mRNA_P-wetherbeei_contig58921.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58921.1.1 vs. uniprot
Match: A0A261GJJ3_9GAMM (Carbon monoxide dehydrogenase maturation protein n=2 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GJJ3_9GAMM) HSP 1 Score: 146 bits (368), Expect = 6.070e-40 Identity = 80/181 (44.20%), Postives = 103/181 (56.91%), Query Frame = 1
Query: 1 WRRDGHRTALATLVFVDGSAPRPRGSQMAIREDGMAVGNLTGGCAEAAIIAEAQHCLTSGANRIVRYGKDSPYIDIRLPCGSGIDVFFDITLSDDDLAQVLNANAARAPASLVFDLEHLTT--------------HVEADIRTIDTAAQWARVCEPSVRIWAVGKGPLVPLIAQLGSAAEF 501
W +G+R AL TLV +DGS+PRP GSQMA+REDG VG ++GGC EAA++ E L+ G NR +RYGKDSPY DIRLPCGSGIDV D+ +S L VL R P L D+E T+ H + D+ T + RV P+ R+ A G+G + + L A F
Sbjct: 11 WSAEGYRVALVTLVGIDGSSPRPLGSQMAVREDGRYVGLISGGCVEAALVHETLAALSDGRNRKLRYGKDSPYFDIRLPCGSGIDVLIDVGISSAILKAVLQYQQRREPVMLCVDVEAATSVQANPEQYLQLEPCHDQPDVATHISRDTLNRVYRPTTRVLAFGRGEIFRQLVNLAPAVGF 191
BLAST of mRNA_P-wetherbeei_contig58921.1.1 vs. uniprot
Match: Q2SLM6_HAHCH (CO dehydrogenase maturation factor n=4 Tax=Hahella TaxID=158481 RepID=Q2SLM6_HAHCH) HSP 1 Score: 144 bits (363), Expect = 3.300e-39 Identity = 81/178 (45.51%), Postives = 105/178 (58.99%), Query Frame = 1
Query: 1 WRRDGHRTALATLVFVDGSAPRPRGSQMAIREDGMAVGNLTGGCAEAAIIAEAQHCLTSGANRIVRYGKDSPYIDIRLPCGSGIDVFFDITLSDDDLAQVLNANAARAPASLVFDLE--------HLTTHVEADIRTIDTAA---QWARVCEPSVRIWAVGKGPLVPLIAQLGSAAEF 501
W G R AL TLV VDGS+PRP GSQMA+REDG+A+G ++GGC EAA+ EA L G NR++RYGKDSP+ DIRLPCGSGIDV D+ + D L V + R P L DLE HL + ++ D+ A ++ RV P+ R+ A G+G + + L A F
Sbjct: 17 WLAQGARVALITLVGVDGSSPRPLGSQMAVREDGVAIGLISGGCVEAALTHEAAAALADGRNRMLRYGKDSPFFDIRLPCGSGIDVLIDVNVGADLLFAVRDRQLQRQPTLLCMDLERAASGDGVHLQLEACSGMQASDSYANGDRFVRVYNPTTRLLAFGRGEIFRQLLMLTPAMGF 194
BLAST of mRNA_P-wetherbeei_contig58921.1.1 vs. uniprot
Match: A0A0F5LWE2_9HYPH (Uncharacterized protein n=2 Tax=Devosia limi DSM 17137 TaxID=1121477 RepID=A0A0F5LWE2_9HYPH) HSP 1 Score: 144 bits (362), Expect = 5.220e-39 Identity = 76/164 (46.34%), Postives = 107/164 (65.24%), Query Frame = 1
Query: 13 GHRTALATLVFVDGSAPRPRGSQMAIREDGMAVGNLTGGCAEAAIIAEAQHCLTSGANRIVRYGKDSPYIDIRLPCGSGIDVFFDITLSDDDLAQVLNANAARAPASLVFDLEHLTTHVEAD-IRTIDTAAQWARVCEPSVRIWAVGKGPLVPLIAQLGSAAEF 501
G R AL TLV VDGS+PRP GSQMA+ EDG A+GN+TGGCAEAAI+ EA + + +NR +RYGK SPY DIRLPCGSGI+++ + + + + AR P +LV D + +E + + + A++ + EP+ RI A+GKG ++ + QLG+ A F
Sbjct: 23 GMRVALVTLVEVDGSSPRPLGSQMAVAEDGSAIGNITGGCAEAAIVTEALVAIEAQSNRRIRYGKGSPYFDIRLPCGSGIEIYINARIDPELIMAAAERLQARQPVTLVQDTRAHRSWLETGPVVSPEAKAEYRKHYEPARRIVAIGKGAILGSLCQLGAMAGF 186
BLAST of mRNA_P-wetherbeei_contig58921.1.1 vs. uniprot
Match: E8RTU7_ASTEC (Uncharacterized protein n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / KCTC 12464 / NCIMB 9791 / VKM B-1370 / CB 48) TaxID=573065 RepID=E8RTU7_ASTEC) HSP 1 Score: 142 bits (357), Expect = 1.650e-38 Identity = 74/167 (44.31%), Postives = 102/167 (61.08%), Query Frame = 1
Query: 1 WRRDGHRTALATLVFVDGSAPRPRGSQMAIREDGMAVGNLTGGCAEAAIIAEAQHCLTSGANRIVRYGKDSPYIDIRLPCGSGIDVFFDITLSDDDLAQVLNANAARAPASLVFDLEHLTTHVEADIRTIDTAAQWARVCEPSVRIWAVGKGPLVPLIAQLGSAAEF 501
WRR+G +TAL TLV +DGS+PRP GSQ+A+ EDG AVG +TGGCAE A++ +A + G N + RYG+ S + DI LPCGSGI V FD+TLSD+ +A + A R A V+D + R+ P R+ +G+GP+VP +AQ+ +EF
Sbjct: 23 WRREGLKTALLTLVAIDGSSPRPVGSQIAVAEDGRAVGAITGGCAEQALVRDALSAIARGCNHVERYGEGSRFRDIVLPCGSGISVAFDVTLSDEAVAGLRTARQQRREAVYVWD------------------GGFERLYRPQPRVLVMGQGPIVPFLAQMACLSEF 171
BLAST of mRNA_P-wetherbeei_contig58921.1.1 vs. uniprot
Match: UPI0019D2E499 (XdhC family protein n=1 Tax=Pelagibacterium montanilacus TaxID=2185280 RepID=UPI0019D2E499) HSP 1 Score: 141 bits (355), Expect = 4.360e-38 Identity = 75/168 (44.64%), Postives = 108/168 (64.29%), Query Frame = 1
Query: 7 RDGHRTALATLVFVDGSAPRPRGSQMAIREDGMAVGNLTGGCAEAAIIAEAQHCLTSGANRIVRYGKDSPYIDIRLPCGSGIDVFFDITLSDDDLAQVLNANAARAPASLVFDLEHLTTHVE---ADIRTIDTAAQWARVCEPSVRIWAVGKGPLVPLIAQLGSAAEF 501
R G TAL TLV +DGS+PRP GSQMA+ EDG AVGN+TGGCAEAAI+AEA + G +R VRYG+ SPY D+RLPCGSGI+++ ++++S + + A RAP +L+ ++ T ++ AD + +AR P R+ +G+GP+V + L S ++
Sbjct: 9 RAGKSTALVTLVAIDGSSPRPLGSQMAVCEDGTAVGNITGGCAEAAIVAEAVQAMDEGRDRRVRYGEGSPYFDVRLPCGSGIEIYINVSVSRATIEALDTAVVQRAPTTLIQNVSTGETELKPGSADCGFDPEGSLFARPFLPVPRLVVIGRGPVVTSLVHLASGLDW 176
BLAST of mRNA_P-wetherbeei_contig58921.1.1 vs. uniprot
Match: A0A3S0RX55_HYPSQ (XdhC family protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A3S0RX55_HYPSQ) HSP 1 Score: 140 bits (353), Expect = 1.420e-37 Identity = 76/165 (46.06%), Postives = 103/165 (62.42%), Query Frame = 1
Query: 1 WRRDGHRTALATLVFVDGSAPRPRGSQMAIREDGMAVGNLTGGCAEAAIIAEAQHCLTSGANRIVRYGKDSPYIDIRLPCGSGIDVFFDITLSDDDLAQVLNANAARAPASLVFDLEHLTTHVEADI------RTIDTAAQWARVCEPSVRIWAVGKGPLVPLIA 477
W+ +G RTAL TLV VDG APR G+QMA+ EDG VG L+GGC EAA++ EAQ + +G NR+VRYGK SPY D++LPCGSG+D++FD L + Q+L+ AAR SL L T+ V + + R+ + R P +R+ +G GPL+ IA
Sbjct: 27 WQNEGLRTALVTLVGVDGGAPRQPGAQMAVAEDGSFVGYLSGGCLEAAVVLEAQAAIRAGENRLVRYGKGSPYFDVKLPCGSGLDLYFDQGLGAGQVRQLLSLRAARQACSLRTSLVDGTSIVASAVSQGPLPRSARDKEHFDRYYSPPLRLLLLGSGPLLNAIA 191
BLAST of mRNA_P-wetherbeei_contig58921.1.1 vs. uniprot
Match: A0A218PNM8_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. GJ21 TaxID=113574 RepID=A0A218PNM8_9HYPH) HSP 1 Score: 137 bits (344), Expect = 3.010e-36 Identity = 73/170 (42.94%), Postives = 104/170 (61.18%), Query Frame = 1
Query: 1 WRRDGHRTALATLVFVDGSAPRPRGSQMAIREDGMAVGNLTGGCAEAAIIAEAQHCLTSGANRIVRYGKDSPYIDIRLPCGSGIDVFFDITLSDDDLAQVLNANAARAPASLVFDLEHLTTHVEADI-----RTIDTAAQWARVCEPSVRIWAVGKGPLVPLIAQLGSAA 495
W+ +G RTAL TLV V+G APR G+QMA+ EDG G L+GGC EAA++ EAQ + +G NR++RYGK SPY D+RL CGSG+D++FD L + ++L+ A R +SL L T+ V + +++ + R PSVR+ +G GPLV IA + +
Sbjct: 27 WQSEGQRTALVTLVGVEGGAPREPGAQMAVAEDGRFAGYLSGGCLEAAVVLEAQAVIRAGENRLIRYGKGSPYFDVRLSCGSGLDLYFDQGLGAAQVRELLHCRATRRASSLRTSLVDGTSIVTSGSSGTLPKSVRQGQYFTRHYPPSVRLLLLGSGPLVNAIAAMAKVS 196
BLAST of mRNA_P-wetherbeei_contig58921.1.1 vs. uniprot
Match: A0A520XN83_9ACTN (XdhC family protein n=2 Tax=Bacteria TaxID=2 RepID=A0A520XN83_9ACTN) HSP 1 Score: 134 bits (337), Expect = 2.710e-35 Identity = 76/165 (46.06%), Postives = 103/165 (62.42%), Query Frame = 1
Query: 7 RDGHRTALATLVFVDGSAPRPRGSQMAIREDGMAVGNLTGGCAEAAIIAEAQHCLTSGANRIVRYGKDSPYIDIRLPCGSGIDVFFDITLSDDDLAQVLNANAARAPASLVFDLEHLTTHVEA-DIRTIDTAAQ-WARVCEPSVRIWAVGKGPLVPLIAQLGSAA 495
R G + LATLV +DGSAPRP GSQ+A+ +DG A G +TGGCAEA+I+AEA + G NR+VRYG+ SPY DI LPCGSGIDV+FD + +A +L R P +L ++ + T+ + R AQ + R P +++ GKGP+VP +A L A
Sbjct: 18 RSGCKMCLATLVGIDGSAPRPLGSQIAVADDGDAQGYITGGCAEASIVAEALRLIELGENRLVRYGEGSPYKDIALPCGSGIDVYFDTKIEPGLVAGILENLETRQPVALASNIANGTSQAAPYESRLPVLIAQIFTRPYVPHFQLFIAGKGPVVPALANLAHHA 182
BLAST of mRNA_P-wetherbeei_contig58921.1.1 vs. uniprot
Match: A0A351CYZ9_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A351CYZ9_9GAMM) HSP 1 Score: 132 bits (331), Expect = 1.580e-34 Identity = 70/167 (41.92%), Postives = 101/167 (60.48%), Query Frame = 1
Query: 1 WRRDGHRTALATLVFVDGSAPRPRGSQMAIREDGMAVGNLTGGCAEAAIIAEAQHCLTSGANRIVRYGKDSPYIDIRLPCGSGIDVFFDITLSDDDLAQVLNANAARAPASLVFDLEHLTTHVEADIRTIDTAAQWARVCEPSVRIWAVGKGPLVPLIAQLGSAAEF 501
W AL TLV GS+PR GSQ+A+ G +VG+++GGCAE+AI+ A + N ++R+G+DSPY+DIRLPCGS IDVFF++ L DD Q+L+ A R+PA + F+L+ T+ + I +D A + P+ +I G GP+VP + L EF
Sbjct: 15 WLSQEEDVALVTLVATLGSSPRRVGSQIAVSGAGDSVGSISGGCAESAIVELALEAIGKQENNLIRFGEDSPYLDIRLPCGSSIDVFFEVGLGHDDFTQILDKMAIRSPAYMAFNLQDRTSQLVEQI--VD--ADYLHTYHPTTQIVVAGNGPIVPALVGLCDLLEF 177
BLAST of mRNA_P-wetherbeei_contig58921.1.1 vs. uniprot
Match: F8J6M7_HYPSM (Uncharacterized protein n=2 Tax=Hyphomicrobium TaxID=81 RepID=F8J6M7_HYPSM) HSP 1 Score: 131 bits (330), Expect = 4.120e-34 Identity = 72/172 (41.86%), Postives = 104/172 (60.47%), Query Frame = 1
Query: 1 WRRDGHRTALATLVFVDGSAPRPRGSQMAIREDGMAVGNLTGGCAEAAIIAEAQHCLTSGANRIVRYGKDSPYIDIRLPCGSGIDVFFDITLSDDDLAQVLNANAARAPASLVFDLEHLTTHVEADIRTIDTAAQ-----WARVCEPSVRIWAVGKGPLVPLIAQLGSAAEF 501
WRR G + AL TLV ++G +PR GS MA+ +G VG L+GGC E+A+ EAQ C+ G N++VRYG+ SPY D++LPCGSGIDVF D D + +++ AN R S V +LE + V+ ++ A+Q + R P+V++ +G GP + IA L S+ F
Sbjct: 34 WRRMGLKCALVTLVNIEGGSPRALGSMMAVSSEGHYVGYLSGGCLESAVAMEAQLCIRDGQNKLVRYGRGSPYFDVQLPCGSGIDVFIDQAPDDRIIERLMEANRNREFVSHVTNLETGESQVDRLPGALEIASQRDGPFFRRTVIPTVKVHLIGAGPSMAAIAHLLSSIGF 205 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58921.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58921.1.1 >prot_P-wetherbeei_contig58921.1.1 ID=prot_P-wetherbeei_contig58921.1.1|Name=mRNA_P-wetherbeei_contig58921.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp WRRDGHRTALATLVFVDGSAPRPRGSQMAIREDGMAVGNLTGGCAEAAIIback to top mRNA from alignment at P-wetherbeei_contig58921:1..501+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58921.1.1 ID=mRNA_P-wetherbeei_contig58921.1.1|Name=mRNA_P-wetherbeei_contig58921.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig58921:1..501+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58921:1..501+ >mRNA_P-wetherbeei_contig58921.1.1 ID=mRNA_P-wetherbeei_contig58921.1.1|Name=mRNA_P-wetherbeei_contig58921.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig58921:1..501+ (Phaeothamnion wetherbeei SAG_119_79)back to top |