mRNA_P-wetherbeei_contig58870.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58870.1.1 vs. uniprot
Match: A0A6I1J9B0_9HYPH (Uncharacterized protein n=1 Tax=Xanthobacteraceae bacterium TaxID=2021379 RepID=A0A6I1J9B0_9HYPH) HSP 1 Score: 57.0 bits (136), Expect = 6.060e-9 Identity = 23/33 (69.70%), Postives = 26/33 (78.79%), Query Frame = 1
Query: 7 TLSIFNSIWWSQTGSNRRPHACKARALPAELWP 105
T+ + S+WWSQ GSNRRP AC A ALPAELWP
Sbjct: 36 TIRLGASVWWSQAGSNRRPLACHASALPAELWP 68
BLAST of mRNA_P-wetherbeei_contig58870.1.1 vs. uniprot
Match: A0A8J4VFY4_9ROSI (Uncharacterized protein n=1 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4VFY4_9ROSI) HSP 1 Score: 55.5 bits (132), Expect = 4.780e-8 Identity = 23/25 (92.00%), Postives = 23/25 (92.00%), Query Frame = 1
Query: 31 WWSQTGSNRRPHACKARALPAELWP 105
WW QTGSNRRPHACKARALPAEL P
Sbjct: 197 WWRQTGSNRRPHACKARALPAELCP 221
BLAST of mRNA_P-wetherbeei_contig58870.1.1 vs. uniprot
Match: A0A218PLN4_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobium sp. GJ21 TaxID=113574 RepID=A0A218PLN4_9HYPH) HSP 1 Score: 52.0 bits (123), Expect = 7.460e-8 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 2
Query: 32 GGARRDRTDDLMLAKHALSQLSYG 103
GGARRDRTDDLMLAKHALSQLSYG
Sbjct: 17 GGARRDRTDDLMLAKHALSQLSYG 40
BLAST of mRNA_P-wetherbeei_contig58870.1.1 vs. uniprot
Match: A0A7U6Y4X3_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium LM-1 TaxID=2682548 RepID=A0A7U6Y4X3_9PROT) HSP 1 Score: 51.6 bits (122), Expect = 9.870e-8 Identity = 23/24 (95.83%), Postives = 24/24 (100.00%), Query Frame = -3
Query: 32 AIAQLGERVLCKHEVVGSIPSGST 103
A+AQLGERVLCKHEVVGSIPSGST
Sbjct: 10 AVAQLGERVLCKHEVVGSIPSGST 33
BLAST of mRNA_P-wetherbeei_contig58870.1.1 vs. uniprot
Match: A0A183CP88_GLOPA (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A183CP88_GLOPA) HSP 1 Score: 53.1 bits (126), Expect = 2.760e-7 Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 2
Query: 14 RSSIPSGGARRDRTDDLMLAKHALSQLSYG 103
R +GGARRDRTDDLMLAKHALSQLSYG
Sbjct: 72 RQPAKAGGARRDRTDDLMLAKHALSQLSYG 101
BLAST of mRNA_P-wetherbeei_contig58870.1.1 vs. uniprot
Match: A0A653Y6M5_9BURK (Uncharacterized protein n=1 Tax=Massilia sp. 9I TaxID=2653152 RepID=A0A653Y6M5_9BURK) HSP 1 Score: 49.7 bits (117), Expect = 5.950e-7 Identity = 22/28 (78.57%), Postives = 22/28 (78.57%), Query Frame = 1
Query: 22 NSIWWSQTGSNRRPHACKARALPAELWP 105
NS WW TGSNRRP ACKA ALPAEL P
Sbjct: 45 NSNWWRMTGSNRRPPACKAGALPAELIP 72
BLAST of mRNA_P-wetherbeei_contig58870.1.1 vs. uniprot
Match: A0A8J4V8U4_9ROSI (Uncharacterized protein n=1 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4V8U4_9ROSI) HSP 1 Score: 52.4 bits (124), Expect = 6.480e-7 Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 2
Query: 29 SGGARRDRTDDLMLAKHALSQLSYG 103
+GGARRDRTDDLMLAKHALSQLSYG
Sbjct: 175 NGGARRDRTDDLMLAKHALSQLSYG 199
BLAST of mRNA_P-wetherbeei_contig58870.1.1 vs. uniprot
Match: A0A1Q9C0X1_SYMMI (Uncharacterized protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9C0X1_SYMMI) HSP 1 Score: 52.4 bits (124), Expect = 7.080e-7 Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 2
Query: 29 SGGARRDRTDDLMLAKHALSQLSYG 103
+GGARRDRTDDLMLAKHALSQLSYG
Sbjct: 204 TGGARRDRTDDLMLAKHALSQLSYG 228
BLAST of mRNA_P-wetherbeei_contig58870.1.1 vs. uniprot
Match: B1N6K1_9PROT (Uncharacterized protein n=1 Tax=uncultured beta proteobacterium CBNPD1 BAC clone 578 TaxID=417305 RepID=B1N6K1_9PROT) HSP 1 Score: 48.1 bits (113), Expect = 5.190e-6 Identity = 21/31 (67.74%), Postives = 22/31 (70.97%), Query Frame = 1
Query: 13 SIFNSIWWSQTGSNRRPHACKARALPAELWP 105
S+ WW TGSNRRP ACKA ALPAEL P
Sbjct: 26 SVVTLRWWRMTGSNRRPPACKAGALPAELIP 56
BLAST of mRNA_P-wetherbeei_contig58870.1.1 vs. uniprot
Match: A0A2N9AVJ8_METEX (Uncharacterized protein n=1 Tax=Methylorubrum extorquens TaxID=408 RepID=A0A2N9AVJ8_METEX) HSP 1 Score: 47.8 bits (112), Expect = 5.310e-6 Identity = 20/25 (80.00%), Postives = 21/25 (84.00%), Query Frame = 1
Query: 31 WWSQTGSNRRPHACKARALPAELWP 105
WW +TGSNRRP ACKA ALPAEL P
Sbjct: 39 WWRRTGSNRRPDACKATALPAELRP 63 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58870.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58870.1.1 >prot_P-wetherbeei_contig58870.1.1 ID=prot_P-wetherbeei_contig58870.1.1|Name=mRNA_P-wetherbeei_contig58870.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=35bp QGTLSIFNSIWWSQTGSNRRPHACKARALPAELWPback to top mRNA from alignment at P-wetherbeei_contig58870:135..239- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58870.1.1 ID=mRNA_P-wetherbeei_contig58870.1.1|Name=mRNA_P-wetherbeei_contig58870.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=105bp|location=Sequence derived from alignment at P-wetherbeei_contig58870:135..239- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58870:135..239- >mRNA_P-wetherbeei_contig58870.1.1 ID=mRNA_P-wetherbeei_contig58870.1.1|Name=mRNA_P-wetherbeei_contig58870.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=105bp|location=Sequence derived from alignment at P-wetherbeei_contig58870:135..239- (Phaeothamnion wetherbeei SAG_119_79)back to top |