mRNA_P-wetherbeei_contig5942.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5942.2.1 vs. uniprot
Match: A0A835ZF18_9STRA (5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF18_9STRA) HSP 1 Score: 217 bits (552), Expect = 1.520e-66 Identity = 107/200 (53.50%), Postives = 137/200 (68.50%), Query Frame = 2
Query: 218 KAGLRKEVKTRLKVLEADDIARASASIAQRLSDVPGIADAEAVSVYLAMAKEAQTNLILADLFARGKKVYIPRIMGPDPADMRMFPLASLAEIESFPSTKWGIPEPSAELVLSREDGVVAGDIDVVVAPGCAFDAACNRLGHGKGYYDCFLRRAEEVRRVLGRPRAAVVGIGLDEQLLEAVPTSAHDVSLDAVVTPTRTF 817
KA LR +KT L LE IA +S +I L +P + + VS YL+M +EAQT I+ LF GK+VY+P+++GPDP+DMRM+ + S+ +IESFP TKW IPEPS E VL+ EDG GDID+V+ PGCAFDA CNRLGHGKGYYD FL+R + G P VGI L+EQ++ +VP + HDV LD VVTP + F
Sbjct: 14 KAALRSAIKTALGKLEKPAIAASSEAILGHLKTLPCWSKSSVVSAYLSMPREAQTMPIMDALFTAGKRVYVPKVVGPDPSDMRMYQIESMGQIESFPLTKWNIPEPSLEAVLAAEDGTTTGDIDLVILPGCAFDARCNRLGHGKGYYDSFLKRCFAAAKARGNPIPVTVGICLEEQVVPSVPVTDHDVPLDFVVTPEQVF 213
BLAST of mRNA_P-wetherbeei_contig5942.2.1 vs. uniprot
Match: D7FQL2_ECTSI (5-formyltetrahydrofolate cyclo-ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQL2_ECTSI) HSP 1 Score: 213 bits (543), Expect = 1.110e-64 Identity = 108/212 (50.94%), Postives = 139/212 (65.57%), Query Frame = 2
Query: 206 VRATKAGLRKEVKTRLKVLEADDIARASASIAQRLSDVPGIADAE------AVSVYLAMAKEAQTNLILADLFARGKKVYIPRIMGPDPADMRMFPLASLAEIESFPSTKWGIPEPSAELVLSREDGVVAGDIDVVVAPGCAFDAACNRLGHGKGYYDCFLRRAEEVRRVLGRPRAAVVGIGLDEQLLEAVPTSAHDVSLDAVVTPTRTFWR 823
VR K LRK +K+ LK + + + ASA++A+RL P + E AVSVYL+M KE T+ I++ LF RGKKVYIP+++G ADMRMFP+ S E+ SFP TKW I EPS ELV SREDGV GDI V++ P A D CNRLGHG+G+YDCF R + GRP +G+ DEQ+++ +PT + DV LD V+TPTRTF R
Sbjct: 32 VREQKKALRKRIKSELKQMSDEAVGVASAAVAERLLSFPQLQQQEGGDGGGAVSVYLSMPKELGTSAIVSGLFKRGKKVYIPKVLGAASADMRMFPVRSEEEVASFPLTKWKISEPSEELVFSREDGVTEGDISVIIVPAVALDPTCNRLGHGRGHYDCFFERVNKASMDKGRPPPVTIGVCFDEQVVDCIPTESTDVRLDFVLTPTRTFRR 243
BLAST of mRNA_P-wetherbeei_contig5942.2.1 vs. uniprot
Match: A0A7S3LPS7_9STRA (5-formyltetrahydrofolate cyclo-ligase n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LPS7_9STRA) HSP 1 Score: 179 bits (455), Expect = 5.740e-52 Identity = 94/205 (45.85%), Postives = 130/205 (63.41%), Query Frame = 2
Query: 209 RATKAGLRKEVKTRLKVLEADDIARASASIAQRLSDVPGIADAEAVSVYLAMAKEAQTNLILADLFARGKKVYIPRIMGPDPADMRMFPLASLAEIESFPSTKWGIPEPSAELVLSREDGVVAGDIDVVVAPGCAFDAACNRLGHGKGYYDCFLRRAEEVRRVLGRPRAAVVGIGLDEQLLEAVPTSAHDVSLDAVVTPTRTFWR 823
+A K +RK + L A+ IA S +AQ S + + ++ VS+YL+M KE QT+ +L LF K+V+IP++ G DM M L SL EI+ TKWGIPE + + +R DG+ G+ID V+APG F+ C RLGHG GYYDCFL R +E R+ LG P A V+GI L+EQ+L+ +P S +DV+LD V+TPT+ F R
Sbjct: 9 KAMKKAVRKSTSKIVSALSAEAIAEQSTRLAQHASGLKVLQASKNVSLYLSMKKELQTDSLLKWLFDNNKRVFIPKVTGKASQDMIMPELRSLEEIKLMKETKWGIPEFTESQLENRSDGIETGEIDFVLAPGVGFNHQCLRLGHGGGYYDCFLTRLQEKRKTLGLPPAFVLGIALEEQILDHIPVSEYDVTLDGVLTPTKLFLR 213
BLAST of mRNA_P-wetherbeei_contig5942.2.1 vs. uniprot
Match: W4FG50_9STRA (5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FG50_9STRA) HSP 1 Score: 176 bits (446), Expect = 1.400e-50 Identity = 92/209 (44.02%), Postives = 130/209 (62.20%), Query Frame = 2
Query: 206 VRATKAGLRKEVKTRLKVLEADDIARASASIAQRLSDVPGIADAEAVSVYLAMAKEAQTNLILADLFARGKKVYIPRIMGPDPADMRMFPLASLAEIESFPSTKWGIPEPSAELV--LSREDGVVAGDIDVVVAPGCAFDAACNRLGHGKGYYDCFLRR-AEEVRRVLGRPRAAVVGIGLDEQLLEAVPTSAHDVSLDAVVTPTRTFWR 823
V+A K +RK++ +L+ AD++A ASA + L P A++V YL M EA T I+ ++FA+GKK+Y+P++ GP DM M + S +I++FP +KW IPEP + L RE+ + D+D+++ PG AFDA CNRLGHGKGYYDCF R A + R L +GI L EQ+++ VPTSAHD +LD +VTP R
Sbjct: 14 VKALKQVIRKDIDLKLRQYSADEVASASAQLTSHLVQHPAFVQAKSVCAYLPMPNEASTAAIIHEIFAQGKKLYVPKVTGPRSEDMVMLHVTSQRDIDTFPKSKWNIPEPLLDHPNGLPRENALDVTDLDLILVPGVAFDAHCNRLGHGKGYYDCFFERYASKCRGAL----PPTLGIALPEQVIDQVPTSAHDKALDGLVTPRGVLSR 218
BLAST of mRNA_P-wetherbeei_contig5942.2.1 vs. uniprot
Match: A0A2R5GGK1_9STRA (5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGK1_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.600e-50 Identity = 96/207 (46.38%), Postives = 126/207 (60.87%), Query Frame = 2
Query: 218 KAGLRKEVKTRLKVLEADDIARASASIAQRLSDVPGIADAEAVSVYLAMAKEAQTNLILADLFARGKKVYIPRIMGPDPADMRMFPLASLAEIESFPSTKWGIPEPSAELVLSREDGV---VAGDIDVVVAPGCAFDAACNRLGHGKGYYDCFLRRAEEVRRVLGRPRAAVVGIGLDEQLLEAVPTSAHDVSLDAVVTPTRTFWRGG 829
K LR+E+ T LK + D + AS +A+ + ++P AE VS+YLAM EAQT L LF K+V++P+I+G DMRM LASL E+ KWGIPE + E + R DGV V +DVV PG AF RLGHGKGYYD FL++ + R+ G P A VG+ LDEQ+L+AVP HDV+LDAV TP+ ++ G
Sbjct: 3 KKTLRREIATVLKNMGEDKMHAASKQLAEHIKEIPRAQTAERVSIYLAMKNEAQTQTALEWLFDAKKRVFVPKIIGAGSEDMRMPELASLEELAGLDKFKWGIPEFTLEQLEERADGVDSSVEDLVDVVFTPGVAFTTDGFRLGHGKGYYDAFLKKLQRARKAAGLPPAYTVGLSLDEQILDAVPVEDHDVALDAVATPSAVYYCAG 209
BLAST of mRNA_P-wetherbeei_contig5942.2.1 vs. uniprot
Match: A0A0G4F0S7_VITBC (5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F0S7_VITBC) HSP 1 Score: 176 bits (447), Expect = 2.350e-50 Identity = 97/224 (43.30%), Postives = 137/224 (61.16%), Query Frame = 2
Query: 155 SSNSNSGVLMASDPDALVRATKAGLRKEVKTRLKVLEADDIARASASIAQRLSDVPGIADAEAVSVYLAMAK-EAQTNLILADLFARGKKVYIPRIMGPDPADMRMFPLASLAEIESFPSTKWGIPEPSAELVLSREDGVVAGDIDVVVAPGCAFDAACNRLGHGKGYYDCFLRRAEEVRRVLGRPRAAVVGIGLDEQLLE--AVPTSAHDVSLDAVVTPTRTF 817
+S S S V + + + K LR++V+ +LK L + I SA++ +LS P ++ V VYL+M E T+ ++ + F +GK+V++PR++G +P DMRM ++S+ EI SFP + WGIPE S + L REDG GDID+V+ PG AFD + RLGHGKGYYDCFL R + GRPR +GIGL EQLL +P + D+ LD VVTP +
Sbjct: 12 ASVSTSDVQPGATSVSAISEQKKALRRQVRGQLKSLSHESIEPQSAAVFAQLSQHPTFVRSQCVCVYLSMPSGEIDTHTLVREAFRQGKRVFVPRVVGKNPPDMRMVEVSSVDEISSFPMSPWGIPELSLDETLRREDGTYCGDIDLVICPGVAFDQSGRRLGHGKGYYDCFLARLFASLKDRGRPRTTTIGIGLREQLLPLATIPMDSLDMFLDWVVTPDGVY 235
BLAST of mRNA_P-wetherbeei_contig5942.2.1 vs. uniprot
Match: A0A8K1CD56_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD56_PYTOL) HSP 1 Score: 173 bits (439), Expect = 1.430e-49 Identity = 94/204 (46.08%), Postives = 122/204 (59.80%), Query Frame = 2
Query: 212 ATKAGLRKEVKTRLKVLEADDIARASASIAQRLSDVPGIADAEAVSVYLAMAKEAQTNLILADLFARGKKVYIPRIMGPDPADMRMFPLASLAEIESFPSTKWGIPEPSAELVLS--REDGVVAGDIDVVVAPGCAFDAACNRLGHGKGYYDCFLRRAEEVRRVLGRPRAAVVGIGLDEQLLEAVPTSAHDVSLDAVVTPTRTF 817
A K LRK + L+ +E +I R S +IAQR++ +P A A+SVYL M KEA T IL FA KKVY+P+I+G D++M +SL +I++FP KW IP+P E R D + + D+D+V+ PG AFD + RLGHGKGYYD FLRR E RP VGI L QL++AVP S HD LD +VTP
Sbjct: 9 AIKKALRKSIAASLRAIEDQEITRQSDAIAQRIAALPEFQQAMALSVYLHMPKEAATRNILTHSFAEKKKVYVPKIVGKGAEDLKMVHASSLEDIDAFPKDKWQIPDPPLENSAGEPRNDAITSRDLDLVLLPGVAFDRSGGRLGHGKGYYDSFLRRLTEAYDEHNRPLPVTVGICLSSQLVDAVPLSPHDRMLDVIVTPEEVI 212
BLAST of mRNA_P-wetherbeei_contig5942.2.1 vs. uniprot
Match: A0A067D9P6_SAPPC (5-formyltetrahydrofolate cyclo-ligase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D9P6_SAPPC) HSP 1 Score: 172 bits (437), Expect = 2.450e-49 Identity = 92/202 (45.54%), Postives = 125/202 (61.88%), Query Frame = 2
Query: 206 VRATKAGLRKEVKTRLKVLEADDIARASASIAQRLSDVPGIADAEAVSVYLAMAKEAQTNLILADLFARGKKVYIPRIMGPDPADMRMFPLASLAEIESFPSTKWGIPEPSAELVLSRE--DGVVAGDIDVVVAPGCAFDAACNRLGHGKGYYDCFLRRAEEVRRVLGRPRAAVVGIGLDEQLLEAVPTSAHDVSLDAVVTP 805
VR+ KA LRK + L+ L D++ S ++AQ + + A +VSVYLAM EA+T+ ++ LFA GK+VY+P+++G DM M + S E+ +FP +KWGIPEP + L R D + A D+D+V+ PG AFD CNRLGHGKGYYDCFL R G +GI L+ Q+++AVPTS HD LD V TP
Sbjct: 5 VRSQKAVLRKHIAGLLRALSRDEVVAQSEALAQHVVALDVFRHARSVSVYLAMEAEAKTSTLVDALFAAGKRVYVPKVIGAKSEDMVMLRVDSATEMATFPKSKWGIPEPPSSLPSGRPRIDALDALDVDIVLVPGVAFDPRCNRLGHGKGYYDCFLERYASRN---GGKLPVTIGIALEAQIVDAVPTSGHDKMLDMVATP 203
BLAST of mRNA_P-wetherbeei_contig5942.2.1 vs. uniprot
Match: A0A024UKC7_9STRA (5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKC7_9STRA) HSP 1 Score: 172 bits (435), Expect = 4.880e-49 Identity = 92/202 (45.54%), Postives = 125/202 (61.88%), Query Frame = 2
Query: 206 VRATKAGLRKEVKTRLKVLEADDIARASASIAQRLSDVPGIADAEAVSVYLAMAKEAQTNLILADLFARGKKVYIPRIMGPDPADMRMFPLASLAEIESFPSTKWGIPEPSAELVLS--REDGVVAGDIDVVVAPGCAFDAACNRLGHGKGYYDCFLRRAEEVRRVLGRPRAAVVGIGLDEQLLEAVPTSAHDVSLDAVVTP 805
VRA K LRK++ +L+ L AD+IA ASA + L P A+ V YL M EA T+ I+ ++FA+GKK+Y+P++ GP DM M +AS +I++FP +KW IPEP E R+ + D+D+++ PG AFD CNRLGHGKGYYDCF R L P ++G+ L EQ++ VPT HD +LDAVVTP
Sbjct: 4 VRALKKALRKDIDQKLRQLTADEIAEASAQLTAHLIQHPAFVMAKTVCAYLPMPNEASTSGIIDEIFAQGKKLYVPKVTGPRSEDMVMLHVASQRDIDAFPKSKWNIPEPWFEHPHGGLRDSALDEVDLDLILVPGVAFDGQCNRLGHGKGYYDCFFDRYASKTNGLLPP---MLGVALAEQIVSRVPTCEHDKALDAVVTP 202
BLAST of mRNA_P-wetherbeei_contig5942.2.1 vs. uniprot
Match: A0A485KPN3_9STRA (5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KPN3_9STRA) HSP 1 Score: 172 bits (435), Expect = 7.210e-49 Identity = 96/203 (47.29%), Postives = 134/203 (66.01%), Query Frame = 2
Query: 206 VRATKAGLRKEVKTRLKVLEADDIARASASIAQRLSDVPGIADAEAVSVYLAMAKEAQTNLILADLFARGKKVYIPRIMGPDPADMRMFPLASLAEIESFPSTKWGIPEPSAELV--LSREDGVVAGDIDVVVAPGCAFDAACNRLGHGKGYYDCFLRR-AEEVRRVLGRPRAAVVGIGLDEQLLEAVPTSAHDVSLDAVVTP 805
V+ K LRK++ +LK + +DIA ASA++ + L +P A++V YLAM EA T+ IL ++FA+GK++Y+P++ G + DM M + S A+IESFP +KW IPEP+ L L+R + + D+D+++ PG AFDA+CNRLGHGKGYYD F R A + L A VGI L QL+++VPTSAHD LD VVTP
Sbjct: 18 VKTLKKTLRKDIDHQLKHMAREDIAAASANLQRHLVTLPEFIRAKSVCAYLAMPNEASTDTILREIFAQGKQLYVPKVTGGNSEDMLMLRVESEADIESFPKSKWNIPEPALLLPSGLARLNALDTLDVDLIIVPGVAFDASCNRLGHGKGYYDSFFERYAAKADGHL----PATVGIALALQLVDSVPTSAHDRVLDMVVTP 216 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5942.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5942.2.1 >prot_P-wetherbeei_contig5942.2.1 ID=prot_P-wetherbeei_contig5942.2.1|Name=mRNA_P-wetherbeei_contig5942.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=248bp MPFRPFLISQLIAVRSASSNSNSGVLMASDPDALVRATKAGLRKEVKTRLback to top mRNA from alignment at P-wetherbeei_contig5942:471..1637- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5942.2.1 ID=mRNA_P-wetherbeei_contig5942.2.1|Name=mRNA_P-wetherbeei_contig5942.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1167bp|location=Sequence derived from alignment at P-wetherbeei_contig5942:471..1637- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5942:471..1637- >mRNA_P-wetherbeei_contig5942.2.1 ID=mRNA_P-wetherbeei_contig5942.2.1|Name=mRNA_P-wetherbeei_contig5942.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig5942:471..1637- (Phaeothamnion wetherbeei SAG_119_79)back to top |