 FDKLVELLRPSLAVNAFFGALRSPINGAIAVEVRVAVALRILAGASYWDVALMFGLSVPTTYQ-ILWSVIDAINKTPAVGAFDFPLTEEGCMRNANRFK 103
BLAST of mRNA_P-wetherbeei_contig603.1.1 vs. uniprot
Match: A0A6H5JMK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK6_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 2.290e-9 Identity = 41/102 (40.20%), Postives = 57/102 (55.88%), Query Frame = 2
Query: 113 FDHLVQILRPSLELNAKMGDLRG---GFVKPENQLMITLRYLAGGRYQDIKNHHGIAKTTFYDDIVWRVIDAINSADVLRLPGLPVGEEDCARAAAGFQRRS 409
F LV++LRPSLE+NA G LR G + E ++ + LR LAG Y D+ G++ Y I+W VIDAIN+ + P+ EE C R A F+ +S
Sbjct: 6 FHKLVELLRPSLEVNAFFGALRSPRNGAIAVEVRVAVALRILAGASYWDVTLMFGLSVPVTYQ-ILWEVIDAINNTPAVGACDPPLTEEGCMRNANRFKEKS 106
BLAST of mRNA_P-wetherbeei_contig603.1.1 vs. uniprot
Match: A0A6H5JEM6_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM6_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 2.820e-9 Identity = 41/102 (40.20%), Postives = 57/102 (55.88%), Query Frame = 2
Query: 113 FDHLVQILRPSLELNAKMGDLRG---GFVKPENQLMITLRYLAGGRYQDIKNHHGIAKTTFYDDIVWRVIDAINSADVLRLPGLPVGEEDCARAAAGFQRRS 409
F LV++LRPSLE+NA G LR G + E ++ + LR LAG Y D+ G++ Y I+W VIDAIN+ + P+ EE C R A F+ +S
Sbjct: 6 FHKLVELLRPSLEVNAFFGALRSPRNGAISVEVRVAVALRILAGASYWDVLVMFGLSVAVTYQ-ILWEVIDAINNTPAVGAFDFPLTEEGCMRNANRFKDKS 106
BLAST of mRNA_P-wetherbeei_contig603.1.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 6.040e-8 Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 2
Query: 122 LVQILRPSLELNAKMGDLRGGFVKPENQLMITLRYLAGGRYQDIKNHHGIAKTTFYDDIVWRVIDAINSADVLRLPGLPVGEEDCARAAAGFQRRSRASLAFRGCVSA 445
LV LRP+L+ N +MG LR G + E+Q+ +TLR+LAGG + + H IA++T Y + VI+A+N+ L P GE D ARAA F+ RS + R CV A
Sbjct: 73 LVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYH-VTSTVINALNACPELNCKW-PEGE-DAARAAELFRNRSSMDVV-RKCVGA 176
BLAST of mRNA_P-wetherbeei_contig603.1.1 vs. uniprot
Match: A0A6H5KJ06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ06_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 1.940e-7 Identity = 38/103 (36.89%), Postives = 54/103 (52.43%), Query Frame = 2
Query: 29 RRLAWQYIRDVAVHERQFKTDYRLSPVHFDHLVQILRPSLELNAKMGDLRG---GFVKPENQLMITLRYLAGGRYQDIKNHHGIAKTTFYDDIVWRVIDAINS 328
+RL W R ++ YR+ F LV++LRPSLE+NA G LR + E ++ + LR LAG Y D+ G++ Y I+W VIDAIN+
Sbjct: 75 KRLPWAQHEADLDKRRGWRRSYRVEEGSFHKLVELLRPSLEVNAFFGALRSPRNDAIAVEVRVAVALRILAGASYWDVLLMFGLSVAVTYQ-ILWEVIDAINN 176
BLAST of mRNA_P-wetherbeei_contig603.1.1 vs. uniprot
Match: A0A6H5JLV6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLV6_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 3.440e-7 Identity = 43/130 (33.08%), Postives = 62/130 (47.69%), Query Frame = 2
Query: 29 RRLAWQYIRDVAVHERQFKTDYRLSPVHFDHLVQILRPSLELNAKMGDLRG---GFVKPENQLMITLRYLAGGRYQDIKNHHGIAKTTFYDDIVWRVIDAINSADVLRLPGLPVGEEDCARAAAGFQRRS 409
+RL W ++ YR+ F LV++LRPSL++NA G LR G + E ++ + LR L +DI G++ Y I+W VIDAIN+ + P+ EE C R A F S
Sbjct: 45 KRLPWAQHEADLDQRHGWRRSYRMEKGSFHKLVELLRPSLDVNAFFGALRSPRNGAIAVEVRVAVALRILDRASCRDITLMFGLSVPVTYQ-ILWEVIDAINNTPAVGAFDFPLTEEGCMRNAFRFMDTS 173
BLAST of mRNA_P-wetherbeei_contig603.1.1 vs. uniprot
Match: A0A6H5JZ30_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ30_9PHAE) HSP 1 Score: 59.3 bits (142), Expect = 4.450e-7 Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = 2
Query: 113 FDHLVQILRPSLELNAKMGDLRG---GFVKPENQLMITLRYLAGGRYQDIKNHHGIAKTTFYDDIVWRVIDAINSADVLRLPGLPVGEEDCARAAAGFQRRS 409
F LV++LRPSL +NA G LR G + E ++ + LR LAG Y D+ G++ T + I+ VID+IN + P+ EE C R A F+++S
Sbjct: 6 FHKLVELLRPSLAVNAFFGVLRSAINGAIAEEVRVAVALRILAGASYWDVALMFGLSVPTTFQ-ILRSVIDSINKTPAVGAFDFPLTEEGCMRNANRFKKKS 106 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig603.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig603.1.1 >prot_P-wetherbeei_contig603.1.1 ID=prot_P-wetherbeei_contig603.1.1|Name=mRNA_P-wetherbeei_contig603.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp MGDLRGGFVKPENQLMITLRYLAGGRYQDIKNHHGIAKTTFYDDIVWRVIback to top mRNA from alignment at P-wetherbeei_contig603:4584..5575+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig603.1.1 ID=mRNA_P-wetherbeei_contig603.1.1|Name=mRNA_P-wetherbeei_contig603.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=992bp|location=Sequence derived from alignment at P-wetherbeei_contig603:4584..5575+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig603:4584..5575+ >mRNA_P-wetherbeei_contig603.1.1 ID=mRNA_P-wetherbeei_contig603.1.1|Name=mRNA_P-wetherbeei_contig603.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig603:4584..5575+ (Phaeothamnion wetherbeei SAG_119_79)back to top |